Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0220600-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:7339066:7348077:-1 gene:Os08g0220600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:VIN3-LIKE 4, VERNALIZATION INSENSITIVE 3-LIKE 1 description:Fibronectin, type III domain containing protein. (Os08t0220600-01);Hypothetical conserved gene. (Os08t0220600-02);Hypothetical conserved gene. (Os08t0220600-03)
Sequence	ATGGACCCGGGAAAACACAATGGAATGAGTCTGAAGGACAGAAGAGAATTAGTATATGAA GTTTCACAATGGCCACAAGGTGCCTCTGAGATTTTACAATGTTGGACTCGCAGAGATCTT CTTGAGCTTATCTGTGCTGAGTTGGGCAAGGAGAGGAAATACACTAATGTTCCAAAATCT AAAATGATTGCTTATCTGTTAAAATTAGTTTTACGAAAGAATGGACAGCCAAAGGATGAT AATGCAAATGCTTCAATTTTGGGGCAGAATAACAAAGATGACACAGAGAAGAAAGAAAAT GAGGAACAGCCACATCATTTCAGCAGAAGTGCAAAGTCTGACTCATCAATGTGCAGAGAG GCCCAAGCTGGTAGCACAGCGGTATGCCGAAATGTTGCATGCCAGGCTACTTTGAACTCT GGAGATGCGTATTGCAAGCGTTGCTCTTGCTGCATTTGCCATAAATATGATGAGAACAAA GATCCTAGCTTATGGTTGGTTTGCAGCTCTGATACACCGTACTCTGGCTATTCATGCGGC ACATCATGCCACCTAAAGTGTGCTCTAAAGAATAAAAAAGCTGGCATTTTCAAGAATGGG TGCAACAAGAAGTCAGATGGTAGTTTTTACTGTGTTTGGTGTGGGAAGATGAACTGGCTA ATGAGGAATCTGCGTAAGCAGCTGGCAATTGCAAGAGAATCTAGAAGAGTTGATGTACTG TGTGAGCGTTTGTCACTGACTCATAAAATGGTGAAAGGGTCTGAACGTTACAGGGAACTG GCAAACATAATCAACTCAGCTGTGAAAATACTTGAGAAAGAAGTTGGTTGTGCATTAGAT CAAGTGTCTGCAATCACGGGGCGGGGCATCGTGAACCGGCTTTGTTGTGGTGCTGATGTT CAAAAACTTTGTTCATGTGCACTAGAAATGGTAGACTCCACATTGAGTAGCACCCTGGAC TTCGAAACAAACAATAATCTGGAAGCGCCAGGTCCCCAGCCTCAAGTATTTTTTGTGGAG ATTACTCCATTTTCTGTGCTTGTTGTATTGAAGTACCAGGATAATATCGCTGAGGAGATT GATGGTTGCAAAGTTTGGCACCGAAGTGCAAACATGGCCAACTATCCAGCAGAGCCCACT TGCCACGTTCTTAGACCAAATACAAGGAGTCTTTTTTCAGGTCTAAGCCCTTCTACTGAG TATTTCTTCAAGGTTTTGCCTTTTGGCTGTTCACAGGGATATGGCGAATGGGAGGTAAAA TGCTCTACACGAAGCCTTAACCATGGCAGCAGCCAGTGCTCAACACAGAATTCCGAGAGT ATGTCCATCAAGGAGGATTTGGAGCAGCATCAGAAAAATGAGTTGAATCTGAAGAACAAG CAGTGGTGGGGCATTCAATATGACTCACCCTCGGCAAACTCGAATGAGAACGATGTGTGT CCTGACCTGCACCCTAAGCGAGCTAAGCTCGCAAAGTTGGACGGTGCAAGTGACAACGAC GAAAGCCAGTTGCTGCCAACATCAGAAGTTTTACCATTCATGAGCTCTAATTCTTCACTT TCAGAAGTTCCAAGCAAACCTGACTGGGTTAGCAGCACCCCAGATTCCGCCTGCAAGAAC CATGTTGAGAGGCAGTATGAATACAGTGTGAAGGTCATTAGATGGCTGGAGCATGAAGGG CACATGGACAAGGATTTCCGCGTGAAGTTCCTCACATGGTTTAGCCTGAAGGCGTCGGCA CAGGAGCGACGCATTGTGAACGCCTTCGTAGATGCTCTGGTGAGTGATCCTGCGAGCCTG GTAGCACAACTGATTGATTCGTTTATGGAGGTTGTCTGCAGCAAGGAGAAGCCTGCTCAG CCGAATGGTGGGTGCTGCAACCTTTGGCATTAG

Peptide Sequence

PEP ID	Os08t0220600-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:7339066:7348077:-1 gene:Os08g0220600 transcript:Os08t0220600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:VIN3-LIKE 4, VERNALIZATION INSENSITIVE 3-LIKE 1 description:Fibronectin, type III domain containing protein. (Os08t0220600-01);Hypothetical conserved gene. (Os08t0220600-02);Hypothetical conserved gene. (Os08t0220600-03)
Sequence	MDPGKHNGMSLKDRRELVYEVSQWPQGASEILQCWTRRDLLELICAELGKERKYTNVPKS KMIAYLLKLVLRKNGQPKDDNANASILGQNNKDDTEKKENEEQPHHFSRSAKSDSSMCRE AQAGSTAVCRNVACQATLNSGDAYCKRCSCCICHKYDENKDPSLWLVCSSDTPYSGYSCG TSCHLKCALKNKKAGIFKNGCNKKSDGSFYCVWCGKMNWLMRNLRKQLAIARESRRVDVL CERLSLTHKMVKGSERYRELANIINSAVKILEKEVGCALDQVSAITGRGIVNRLCCGADV QKLCSCALEMVDSTLSSTLDFETNNNLEAPGPQPQVFFVEITPFSVLVVLKYQDNIAEEI DGCKVWHRSANMANYPAEPTCHVLRPNTRSLFSGLSPSTEYFFKVLPFGCSQGYGEWEVK CSTRSLNHGSSQCSTQNSESMSIKEDLEQHQKNELNLKNKQWWGIQYDSPSANSNENDVC PDLHPKRAKLAKLDGASDNDESQLLPTSEVLPFMSSNSSLSEVPSKPDWVSSTPDSACKN HVERQYEYSVKVIRWLEHEGHMDKDFRVKFLTWFSLKASAQERRIVNAFVDALVSDPASL VAQLIDSFMEVVCSKEKPAQPNGGCCNLWH

Transcript Sequence

Transcript ID	Os08t0220600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:7339066:7348077:-1 gene:Os08g0220600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:VIN3-LIKE 4, VERNALIZATION INSENSITIVE 3-LIKE 1 description:Fibronectin, type III domain containing protein. (Os08t0220600-01);Hypothetical conserved gene. (Os08t0220600-02);Hypothetical conserved gene. (Os08t0220600-03)
Sequence	ACGATCTTGGTTCGCTTCGTGCGACTCCTCCTCCTCTTGCGCCGGTGCCGACCTCGCCTC GCCTCGCCTGCGTCGCGTCGATCTCGCCAGCGGCGGCGCCAGCCGGCCGGCGTCTGCTGC GTCCTCCGCATCCTCGCTCGCCGAGAGTTGGGGTCAAGCAAAGTTGGTTGTTTTTTACTC GAATGTCGTGAGGAACACCGAGGAATCCTCCAGTTTCGCATGAGACCCATATGTTGAACA AAGGTGAAGCTGTGCTGTGGAGACCTGATAAAATTTTCTAATAATGCTTGTGCAAATGAA GAATACTGTTCATCTCACGCTATTCCTGTGTTCTTTCTCAAGAATGCTTTGCTCCTATTC TTTTATTGAAATCAATTTGTGTTATTATCTTCCCATTCGTAAGGTGCTGACTAGTTCACT TTTTTATGTCATAGAGTAGGAAGGTTCTCTGTACTGCAAGTGTTTGGATTTCCTCGAGCC GAATGAGCTTTCACTGGTGGATGTGGTAATAAAAGTCCCTGTTTTCAGGATTTTTCATGG ACCCGGGAAAACACAATGGAATGAGTCTGAAGGACAGAAGAGAATTAGTATATGAAGTTT CACAATGGCCACAAGGTGCCTCTGAGATTTTACAATGTTGGACTCGCAGAGATCTTCTTG AGCTTATCTGTGCTGAGTTGGGCAAGGAGAGGAAATACACTAATGTTCCAAAATCTAAAA TGATTGCTTATCTGTTAAAATTAGTTTTACGAAAGAATGGACAGCCAAAGGATGATAATG CAAATGCTTCAATTTTGGGGCAGAATAACAAAGATGACACAGAGAAGAAAGAAAATGAGG AACAGCCACATCATTTCAGCAGAAGTGCAAAGTCTGACTCATCAATGTGCAGAGAGGCCC AAGCTGGTAGCACAGCGGTATGCCGAAATGTTGCATGCCAGGCTACTTTGAACTCTGGAG ATGCGTATTGCAAGCGTTGCTCTTGCTGCATTTGCCATAAATATGATGAGAACAAAGATC CTAGCTTATGGTTGGTTTGCAGCTCTGATACACCGTACTCTGGCTATTCATGCGGCACAT CATGCCACCTAAAGTGTGCTCTAAAGAATAAAAAAGCTGGCATTTTCAAGAATGGGTGCA ACAAGAAGTCAGATGGTAGTTTTTACTGTGTTTGGTGTGGGAAGATGAACTGGCTAATGA GGAATCTGCGTAAGCAGCTGGCAATTGCAAGAGAATCTAGAAGAGTTGATGTACTGTGTG AGCGTTTGTCACTGACTCATAAAATGGTGAAAGGGTCTGAACGTTACAGGGAACTGGCAA ACATAATCAACTCAGCTGTGAAAATACTTGAGAAAGAAGTTGGTTGTGCATTAGATCAAG TGTCTGCAATCACGGGGCGGGGCATCGTGAACCGGCTTTGTTGTGGTGCTGATGTTCAAA AACTTTGTTCATGTGCACTAGAAATGGTAGACTCCACATTGAGTAGCACCCTGGACTTCG AAACAAACAATAATCTGGAAGCGCCAGGTCCCCAGCCTCAAGTATTTTTTGTGGAGATTA CTCCATTTTCTGTGCTTGTTGTATTGAAGTACCAGGATAATATCGCTGAGGAGATTGATG GTTGCAAAGTTTGGCACCGAAGTGCAAACATGGCCAACTATCCAGCAGAGCCCACTTGCC ACGTTCTTAGACCAAATACAAGGAGTCTTTTTTCAGGTCTAAGCCCTTCTACTGAGTATT TCTTCAAGGTTTTGCCTTTTGGCTGTTCACAGGGATATGGCGAATGGGAGGTAAAATGCT CTACACGAAGCCTTAACCATGGCAGCAGCCAGTGCTCAACACAGAATTCCGAGAGTATGT CCATCAAGGAGGATTTGGAGCAGCATCAGAAAAATGAGTTGAATCTGAAGAACAAGCAGT GGTGGGGCATTCAATATGACTCACCCTCGGCAAACTCGAATGAGAACGATGTGTGTCCTG ACCTGCACCCTAAGCGAGCTAAGCTCGCAAAGTTGGACGGTGCAAGTGACAACGACGAAA GCCAGTTGCTGCCAACATCAGAAGTTTTACCATTCATGAGCTCTAATTCTTCACTTTCAG AAGTTCCAAGCAAACCTGACTGGGTTAGCAGCACCCCAGATTCCGCCTGCAAGAACCATG TTGAGAGGCAGTATGAATACAGTGTGAAGGTCATTAGATGGCTGGAGCATGAAGGGCACA TGGACAAGGATTTCCGCGTGAAGTTCCTCACATGGTTTAGCCTGAAGGCGTCGGCACAGG AGCGACGCATTGTGAACGCCTTCGTAGATGCTCTGGTGAGTGATCCTGCGAGCCTGGTAG CACAACTGATTGATTCGTTTATGGAGGTTGTCTGCAGCAAGGAGAAGCCTGCTCAGCCGA ATGGTGGGTGCTGCAACCTTTGGCATTAGAAAGTTCCATTGCCACTGAGGAATCTCACTA TCATATTTTTGCCAATAATCATCTGCATCGAAAAGCTGAGCAATTCAAGCTATGGCTTAT TGCTTTATTTGATCAATTTAACACTAGTTGCTGATTGCTAGGTTTCTGAACTGTGGTGGT GGTGGTGGTGGTTATGTTAGGTGTATGAACTAAGCTGAAGTTGTTGACAAGTGATTCCTG GAATGCTATAAATGGAGGTAGGTTTAGATGCTTC