Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0225400-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:7652630:7664411:1 gene:Os08g0225400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0113I13.9 protein. (Os08t0225400-01)
Sequence	GATTGTTTTCTAGGTCCGGTGAATTCTGAGAGAGATGAAGGTGCGGAGCTGTACTGTGAG AGGAAGAAAAGAGTGAAGTGGCATCAGCTGTGGCCATCAAGTGCCAAGGATATGAAGGTT GTTCCAGTGCCGCGTGCAAGAGCAGCTCCAAGAAGGCACATATGGATACCAGTGATTCTA ATTCTTGTTGCCGTCACCGTGCTATGGATTTACTTATACCCTCCACAGGATTATACCTAT CCTGTTAGGGATTGGTATCCTGTTAGGGACTGGTTTCCTGCAGAACCTGCCCGGGAACTG ACCGATGAGGAGACTGCCGCTCGAGTTGTCTTTAGACAAATCCTCTCAACGCCTCCATTC CCATCCAGGAACCCCAAAATCGCTTTCATGTTCTTGACTCCTGGCAAGTTGCCATTTGAG AAATTATGGGAGTTATTTTTTAAGGGCCATGAAGGGAGGTACACTATATATGTTCATGCT TCACGTGAGAAACCCGAACATGTCAGTCCTGTATTTGTTGGCCGAGACATACACAGTGAT AAGGTAGGATGGGGCATGATTTCTATGGTTGATGCAGAGAGGAGGTTGCTGGCAAAGGCC CTAGAAGATACGGACAACCAACTATTTGTTTTGCTTTCTGACAGTTGTGTTCCCCTACAC AATTTTGACTATGTGTACGACTTCTTGATGGGATCAAGACACAGTTTTCTTGACTGCTTT GATGATCCTGGGCCACATGGAGTATTTAGATACTCGAAGCATATGTTGCCAGAAGTTCGA GAGATTGATTTTAGAAAGGGCTCGCAGTGGTTCGCAATCAAGAGGCAACATGCAATGGTG GTGGTTGCGGATAGTCTGTATTACACAAAATTCAGGCGTTTCTGCAAGCCAGGAATGGAA GAGGGTCGCAATTGTTATGCAGATGAGCATTACTTGCCAACACTATTCCTTATGATGGAC CCTGCTGGAATTGCTAATTGGTCTGTGACTTATGTTGATTGGTCTGAGGGAAAGTGGCAT CCCAGGTCTTTCCGAGCTAAGGATGTAACTTATGAACTCCTCAAGAATATGACATCGGTT GACATCAGCTACCACATAACAAGTGATGAAAAGAAAGAGCTCTTGCAGAGGCCTTGCTTG TGGAATGGACTAAAGAGACCATGCTACTTGTTTGCAAGGAAGTTCTACCCAGAAACTTTG AACAATCTCATGTACTTATTCTCTAACTACACCATTTTCTAA

Peptide Sequence

PEP ID	Os08t0225400-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:7652630:7664411:1 gene:Os08g0225400 transcript:Os08t0225400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0113I13.9 protein. (Os08t0225400-01)
Sequence	DCFLGPVNSERDEGAELYCERKKRVKWHQLWPSSAKDMKVVPVPRARAAPRRHIWIPVIL ILVAVTVLWIYLYPPQDYTYPVRDWYPVRDWFPAEPARELTDEETAARVVFRQILSTPPF PSRNPKIAFMFLTPGKLPFEKLWELFFKGHEGRYTIYVHASREKPEHVSPVFVGRDIHSD KVGWGMISMVDAERRLLAKALEDTDNQLFVLLSDSCVPLHNFDYVYDFLMGSRHSFLDCF DDPGPHGVFRYSKHMLPEVREIDFRKGSQWFAIKRQHAMVVVADSLYYTKFRRFCKPGME EGRNCYADEHYLPTLFLMMDPAGIANWSVTYVDWSEGKWHPRSFRAKDVTYELLKNMTSV DISYHITSDEKKELLQRPCLWNGLKRPCYLFARKFYPETLNNLMYLFSNYTIF

Transcript Sequence

Transcript ID	Os08t0225400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:7652630:7664411:1 gene:Os08g0225400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0113I13.9 protein. (Os08t0225400-01)
Sequence	GGATCCTGCATGCGCACGCCGGGCGCTTCCCTCTCGGATCGGCCAATCGGACGCACAGAG CACTTGCAGAAGCAAGGTGGAAGCTGTGTTAAGATTGTTTTCTAGGTCCGGTGAATTCTG AGAGAGATGAAGGTGCGGAGCTGTACTGTGAGAGGAAGAAAAGAGTGAAGTGGCATCAGC TGTGGCCATCAAGTGCCAAGGATATGAAGGTTGTTCCAGTGCCGCGTGCAAGAGCAGCTC CAAGAAGGCACATATGGATACCAGTGATTCTAATTCTTGTTGCCGTCACCGTGCTATGGA TTTACTTATACCCTCCACAGGATTATACCTATCCTGTTAGGGATTGGTATCCTGTTAGGG ACTGGTTTCCTGCAGAACCTGCCCGGGAACTGACCGATGAGGAGACTGCCGCTCGAGTTG TCTTTAGACAAATCCTCTCAACGCCTCCATTCCCATCCAGGAACCCCAAAATCGCTTTCA TGTTCTTGACTCCTGGCAAGTTGCCATTTGAGAAATTATGGGAGTTATTTTTTAAGGGCC ATGAAGGGAGGTACACTATATATGTTCATGCTTCACGTGAGAAACCCGAACATGTCAGTC CTGTATTTGTTGGCCGAGACATACACAGTGATAAGGTAGGATGGGGCATGATTTCTATGG TTGATGCAGAGAGGAGGTTGCTGGCAAAGGCCCTAGAAGATACGGACAACCAACTATTTG TTTTGCTTTCTGACAGTTGTGTTCCCCTACACAATTTTGACTATGTGTACGACTTCTTGA TGGGATCAAGACACAGTTTTCTTGACTGCTTTGATGATCCTGGGCCACATGGAGTATTTA GATACTCGAAGCATATGTTGCCAGAAGTTCGAGAGATTGATTTTAGAAAGGGCTCGCAGT GGTTCGCAATCAAGAGGCAACATGCAATGGTGGTGGTTGCGGATAGTCTGTATTACACAA AATTCAGGCGTTTCTGCAAGCCAGGAATGGAAGAGGGTCGCAATTGTTATGCAGATGAGC ATTACTTGCCAACACTATTCCTTATGATGGACCCTGCTGGAATTGCTAATTGGTCTGTGA CTTATGTTGATTGGTCTGAGGGAAAGTGGCATCCCAGGTCTTTCCGAGCTAAGGATGTAA CTTATGAACTCCTCAAGAATATGACATCGGTTGACATCAGCTACCACATAACAAGTGATG AAAAGAAAGAGCTCTTGCAGAGGCCTTGCTTGTGGAATGGACTAAAGAGACCATGCTACT TGTTTGCAAGGAAGTTCTACCCAGAAACTTTGAACAATCTCATGTACTTATTCTCTAACT ACACCATTTTCTAAGCTCTAACGGGAAAATCCTCACATATTGGAAGCACTTGGTGCTTCA AAATTCTTTTGTACATCGCGGGAGAAGCAAATTTATTTACACTAATTGGGTATAGAAATA GGGGAAGTATTGGATTCTACTGCAGCAATATTAGGGTATTGTGGCCATGGGTATAGTTTA GGATTATATTATTTAAATTTCTTAGTTTTTCAGGGTTCTTTGTCTTCCTACAAACGTTGT TCATTCTGGCAAATTTTGCCACTATCAGTTTTCTCTTATAGCCCAGTTATAGAATTTTGC CACTTATCCATGCACAAAAAATGTGTGTAAATGGAATTCTATGTATTCTCTATTCATCCT GTATGCTTGTATTCTACAGAGGGATAACAAAAAAGTTTTGCAAAGCAGAATTC