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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0239000-01
CDS Infomation

cds chromosome:IRGSP-1.0:8:8424284:8425290:1 gene:Os08g0239000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Complex 1 LYR protein family protein. (Os08t0239000-01)
Sequence

ATGGCAGTGGCACCGACGAGAGCGGAGGCACTGTCCCTCTTCCGGTCCCTCCTCCGCACG
GCAAGGCAGTTCTCTGACTACAACATCCGCGAGTACACGCGCCGCCGCGCCGCGGACGCC
TTCCGTGAGAACCGTGCCCTCGGCGACACGGCTGCCGCGGCGGCAGCATTCGCGGACGGG
AAGAAGCAGCTGGAGGTGGCAAAGCGGCAGGCGGTGGTGTACTCTCTGTACGCCCCAAAG
GCCAAGAGCATCATGGAGATGAAGTTGCAGTGA

Peptide Sequence

PEP ID

Os08t0239000-01
PEP Infomation

pep chromosome:IRGSP-1.0:8:8424284:8425290:1 gene:Os08g0239000 transcript:Os08t0239000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Complex 1 LYR protein family protein. (Os08t0239000-01)
Sequence

MAVAPTRAEALSLFRSLLRTARQFSDYNIREYTRRRAADAFRENRALGDTAAAAAAFADG
KKQLEVAKRQAVVYSLYAPKAKSIMEMKLQ

Transcript Sequence

Transcript ID

Os08t0239000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:8424284:8425290:1 gene:Os08g0239000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Complex 1 LYR protein family protein. (Os08t0239000-01)
Sequence

GCATTCTTGTTGTGTGTGGTTCAGGTTCAGGTTCAGGGGCATCTCTCCTCTTTTCTTTCC
CTTGCCGCCATTAGCCCAAGCAGCTATCTGGATTCTGGAGAGTTGTTCTCTGGTACTAGT
TCTCTAGCGCACGAACAACATCCGCGACGAAGCGCATCCATGGCAGTGGCACCGACGAGA
GCGGAGGCACTGTCCCTCTTCCGGTCCCTCCTCCGCACGGCAAGGCAGTTCTCTGACTAC
AACATCCGCGAGTACACGCGCCGCCGCGCCGCGGACGCCTTCCGTGAGAACCGTGCCCTC
GGCGACACGGCTGCCGCGGCGGCAGCATTCGCGGACGGGAAGAAGCAGCTGGAGGTGGCA
AAGCGGCAGGCGGTGGTGTACTCTCTGTACGCCCCAAAGGCCAAGAGCATCATGGAGATG
AAGTTGCAGTGATCGACGCGAGAGGTTTCGTGCTCTCTTGCTTGCTGTCCTCTTACTCAG
GATTTCTTTCTGCTCTGTTTCTAAAGTTATGTGATAGGTTCGAGGAAAATTGGTGCAATC
AAAGCTGAGATGTTATCATGTTTGCTGGATAATTGCCATGACATGGTTGCTATGAGTTGA
ATAAATCAGTCAATTCCACGATTTTGGTCTCTTGTGTTCAACATACCATTACCTGTTAAC
TGTGGTTGGATTGGTGCCGATTGCAGCACTTCGACCAGGGCTCCTCGTTGCTGCTGGGGT
CCCTCGTCCTGTTGCCGGCTTGCAGCCACCAGTCACCGTTGCTGGTGGTGGTGCCTTGTA
CCTGCTGCTCTCCGTCCTGATGGCCATGGCCTTCGTCCCACTGGACGAGCTAAGAGATCT
AGTGCATCTGTTCTGAATTTTTCAGGACGGTTCATGTGTCCTGTATTGTTCTATGCTATG
TGTTCCCATTTTTGTTTTTGTTGTATGCTATGACATTGTTGCTGCTCTGATCTTTTTTTT
TTTCTGAAATAATGAAGATAAGCTTGCTAGTATTTGCTTTTTGGGCT