Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0223900-00
CDS Infomation

cds chromosome:IRGSP-1.0:8:7540127:7547972:1 gene:Os08g0223900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Cycloartenol synthase (EC 5.4.99.8) (Fragment). (Os08t0223900-00)
Sequence

ATGTGGAAGCTCAAGATTGCCGAGGGAGGACCATGGCTAAAGAGTGGAAACAGTCATGTT
GGAAGAGAAACATGGGAATTTGACCCAAATTTTGGAACAAGTGAAGAGCGGGAGGCGGTT
GAGGCTGCACGGATAGAGTTCCAGAAGAATAGGTTCAGAACAAGACACACCTCCGATGTT
TTGGCTCGCATGCAGTTAGCTAAGGCGAACAACTTCAGTATTGATCTACAGAAAGAAAAA
GATGGAAACCCCATAAATATTGACACAGCTACAGTATCAGATATACTGAAGAAGGCACTC
AGTTATTTCTCAGCCATACAGGCATATGATGGGCACTGGCCAGGGGATTTCCCAGGCCCA
CTGTTTACCACTGCAACCATGATCATAGTTCTATATGTCACAGAGTCATTAACTATTACA
CTGTCATCGGAACATCACAAGGAGATCTGTCGATATCTGTACAATCGTCAGAACATCGAT
GGAGGATGGGGACTACATGCAGAAGGTGAAAGTTCCATGCTTAGCACAGCTCTCAATTAT
ACTGCTCTGAGACTACTTGGGGAGAATGTTGATGATGGACCAGATATATCCATGCATAAA
GCAAGAAAATGGATACATGACCATGGAGGTGCAACAATGATACCGATCTTGGGAAAAGTG
TGGCTCTCGGTGCTTGGAGTTTTTGACTGGTCAGGTGTAAATCCTATTCCCCCAGAATTA
TTTCTTCTTCCATCTTTCGTTCCTATCCAACCAGGACGATTATGGAGTCACTTCCGAATG
GCTTTTATTCCCATGTCTTATTTGTATGGAAAAAAGTTTGTCGGTCCTATAACAAGATTG
GTTATATCATTAAGGGAAGAGCTACATATTCATCCCTATAAAAAGATTGACTGGAAGGAG
GCACGCAAATTATGTGCAAAGGAAGATGCCTATAATCCACATATGTGGCTACAAGAGTGC
CTATCTGACTGCCTTTATAGTTTTGGTGAGCCGTTTCTTACACGTTGGCCAATTTCCTAC
ATGAGAAAAAGAGCTCTATACCAAATTGCTGAGTTCTTGAAGTATGAAGATGAAAATTCT
CAGTATATCTGCATTGGTGCTGCACAGAAGGCATTATCCATGTTGTGCTGTTGGATTGAA
AATCCCAATTCAGATGCATTCAAGCGTCATTTGGCTAGAGTAGCTGATTTTCTATGGGTT
GGCGAAGATGGCATGAAAGTTCGGGTCTGTGCGGGTCAATTATGGGATGTTGCTTTCGCA
GTCCAAGCGATATTAGCGTGTAGCATCGCAGAAGAATTTGGAAGTACCCTTAAGAAAGCA
CATGGTTTCATAAAAACTTCCCAGATTATGGACAATCCTTCTGGTGACTTCAGCAGAAAG
TACCGTCACATATCTAAAGGAGGATGGGCCTTCCAGGTTGCAGATCAGGGGTGGCAGGTT
TCAGATTGCACAGCAGAAGCTCTTAAGGCTTTGCTACTGCTGTCAAAGTGTTTGTCAGAT
GGTGCAGATTATCAAATGGAAACCTACTGCTACTTTGACGCGGTGAATGTATTACTCTCG
TTACAGAACCCAAATGGTGGGTATGGAGCATGGGAGCTAGCTCGCACATATCCATGGATG
GAGATTTTCAACATGACAGAGATATATGCAGACATCATTGTGGAGCATCAGTACGTAGAG
TGTACCTCATCAGTCATCCAAGCATTGGCATTGTTCCGGGAGAAGTACCCTGGGCATCGG
AAAGATGAAATAGATCAATGCATCAGGAAAGCAACAGAATTCATCGAGAAGTTACAGAAT
GATGATGGATCATGGTTTGGATCATGGGGTATTTGCTTCACGTATGGAACATGGTTTGCA
ATAGAGGGTCTGTCAGCCGTGGGGCAGTGTTATGATGACAGCACCTGCATTCGGAAAGCC
TGTAAGTTTCTGTTATCAAAGCAACTAACAAATGGTGGATGGGGGGAGAGTCATCTTTCA
TCCAGAACCAAGGCATACACAAACCTAGATGGGGAGAAATCACATATAGTCAATACTGCA
TGGGCAATGTTGGCACTCATGAAAGCTGGACAGGTAGAGAGAGACCCCGCTCCTCTGCAC
AAAGCAGCAAGACTTATCATGAGCATGCAGCTCAGTGATGGTGACTTTCCACAAGAGGAA
ATGATCGGAAGTTTCTTGAAAAATGGCCCCTTGTGTTATATGGCTTATCGCAATATATTC
CCAATATGGGCTCTTGGAGAGTATCAGAAATTAGTATTTCAGAACTATCAGACCTCTAGC
ATCAAGCAAACAAATATAGCTCCATCTGCTGGCAATGCTGCTCTGAAGAATTCAGCAAGT
ACAACAGCGCCAACTTGA

Peptide Sequence

PEP ID

Os08t0223900-00
PEP Infomation

pep chromosome:IRGSP-1.0:8:7540127:7547972:1 gene:Os08g0223900 transcript:Os08t0223900-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Cycloartenol synthase (EC 5.4.99.8) (Fragment). (Os08t0223900-00)
Sequence

MWKLKIAEGGPWLKSGNSHVGRETWEFDPNFGTSEEREAVEAARIEFQKNRFRTRHTSDV
LARMQLAKANNFSIDLQKEKDGNPINIDTATVSDILKKALSYFSAIQAYDGHWPGDFPGP
LFTTATMIIVLYVTESLTITLSSEHHKEICRYLYNRQNIDGGWGLHAEGESSMLSTALNY
TALRLLGENVDDGPDISMHKARKWIHDHGGATMIPILGKVWLSVLGVFDWSGVNPIPPEL
FLLPSFVPIQPGRLWSHFRMAFIPMSYLYGKKFVGPITRLVISLREELHIHPYKKIDWKE
ARKLCAKEDAYNPHMWLQECLSDCLYSFGEPFLTRWPISYMRKRALYQIAEFLKYEDENS
QYICIGAAQKALSMLCCWIENPNSDAFKRHLARVADFLWVGEDGMKVRVCAGQLWDVAFA
VQAILACSIAEEFGSTLKKAHGFIKTSQIMDNPSGDFSRKYRHISKGGWAFQVADQGWQV
SDCTAEALKALLLLSKCLSDGADYQMETYCYFDAVNVLLSLQNPNGGYGAWELARTYPWM
EIFNMTEIYADIIVEHQYVECTSSVIQALALFREKYPGHRKDEIDQCIRKATEFIEKLQN
DDGSWFGSWGICFTYGTWFAIEGLSAVGQCYDDSTCIRKACKFLLSKQLTNGGWGESHLS
SRTKAYTNLDGEKSHIVNTAWAMLALMKAGQVERDPAPLHKAARLIMSMQLSDGDFPQEE
MIGSFLKNGPLCYMAYRNIFPIWALGEYQKLVFQNYQTSSIKQTNIAPSAGNAALKNSAS
TTAPT

Transcript Sequence

Transcript ID

Os08t0223900-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:7540127:7547972:1 gene:Os08g0223900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Cycloartenol synthase (EC 5.4.99.8) (Fragment). (Os08t0223900-00)
Sequence

ACAATATGTGGAAGCTCAAGATTGCCGAGGGAGGACCATGGCTAAAGAGTGGAAACAGTC
ATGTTGGAAGAGAAACATGGGAATTTGACCCAAATTTTGGAACAAGTGAAGAGCGGGAGG
CGGTTGAGGCTGCACGGATAGAGTTCCAGAAGAATAGGTTCAGAACAAGACACACCTCCG
ATGTTTTGGCTCGCATGCAGTTAGCTAAGGCGAACAACTTCAGTATTGATCTACAGAAAG
AAAAAGATGGAAACCCCATAAATATTGACACAGCTACAGTATCAGATATACTGAAGAAGG
CACTCAGTTATTTCTCAGCCATACAGGCATATGATGGGCACTGGCCAGGGGATTTCCCAG
GCCCACTGTTTACCACTGCAACCATGATCATAGTTCTATATGTCACAGAGTCATTAACTA
TTACACTGTCATCGGAACATCACAAGGAGATCTGTCGATATCTGTACAATCGTCAGAACA
TCGATGGAGGATGGGGACTACATGCAGAAGGTGAAAGTTCCATGCTTAGCACAGCTCTCA
ATTATACTGCTCTGAGACTACTTGGGGAGAATGTTGATGATGGACCAGATATATCCATGC
ATAAAGCAAGAAAATGGATACATGACCATGGAGGTGCAACAATGATACCGATCTTGGGAA
AAGTGTGGCTCTCGGTGCTTGGAGTTTTTGACTGGTCAGGTGTAAATCCTATTCCCCCAG
AATTATTTCTTCTTCCATCTTTCGTTCCTATCCAACCAGGACGATTATGGAGTCACTTCC
GAATGGCTTTTATTCCCATGTCTTATTTGTATGGAAAAAAGTTTGTCGGTCCTATAACAA
GATTGGTTATATCATTAAGGGAAGAGCTACATATTCATCCCTATAAAAAGATTGACTGGA
AGGAGGCACGCAAATTATGTGCAAAGGAAGATGCCTATAATCCACATATGTGGCTACAAG
AGTGCCTATCTGACTGCCTTTATAGTTTTGGTGAGCCGTTTCTTACACGTTGGCCAATTT
CCTACATGAGAAAAAGAGCTCTATACCAAATTGCTGAGTTCTTGAAGTATGAAGATGAAA
ATTCTCAGTATATCTGCATTGGTGCTGCACAGAAGGCATTATCCATGTTGTGCTGTTGGA
TTGAAAATCCCAATTCAGATGCATTCAAGCGTCATTTGGCTAGAGTAGCTGATTTTCTAT
GGGTTGGCGAAGATGGCATGAAAGTTCGGGTCTGTGCGGGTCAATTATGGGATGTTGCTT
TCGCAGTCCAAGCGATATTAGCGTGTAGCATCGCAGAAGAATTTGGAAGTACCCTTAAGA
AAGCACATGGTTTCATAAAAACTTCCCAGATTATGGACAATCCTTCTGGTGACTTCAGCA
GAAAGTACCGTCACATATCTAAAGGAGGATGGGCCTTCCAGGTTGCAGATCAGGGGTGGC
AGGTTTCAGATTGCACAGCAGAAGCTCTTAAGGCTTTGCTACTGCTGTCAAAGTGTTTGT
CAGATGGTGCAGATTATCAAATGGAAACCTACTGCTACTTTGACGCGGTGAATGTATTAC
TCTCGTTACAGAACCCAAATGGTGGGTATGGAGCATGGGAGCTAGCTCGCACATATCCAT
GGATGGAGATTTTCAACATGACAGAGATATATGCAGACATCATTGTGGAGCATCAGTACG
TAGAGTGTACCTCATCAGTCATCCAAGCATTGGCATTGTTCCGGGAGAAGTACCCTGGGC
ATCGGAAAGATGAAATAGATCAATGCATCAGGAAAGCAACAGAATTCATCGAGAAGTTAC
AGAATGATGATGGATCATGGTTTGGATCATGGGGTATTTGCTTCACGTATGGAACATGGT
TTGCAATAGAGGGTCTGTCAGCCGTGGGGCAGTGTTATGATGACAGCACCTGCATTCGGA
AAGCCTGTAAGTTTCTGTTATCAAAGCAACTAACAAATGGTGGATGGGGGGAGAGTCATC
TTTCATCCAGAACCAAGGCATACACAAACCTAGATGGGGAGAAATCACATATAGTCAATA
CTGCATGGGCAATGTTGGCACTCATGAAAGCTGGACAGGTAGAGAGAGACCCCGCTCCTC
TGCACAAAGCAGCAAGACTTATCATGAGCATGCAGCTCAGTGATGGTGACTTTCCACAAG
AGGAAATGATCGGAAGTTTCTTGAAAAATGGCCCCTTGTGTTATATGGCTTATCGCAATA
TATTCCCAATATGGGCTCTTGGAGAGTATCAGAAATTAGTATTTCAGAACTATCAGACCT
CTAGCATCAAGCAAACAAATATAGCTCCATCTGCTGGCAATGCTGCTCTGAAGAATTCAG
CAAGTACAACAGCGCCAACTTGATTTCTTGGCAGAAT