Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0224700-02
CDS Infomation	cds chromosome:IRGSP-1.0:8:7594625:7596941:1 gene:Os08g0224700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:19S REGULATORY PARTICLE NON-ATPASE SUBUNIT 2A description:Similar to 26S proteasome subunit RPN2a. (Os08t0224700-01);Similar to predicted protein. (Os08t0224700-02)
Sequence	ATTCATAGAGGCCATCTCACACAAGGCAGAGCTTTAATGGCCCCATACCTTCCTCAGAGT GGTGCTGCAAGTGGTGGTAGTCCATATTCTGAAGGTGGTGCCCTTTATGCTCTGGGTCTG ATCCATGCAAACCATGGTGAAGGAATCAAACAATTTCTTCGTGAGAGCCTTCGCAACACT AGTTCTGAGGTCGTTCAGCATGGTGCTTGTCTGGGACTTGGACTTGCAGCTTTAGGCACA GCCGACGAGGAAATATTTGAGGATGTAAAGAATATTCTTTACACTGACAGTGCTGTGGCT GGTGAGGCTGCTGGCATTGGCATGGGCTTGCTTATGGCTGGAACAGCCAGTGAGAAGGCT GGAGAGATGCTTGCCTATGCACATGATACACAGCATGAGAAAATTATTCGGGGCTTGTCA CTTGGAATTGCATTGACAGTTTATGGCAGGGAAGAGGAAGCTGACACCTTGATTGAACAA ATGACTAGAGATCAAGATCCCATACTCCGTTATGGTGGTATGTACGCATTGGCTCTAGCG TACAGGGGAACTGCAAATAACAAAGCTATCCACCAGCTTCTTCATTTTGCGGTGTCAGAT GTGAGCGACGATGTCCGGAGGACTGCAGTATTGGCTCTTGGTTTTGTCCTGTACAATGAG CCTGAGCAGACTCCAAGAATTGTGTCTCTGCTCTCTGAATCATATAATCCGCATGTCCGT TATGGTGCCGCTTTAGCTGTTGGAATATCCTGTGCAGGAACAGGATTAAGTGATGCCATC TCCTTGTTGGAGCCTCTTACATCTGATGTTGTTGACTTCGTGCGGCAAGGTGCTCTCATT GCAATGGCAATGGTCATGATCCAAACTAATGAATCATATGACTCTCGTGTTGGAACATTC AGGCGTCAGTTGGAAAAGATCATTCTCGACAAGCATGAGGACACCATGAGCAAAATGGGT GCCATAATGGCTACTGGTATCCTTGATGCTGGTGGTAGGAACGTTACCATCAGGCTTCAG TCCAGGTCAAAGCATGACAAGCTGACTGCTGTTGTTGGCCTTGCCGTCTTCACCCAGTTC TGGTATTGGTACCCGCTGACATATTTCATCAGCCTGGCCTTCTCTCCGACGGCTTTTATT GGCCTCAACTCTGACTTGAAAGTGCCGAAGTTTGAGTTCCTGTCAAACACTAAACCATCG CTCTTTGATTACCCAAAGCCGACAACCCAACAAACCACGACTGCTTCAGTTAAGCTGCCT ACGGCCATCCTATCAACATATGCCAAGGCAAAATCTAGGGCAAAGAAGGAAGCCGAAAGC AAAGCTCAGGAGAAAGCAGAAGCACCACCAAGTGAAGATGCTTCTACTTCAATGCAGGTC GATGGTGTGGCGGAGAAGAAAGCCCCTGAGCCCGAACCGACCTTCCAGATCCTGACTAAC CCGGCCCGGGTTGTCCCGGCCCAGGAGAAGTTCATAAAATTCCTGGAGGGCGGCAGGTAC GAGCCTGTGAAGCTGGCGCCCTCCGGATTTGTCCTCCTACGGGACCTCAAGCCCACCGAG ACGGAGGAACTAGTCCTCACCGACGCCCCGGCAACTCAGGCGACGAACGCCGCAGCCGCC ACCGCTGGCCAGCAAGGCTCAGGCGCCGCCGCCATGGCCGTCGACGAGGAGCCCCTGCCA CCCCAGCCATTTGAGTACACCTCGTGA

Peptide Sequence

PEP ID	Os08t0224700-02
PEP Infomation	pep chromosome:IRGSP-1.0:8:7594625:7596941:1 gene:Os08g0224700 transcript:Os08t0224700-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:19S REGULATORY PARTICLE NON-ATPASE SUBUNIT 2A description:Similar to 26S proteasome subunit RPN2a. (Os08t0224700-01);Similar to predicted protein. (Os08t0224700-02)
Sequence	IHRGHLTQGRALMAPYLPQSGAASGGSPYSEGGALYALGLIHANHGEGIKQFLRESLRNT SSEVVQHGACLGLGLAALGTADEEIFEDVKNILYTDSAVAGEAAGIGMGLLMAGTASEKA GEMLAYAHDTQHEKIIRGLSLGIALTVYGREEEADTLIEQMTRDQDPILRYGGMYALALA YRGTANNKAIHQLLHFAVSDVSDDVRRTAVLALGFVLYNEPEQTPRIVSLLSESYNPHVR YGAALAVGISCAGTGLSDAISLLEPLTSDVVDFVRQGALIAMAMVMIQTNESYDSRVGTF RRQLEKIILDKHEDTMSKMGAIMATGILDAGGRNVTIRLQSRSKHDKLTAVVGLAVFTQF WYWYPLTYFISLAFSPTAFIGLNSDLKVPKFEFLSNTKPSLFDYPKPTTQQTTTASVKLP TAILSTYAKAKSRAKKEAESKAQEKAEAPPSEDASTSMQVDGVAEKKAPEPEPTFQILTN PARVVPAQEKFIKFLEGGRYEPVKLAPSGFVLLRDLKPTETEELVLTDAPATQATNAAAA TAGQQGSGAAAMAVDEEPLPPQPFEYTS

Transcript Sequence

Transcript ID	Os08t0224700-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:7594625:7596941:1 gene:Os08g0224700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:19S REGULATORY PARTICLE NON-ATPASE SUBUNIT 2A description:Similar to 26S proteasome subunit RPN2a. (Os08t0224700-01);Similar to predicted protein. (Os08t0224700-02)
Sequence	CATTCATAGAGGCCATCTCACACAAGGCAGAGCTTTAATGGCCCCATACCTTCCTCAGAG TGGTGCTGCAAGTGGTGGTAGTCCATATTCTGAAGGTGGTGCCCTTTATGCTCTGGGTCT GATCCATGCAAACCATGGTGAAGGAATCAAACAATTTCTTCGTGAGAGCCTTCGCAACAC TAGTTCTGAGGTCGTTCAGCATGGTGCTTGTCTGGGACTTGGACTTGCAGCTTTAGGCAC AGCCGACGAGGAAATATTTGAGGATGTAAAGAATATTCTTTACACTGACAGTGCTGTGGC TGGTGAGGCTGCTGGCATTGGCATGGGCTTGCTTATGGCTGGAACAGCCAGTGAGAAGGC TGGAGAGATGCTTGCCTATGCACATGATACACAGCATGAGAAAATTATTCGGGGCTTGTC ACTTGGAATTGCATTGACAGTTTATGGCAGGGAAGAGGAAGCTGACACCTTGATTGAACA AATGACTAGAGATCAAGATCCCATACTCCGTTATGGTGGTATGTACGCATTGGCTCTAGC GTACAGGGGAACTGCAAATAACAAAGCTATCCACCAGCTTCTTCATTTTGCGGTGTCAGA TGTGAGCGACGATGTCCGGAGGACTGCAGTATTGGCTCTTGGTTTTGTCCTGTACAATGA GCCTGAGCAGACTCCAAGAATTGTGTCTCTGCTCTCTGAATCATATAATCCGCATGTCCG TTATGGTGCCGCTTTAGCTGTTGGAATATCCTGTGCAGGAACAGGATTAAGTGATGCCAT CTCCTTGTTGGAGCCTCTTACATCTGATGTTGTTGACTTCGTGCGGCAAGGTGCTCTCAT TGCAATGGCAATGGTCATGATCCAAACTAATGAATCATATGACTCTCGTGTTGGAACATT CAGGCGTCAGTTGGAAAAGATCATTCTCGACAAGCATGAGGACACCATGAGCAAAATGGG TGCCATAATGGCTACTGGTATCCTTGATGCTGGTGGTAGGAACGTTACCATCAGGCTTCA GTCCAGGTCAAAGCATGACAAGCTGACTGCTGTTGTTGGCCTTGCCGTCTTCACCCAGTT CTGGTATTGGTACCCGCTGACATATTTCATCAGCCTGGCCTTCTCTCCGACGGCTTTTAT TGGCCTCAACTCTGACTTGAAAGTGCCGAAGTTTGAGTTCCTGTCAAACACTAAACCATC GCTCTTTGATTACCCAAAGCCGACAACCCAACAAACCACGACTGCTTCAGTTAAGCTGCC TACGGCCATCCTATCAACATATGCCAAGGCAAAATCTAGGGCAAAGAAGGAAGCCGAAAG CAAAGCTCAGGAGAAAGCAGAAGCACCACCAAGTGAAGATGCTTCTACTTCAATGCAGGT CGATGGTGTGGCGGAGAAGAAAGCCCCTGAGCCCGAACCGACCTTCCAGATCCTGACTAA CCCGGCCCGGGTTGTCCCGGCCCAGGAGAAGTTCATAAAATTCCTGGAGGGCGGCAGGTA CGAGCCTGTGAAGCTGGCGCCCTCCGGATTTGTCCTCCTACGGGACCTCAAGCCCACCGA GACGGAGGAACTAGTCCTCACCGACGCCCCGGCAACTCAGGCGACGAACGCCGCAGCCGC CACCGCTGGCCAGCAAGGCTCAGGCGCCGCCGCCATGGCCGTCGACGAGGAGCCCCTGCC ACCCCAGCCATTTGAGTACACCTCGTGATCCCTTGATGATCCCAGGGCTAAACACTTGTA CTGTTTGTTTCTAACTTGGTAGCCATGATGGAATCAAATGTTTCTTTCACAAAGCTTATG AATTGATTCTTTCCATTGATTTACTGGTTTAGTGTGTGGAAAAATTGTTGGTATTAGTCA CCAGAGTAAAATATTTCACCTGC