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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0240500-00
CDS Infomation

cds chromosome:IRGSP-1.0:8:8488370:8489782:1 gene:Os08g0240500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:XYLOGLUCAN ENDOTRANSGLUCOSYDASE/HYDROLASE 4 description:Glycoside hydrolase, family 16 domain containing protein. (Os08t0240500-00)
Sequence

ATGGGGCAGGCTAGGGCTCACCTCCTAGCCTCCCTGTGGGCTTTCTACCTCATCCTAGCA
ATCTCCATGGTCACTGGCGACCTCACCAATGACCTCGACATACTGTGGGGAAACTCAAAG
GTGTTCTATGACAACTCCGGCAAACAGACTATCTCACTGACTCTTGACCGCTGGACGACC
TCCGCATTCCGGTCGAAGAGCACATACCTCTTCAGTAGGATCGACATGGACATCAAGCTC
GTTGCTGGAGACTCAGCTGGAACCGTGACTACTCTTTATGTAAGTGGCCAGGGAATGAAC
AGATTACTAATCCTTGTTGATGACAAGCTGATCCGGCAGATCAAGAACAATTTGATGTAC
AGTGTCCCGTACCCAACCTATCAGCCAATGAGGGTATATGGCAGCATCTGGAATGCCGAT
GACTGGGCAACAATGGGAGGGCGGGTGAAGACTGACTGGTCGCAGGCGCCATTCACAGCA
TACTTCCGGAACTACAGGGCTATCGCTTGCCCCCCACAACAGAGCTCCCCACTCTGCGGC
CAGAGCTCCGGAAATTGGTTCAACCAGGAGCTGGACGTGACACGGAAACAGCAACTACAG
GAGGTGGATGCCAACTACAAGATCTACGATTACTGCACTGACACCAAGAGGTTCAAAGAT
AATCTCCCCAAAGAGTGTACGATAAACTAG

Peptide Sequence

PEP ID

Os08t0240500-00
PEP Infomation

pep chromosome:IRGSP-1.0:8:8488370:8489782:1 gene:Os08g0240500 transcript:Os08t0240500-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:XYLOGLUCAN ENDOTRANSGLUCOSYDASE/HYDROLASE 4 description:Glycoside hydrolase, family 16 domain containing protein. (Os08t0240500-00)
Sequence

MGQARAHLLASLWAFYLILAISMVTGDLTNDLDILWGNSKVFYDNSGKQTISLTLDRWTT
SAFRSKSTYLFSRIDMDIKLVAGDSAGTVTTLYVSGQGMNRLLILVDDKLIRQIKNNLMY
SVPYPTYQPMRVYGSIWNADDWATMGGRVKTDWSQAPFTAYFRNYRAIACPPQQSSPLCG
QSSGNWFNQELDVTRKQQLQEVDANYKIYDYCTDTKRFKDNLPKECTIN

Transcript Sequence

Transcript ID

Os08t0240500-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:8488370:8489782:1 gene:Os08g0240500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:XYLOGLUCAN ENDOTRANSGLUCOSYDASE/HYDROLASE 4 description:Glycoside hydrolase, family 16 domain containing protein. (Os08t0240500-00)
Sequence

ATGGGGCAGGCTAGGGCTCACCTCCTAGCCTCCCTGTGGGCTTTCTACCTCATCCTAGCA
ATCTCCATGGTCACTGGCGACCTCACCAATGACCTCGACATACTGTGGGGAAACTCAAAG
GTGTTCTATGACAACTCCGGCAAACAGACTATCTCACTGACTCTTGACCGCTGGACGACC
TCCGCATTCCGGTCGAAGAGCACATACCTCTTCAGTAGGATCGACATGGACATCAAGCTC
GTTGCTGGAGACTCAGCTGGAACCGTGACTACTCTTTATGTAAGTGGCCAGGGAATGAAC
AGATTACTAATCCTTGTTGATGACAAGCTGATCCGGCAGATCAAGAACAATTTGATGTAC
AGTGTCCCGTACCCAACCTATCAGCCAATGAGGGTATATGGCAGCATCTGGAATGCCGAT
GACTGGGCAACAATGGGAGGGCGGGTGAAGACTGACTGGTCGCAGGCGCCATTCACAGCA
TACTTCCGGAACTACAGGGCTATCGCTTGCCCCCCACAACAGAGCTCCCCACTCTGCGGC
CAGAGCTCCGGAAATTGGTTCAACCAGGAGCTGGACGTGACACGGAAACAGCAACTACAG
GAGGTGGATGCCAACTACAAGATCTACGATTACTGCACTGACACCAAGAGGTTCAAAGAT
AATCTCCCCAAAGAGTGTACGATAAACTAG