Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0237000-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:8328017:8329241:1 gene:Os08g0237000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:XYLOGLUCAN ENDOTRANSGLUCOSYDASE/HYDROLASE 17 description:Xyloglucan endotransglycosylase/hydrolase protein 8 precursor (EC 2.4.1.207) (End-xyloglucan transferase) (OsXTH8) (OsXRT5). (Os08t0237000-01)
Sequence	ATGGCGAAGCATCTCGCGCTGTCCGTGGCCGCCGCGGTGGCCGTGTCGTGGCTGGCGGCG TCGTCGGCGGCGGCGGCGGGGTTCTACGAGAAGTTCGACGTGGTGGGCGCCGGCGACCAC GTGAGGGTGGTGAGCGACGACGGGAAGACGCAGCAGGTGGCGCTGACGCTGGACCGGAGC TCCGGGTCCGGGTTCACCTCCAAGGACACCTACCTGTTCGGCGAGTTCAGCGTCCAGATG AAGCTCGTCGGCGGCAACTCCGCCGGCACCGTCACCTCCTTCTACCTCTCCTCCGGCGAG GGCGACGGCCACGACGAGATCGACATCGAGTTCATGGGCAACCTCAGCGGCAACCCCTAC GTCATGAACACCAACGTCTGGGCTAATGGCGACGGCAAGAAGGAGCACCAGTTCTACCTC TGGTTCGACCCCACCGCCGACTTCCACACCTACAAGATCATCTGGAATCCCCAAAACATC ATATTCCAGGTGGACGACGTGCCGGTGAGGACGTTCAAGAAGTACGACGACCTGGCGTAC CCGCAGAGCAAGCCGATGAGGCTGCACGCGACGCTGTGGGACGGCAGCTACTGGGCGACG AGGCACGGCGACGTCAAGATCGACTGGAGCGGCGCGCCGTTCGTGGTGTCGTACCGCGGG TACAGCACCAACGCGTGCGTCAACAACAATCCCGCCGGCGGGTGGTCGTCGTCGTGGTGC CCCGAGGGCACGTCGGCGTGGATCCACCGCGAGCTCGACGGCGCCGAGCTCGGCACCGTC GCGTGGGCCGAGCGCAACTACATGTCCTACAACTACTGCGCCGACGGCTGGCGCTTCCCC CAGGGCTTCCCCGCCGAGTGCTACCGCAAGTGA

Peptide Sequence

PEP ID	Os08t0237000-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:8328017:8329241:1 gene:Os08g0237000 transcript:Os08t0237000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:XYLOGLUCAN ENDOTRANSGLUCOSYDASE/HYDROLASE 17 description:Xyloglucan endotransglycosylase/hydrolase protein 8 precursor (EC 2.4.1.207) (End-xyloglucan transferase) (OsXTH8) (OsXRT5). (Os08t0237000-01)
Sequence	MAKHLALSVAAAVAVSWLAASSAAAAGFYEKFDVVGAGDHVRVVSDDGKTQQVALTLDRS SGSGFTSKDTYLFGEFSVQMKLVGGNSAGTVTSFYLSSGEGDGHDEIDIEFMGNLSGNPY VMNTNVWANGDGKKEHQFYLWFDPTADFHTYKIIWNPQNIIFQVDDVPVRTFKKYDDLAY PQSKPMRLHATLWDGSYWATRHGDVKIDWSGAPFVVSYRGYSTNACVNNNPAGGWSSSWC PEGTSAWIHRELDGAELGTVAWAERNYMSYNYCADGWRFPQGFPAECYRK

Transcript Sequence

Transcript ID	Os08t0237000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:8328017:8329241:1 gene:Os08g0237000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:XYLOGLUCAN ENDOTRANSGLUCOSYDASE/HYDROLASE 17 description:Xyloglucan endotransglycosylase/hydrolase protein 8 precursor (EC 2.4.1.207) (End-xyloglucan transferase) (OsXTH8) (OsXRT5). (Os08t0237000-01)
Sequence	ACTCATCCACCACCCAAAGACAAAGCAAGCAAGTACAGTAGCCATGGCGAAGCATCTCGC GCTGTCCGTGGCCGCCGCGGTGGCCGTGTCGTGGCTGGCGGCGTCGTCGGCGGCGGCGGC GGGGTTCTACGAGAAGTTCGACGTGGTGGGCGCCGGCGACCACGTGAGGGTGGTGAGCGA CGACGGGAAGACGCAGCAGGTGGCGCTGACGCTGGACCGGAGCTCCGGGTCCGGGTTCAC CTCCAAGGACACCTACCTGTTCGGCGAGTTCAGCGTCCAGATGAAGCTCGTCGGCGGCAA CTCCGCCGGCACCGTCACCTCCTTCTACCTCTCCTCCGGCGAGGGCGACGGCCACGACGA GATCGACATCGAGTTCATGGGCAACCTCAGCGGCAACCCCTACGTCATGAACACCAACGT CTGGGCTAATGGCGACGGCAAGAAGGAGCACCAGTTCTACCTCTGGTTCGACCCCACCGC CGACTTCCACACCTACAAGATCATCTGGAATCCCCAAAACATCATATTCCAGGTGGACGA CGTGCCGGTGAGGACGTTCAAGAAGTACGACGACCTGGCGTACCCGCAGAGCAAGCCGAT GAGGCTGCACGCGACGCTGTGGGACGGCAGCTACTGGGCGACGAGGCACGGCGACGTCAA GATCGACTGGAGCGGCGCGCCGTTCGTGGTGTCGTACCGCGGGTACAGCACCAACGCGTG CGTCAACAACAATCCCGCCGGCGGGTGGTCGTCGTCGTGGTGCCCCGAGGGCACGTCGGC GTGGATCCACCGCGAGCTCGACGGCGCCGAGCTCGGCACCGTCGCGTGGGCCGAGCGCAA CTACATGTCCTACAACTACTGCGCCGACGGCTGGCGCTTCCCCCAGGGCTTCCCCGCCGA GTGCTACCGCAAGTGATTTTGAACTCGATCGATTCAAATCCTCCTCCATTGATGAGTTCT TGGCAATGATTTGTAATTGCTTCTTGTTCTTGTTTTCGTCTTCGTCTTCGTCTTCTTCTT CTTGATCCATGTACATTTTGCCATCCATTCGTTCTCCATTTGTTACAGTTACAGAGACAG GTTGATGGTGAATTACTATTGCCGCCAATTTTTTTCTTCTTCTTGTT