Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0222100-01
CDS Infomation

cds chromosome:IRGSP-1.0:8:7410180:7411388:1 gene:Os08g0222100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os08t0222100-01)
Sequence

ATGAGCAGGTCGAGCATGGCCGCTGTCTTCCTGGTGGTGTTGATAGCCATCAACGTCGTC
TGCTTATCCCCACAAGGTGCAACTGCAGCGCCAGAGGGGGAACTTCATAAACTCAACCTT
GAGCTGCCACCGCCGTTGCCGCCTGGGAAGGAACCCTCAACGGAGGCGTACCGGTTCACC
CAACAAGTCTGCGATTTTGGAACTAGCACCTTCACGGAACAGATGATCGGTGCCCGCTGC
TACGATGTACTCATCCCGTATGGCGAGTCATTCAAGGGCAACCAAGTGAAGGCCACTCAG
GTGGCCACCATCATCTTAGTCACCAAGATCCAAGCCCTCACTAGTGAGGCGTACGCGATA
AGAGACATGGGCATCAGGGACGAAAACATCAATAACTGCGGGTCTTTCTTTGCCATTGGC
GAAACCTTTTCGGACACCACCAACTCGACGCTATACGCGCTCGAGCGCCTCACTGCCGCC
GGAGAAGGTAAACGCAGTAAGGAGGACCTGGAAACTGTGCACAAGTGGACCAAGAATTTG
GAGACCCAATACGATGAGACCGCGAGCAAGTGCAAGTTAGGTGATCTGTTCAAGTACGGT
GACAAGAAGGTTCCCACCGTTTGGGTCATAGACCTGCTCACGACCACAGCCATCCGCCTC
CTCAATGCCATAAAGCCATGA

Peptide Sequence

PEP ID

Os08t0222100-01
PEP Infomation

pep chromosome:IRGSP-1.0:8:7410180:7411388:1 gene:Os08g0222100 transcript:Os08t0222100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os08t0222100-01)
Sequence

MSRSSMAAVFLVVLIAINVVCLSPQGATAAPEGELHKLNLELPPPLPPGKEPSTEAYRFT
QQVCDFGTSTFTEQMIGARCYDVLIPYGESFKGNQVKATQVATIILVTKIQALTSEAYAI
RDMGIRDENINNCGSFFAIGETFSDTTNSTLYALERLTAAGEGKRSKEDLETVHKWTKNL
ETQYDETASKCKLGDLFKYGDKKVPTVWVIDLLTTTAIRLLNAIKP

Transcript Sequence

Transcript ID

Os08t0222100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:7410180:7411388:1 gene:Os08g0222100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os08t0222100-01)
Sequence

ATAGATGCACTAATCCATCCTGTAGCTTCTAATCAAACTGAGAGGGAGAGAGATCAGAGA
GAGCGCATATAAATACAATGAGCAGGTCGAGCATGGCCGCTGTCTTCCTGGTGGTGTTGA
TAGCCATCAACGTCGTCTGCTTATCCCCACAAGGTGCAACTGCAGCGCCAGAGGGGGAAC
TTCATAAACTCAACCTTGAGCTGCCACCGCCGTTGCCGCCTGGGAAGGAACCCTCAACGG
AGGCGTACCGGTTCACCCAACAAGTCTGCGATTTTGGAACTAGCACCTTCACGGAACAGA
TGATCGGTGCCCGCTGCTACGATGTACTCATCCCGTATGGCGAGTCATTCAAGGGCAACC
AAGTGAAGGCCACTCAGGTGGCCACCATCATCTTAGTCACCAAGATCCAAGCCCTCACTA
GTGAGGCGTACGCGATAAGAGACATGGGCATCAGGGACGAAAACATCAATAACTGCGGGT
CTTTCTTTGCCATTGGCGAAACCTTTTCGGACACCACCAACTCGACGCTATACGCGCTCG
AGCGCCTCACTGCCGCCGGAGAAGGTAAACGCAGTAAGGAGGACCTGGAAACTGTGCACA
AGTGGACCAAGAATTTGGAGACCCAATACGATGAGACCGCGAGCAAGTGCAAGTTAGGTG
ATCTGTTCAAGTACGGTGACAAGAAGGTTCCCACCGTTTGGGTCATAGACCTGCTCACGA
CCACAGCCATCCGCCTCCTCAATGCCATAAAGCCATGATTGATCGATCGATCATCCCTTC
AATCTTAGCTATATATACCTTCCACTAAATTTTTTTTATTTATATTTTGGATAATTCCCA
TGATATATATGTAATAAGTGCGTGATGCGCATGGATATCGCATGCATGCTGCATTTGTAA
CATTGTTATCAATATTTGAAAATATTTTTTTCAATATTGTAATTACTAGCAAAGTGTGTC
GATGTGTTGTAACGGACCGAAAAACCAAAATGCAATAATGGTTAAGCTGACAAACAATAC
T