Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0238200-02
CDS Infomation	cds chromosome:IRGSP-1.0:8:8394312:8397823:1 gene:Os08g0238200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Dienelactone hydrolase domain containing protein. (Os08t0238200-01);Similar to Retrotransposon protein Ty1-copia subclass. (Os08t0238200-02)
Sequence	ATGCAAGCTAAACCCATCACCATGGCAACGGCGTCGATGCTCCTCCGGAGCCTCCTCTGC CTCGCCGTGCTCGCCGCGGCCGCGGCCGCCGCTCAGCCGCGGTTGCAGTGCCTGGAGAAC CCGCCGGAGCTGACGGCCGCCGGCGACGGCGAGGCCGGCGTGGTCGTCCAAAACCTGGGA GGATTCGCGGCCTACGTCACCGGCGCCGCCCACTCCGGCCGGGCCATCGTCCTCGCCTCC GACGTCTTTGGATTTGAAGCACCATTGCTGAGGAAAATAGCTGACAAAGTTGGTGAAGCG GGATATTACGTCGTGGTGCCAGATTTCTTCCAAGGGCGACCTTACAATGGAGACCCAAGT ATAAACATTACACAATGGATCATGGCTCACTCTCCGGTGAAGGCAGCTGAAGATTCTAAA CCGATCTTTGCTGCTCTAAAAAGAGAAGGGAAATCTGTTGTTGGAGTTGGAGGTTATTGT TGGGGCGGAAAGTTAGCTGTCGAGGTTGCGAAAACCAATGAGGTTGGAGCGATTGTCATC TCCCATCCTTCATCGGTGACTGCTGATGATATGAAAGATGTCAAATGCCCCATTGAAATC CTTGGAGCTGAGAATGACGCTGTAACACCACCAAGATTAGTGTACCAGTTTGTGAATGCC TTGCGCCAAAGACCTGAGGTTGATTACTTTGCCAGGATCTTTCCAGGAGTGGCTCATGGC TTTGCTTGCAGATATAACGCCAGCAACCCGTTTGCTGTCAGAACTGCTGAACAATCTCTT GCCTTAATGCTTGACTGGTTTGAGAAACACTTGAAATGA

Peptide Sequence

PEP ID	Os08t0238200-02
PEP Infomation	pep chromosome:IRGSP-1.0:8:8394312:8397823:1 gene:Os08g0238200 transcript:Os08t0238200-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Dienelactone hydrolase domain containing protein. (Os08t0238200-01);Similar to Retrotransposon protein Ty1-copia subclass. (Os08t0238200-02)
Sequence	MQAKPITMATASMLLRSLLCLAVLAAAAAAAQPRLQCLENPPELTAAGDGEAGVVVQNLG GFAAYVTGAAHSGRAIVLASDVFGFEAPLLRKIADKVGEAGYYVVVPDFFQGRPYNGDPS INITQWIMAHSPVKAAEDSKPIFAALKREGKSVVGVGGYCWGGKLAVEVAKTNEVGAIVI SHPSSVTADDMKDVKCPIEILGAENDAVTPPRLVYQFVNALRQRPEVDYFARIFPGVAHG FACRYNASNPFAVRTAEQSLALMLDWFEKHLK

Transcript Sequence

Transcript ID	Os08t0238200-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:8394312:8397823:1 gene:Os08g0238200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Dienelactone hydrolase domain containing protein. (Os08t0238200-01);Similar to Retrotransposon protein Ty1-copia subclass. (Os08t0238200-02)
Sequence	ATGCAAGCTAAACCCATCACCATGGCAACGGCGTCGATGCTCCTCCGGAGCCTCCTCTGC CTCGCCGTGCTCGCCGCGGCCGCGGCCGCCGCTCAGCCGCGGTTGCAGTGCCTGGAGAAC CCGCCGGAGCTGACGGCCGCCGGCGACGGCGAGGCCGGCGTGGTCGTCCAAAACCTGGGA GGATTCGCGGCCTACGTCACCGGCGCCGCCCACTCCGGCCGGGCCATCGTCCTCGCCTCC GACGTCTTTGGATTTGAAGCACCATTGCTGAGGAAAATAGCTGACAAAGTTGGTGAAGCG GGATATTACGTCGTGGTGCCAGATTTCTTCCAAGGGCGACCTTACAATGGAGACCCAAGT ATAAACATTACACAATGGATCATGGCTCACTCTCCGGTGAAGGCAGCTGAAGATTCTAAA CCGATCTTTGCTGCTCTAAAAAGAGAAGGGAAATCTGTTGTTGGAGTTGGAGGTTATTGT TGGGGCGGAAAGTTAGCTGTCGAGGTTGCGAAAACCAATGAGGTTGGAGCGATTGTCATC TCCCATCCTTCATCGGTGACTGCTGATGATATGAAAGATGTCAAATGCCCCATTGAAATC CTTGGAGCTGAGAATGACGCTGTAACACCACCAAGATTAGTGTACCAGTTTGTGAATGCC TTGCGCCAAAGACCTGAGGTTGATTACTTTGCCAGGATCTTTCCAGGAGTGGCTCATGGC TTTGCTTGCAGATATAACGCCAGCAACCCGTTTGCTGTCAGAACTGCTGAACAATCTCTT GCCTTAATGCTTGACTGGTTTGAGAAACACTTGAAATGACATTAGCTAATCATGCATGCA ATGCAAGGCCAGTGCAATTGTTTATTTCCATCAAAATACATTGCTAGTGTCCATGTATAT CCTGGTGTTAAGTGAAACTTATATAAATAAGCACTAGTGTAAAGTGAAAGTATGTGTTGA ATATGGTGCGAAGTGAAACAAAGTGTACTTTATGAAGTGCAAAATGCAAACTCTTTTTGT TCCG