Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0205900-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:6170105:6175794:-1 gene:Os08g0205900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Viroid RNA-binding protein (Fragment). (Os08t0205900-01)
Sequence	ATGATTTGCCGCAGTCTCCTCCTTCTCAGATCTAATGCGGCCTCCAAGGCAAGCAACATA GTAAAACATGTAGCTGCCACTGGATGTTTGCCAAAATATTCCTCAGAGGCACCAGCCAGA TATTTCAGCTCTGAACCGTCTCTTCAGGTCGACTCGACAGAAGAAAATGGGTTCAAGGGG CATGGCATGCTGGCCCCATTCACTGCTGGATGGCAGAGCACCGATTTGCATCCTCTGGTT ATTGACAGATCTGAGGGTTCTTACGTTTATGATATCAATGGGAAGAAGTACATAGATGCT CTTGCAGGATTGTGGTCTACGGCATTGGGTGGTAATGAGCCTCGATTGATCAAAGCTGCA ACTGATCAATTGAACAAATTACCCTTCTACCACTCCTTTTGGAACCGTACTACCAAACCC TCATTGGATCTTGCTAATGAAATTCTCAGCATGTTCACTGCAAGGGAAATGGGAAAAATA TTCTTTACAAATAGTGGTTCAGAAGCAAATGATTCTCAGGTAAAGCTAGTTTGGTATTAT AACAATGCATTGGGAAGACCTAACAAGAAGAAATTTATCGCACGCTCAAAATCATATCAT GGATCAACATTAGTGTCAGCCAGTCTATCAGGTCTTCCTGCTCTTCACCAAAAGTTTGAT CTGCCAGCTCCTTTTGTTCTGCACACAGATTGCCCTCACTACTGGCGCTTCCATCTTCCT GATGAGACAGAAGAAGAATTTGCAACTAGACTTGCCACCAACCTGGAGAATCTTATTCTC AAAGAAGGACCAGAAACAATTGCTGCTTTCATTGCTGAACCTGTGATGGGTGCTGGCGGT GTTATCCCTCCTCCAAAGACATACTTTGAGAAGATTCAAGCAGTCCTCAAGAAGTATGAC ATCTTATTAATAGCAGATGAGGTCATTACAGCATTTGGTAGATTGGGAACCATGTTTGGA TGTGATATGTATGACATTAAACCAGATCTTGTCTCAATAGCCAAGGCTCTATCTTCTGCC TACATGCCAATTGGAGCTATTCTTGTTAGTCCGGAAATAACAGATGTAATTTATTCACAG AGCAACAAGCTCGGTTCTTTTGCTCATGGATTTACATACTCGGGGCATCCAGTTTCCTGT GCTGTCGCCATAGAAGCATTGAAGATTTATAAAGAAAGGAATATCATCGAACATGTTCAG AAAATTGCCCCAAGGTTCCAGGAGGGAATCAAGGCCTTCTCTGGAAGTCCAATTGTAGGC GAGATACGTGGTTTAGGACTGATACTTGGGACTGAATTTGTCGACAACAAGTCTCCGAAT GATCCATTCCCTGCTGAATGGGGTGTTGGTTCATTGTTTGGTGCCGAGTGTGAGAAGCGC GGAATGCTTATCAGGGTTGCTGGGGATAACATTATGCTTTCGCCACCGCTTATAATGACT CCTGATGAAGTTGAAGAAATTATTTGCAAATATGGTGATGCCCTGAAGGCCACAGAGGAA AGGATTGCAGAGCTCAAAGCCAAGAGGGGTTAG

Peptide Sequence

PEP ID	Os08t0205900-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:6170105:6175794:-1 gene:Os08g0205900 transcript:Os08t0205900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Viroid RNA-binding protein (Fragment). (Os08t0205900-01)
Sequence	MICRSLLLLRSNAASKASNIVKHVAATGCLPKYSSEAPARYFSSEPSLQVDSTEENGFKG HGMLAPFTAGWQSTDLHPLVIDRSEGSYVYDINGKKYIDALAGLWSTALGGNEPRLIKAA TDQLNKLPFYHSFWNRTTKPSLDLANEILSMFTAREMGKIFFTNSGSEANDSQVKLVWYY NNALGRPNKKKFIARSKSYHGSTLVSASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLP DETEEEFATRLATNLENLILKEGPETIAAFIAEPVMGAGGVIPPPKTYFEKIQAVLKKYD ILLIADEVITAFGRLGTMFGCDMYDIKPDLVSIAKALSSAYMPIGAILVSPEITDVIYSQ SNKLGSFAHGFTYSGHPVSCAVAIEALKIYKERNIIEHVQKIAPRFQEGIKAFSGSPIVG EIRGLGLILGTEFVDNKSPNDPFPAEWGVGSLFGAECEKRGMLIRVAGDNIMLSPPLIMT PDEVEEIICKYGDALKATEERIAELKAKRG

Transcript Sequence

Transcript ID	Os08t0205900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:6170105:6175794:-1 gene:Os08g0205900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Viroid RNA-binding protein (Fragment). (Os08t0205900-01)
Sequence	ACATCCTTTTCATCTCCCACCTCCTCACTCCTCGTCAGTTCGTCACTTGCTTCCAAGAAC CCCGTGACAAGGCGGGAAGGAATCCGAATCGCAGCGAGATGATTTGCCGCAGTCTCCTCC TTCTCAGATCTAATGCGGCCTCCAAGGCAAGCAACATAGTAAAACATGTAGCTGCCACTG GATGTTTGCCAAAATATTCCTCAGAGGCACCAGCCAGATATTTCAGCTCTGAACCGTCTC TTCAGGTCGACTCGACAGAAGAAAATGGGTTCAAGGGGCATGGCATGCTGGCCCCATTCA CTGCTGGATGGCAGAGCACCGATTTGCATCCTCTGGTTATTGACAGATCTGAGGGTTCTT ACGTTTATGATATCAATGGGAAGAAGTACATAGATGCTCTTGCAGGATTGTGGTCTACGG CATTGGGTGGTAATGAGCCTCGATTGATCAAAGCTGCAACTGATCAATTGAACAAATTAC CCTTCTACCACTCCTTTTGGAACCGTACTACCAAACCCTCATTGGATCTTGCTAATGAAA TTCTCAGCATGTTCACTGCAAGGGAAATGGGAAAAATATTCTTTACAAATAGTGGTTCAG AAGCAAATGATTCTCAGGTAAAGCTAGTTTGGTATTATAACAATGCATTGGGAAGACCTA ACAAGAAGAAATTTATCGCACGCTCAAAATCATATCATGGATCAACATTAGTGTCAGCCA GTCTATCAGGTCTTCCTGCTCTTCACCAAAAGTTTGATCTGCCAGCTCCTTTTGTTCTGC ACACAGATTGCCCTCACTACTGGCGCTTCCATCTTCCTGATGAGACAGAAGAAGAATTTG CAACTAGACTTGCCACCAACCTGGAGAATCTTATTCTCAAAGAAGGACCAGAAACAATTG CTGCTTTCATTGCTGAACCTGTGATGGGTGCTGGCGGTGTTATCCCTCCTCCAAAGACAT ACTTTGAGAAGATTCAAGCAGTCCTCAAGAAGTATGACATCTTATTAATAGCAGATGAGG TCATTACAGCATTTGGTAGATTGGGAACCATGTTTGGATGTGATATGTATGACATTAAAC CAGATCTTGTCTCAATAGCCAAGGCTCTATCTTCTGCCTACATGCCAATTGGAGCTATTC TTGTTAGTCCGGAAATAACAGATGTAATTTATTCACAGAGCAACAAGCTCGGTTCTTTTG CTCATGGATTTACATACTCGGGGCATCCAGTTTCCTGTGCTGTCGCCATAGAAGCATTGA AGATTTATAAAGAAAGGAATATCATCGAACATGTTCAGAAAATTGCCCCAAGGTTCCAGG AGGGAATCAAGGCCTTCTCTGGAAGTCCAATTGTAGGCGAGATACGTGGTTTAGGACTGA TACTTGGGACTGAATTTGTCGACAACAAGTCTCCGAATGATCCATTCCCTGCTGAATGGG GTGTTGGTTCATTGTTTGGTGCCGAGTGTGAGAAGCGCGGAATGCTTATCAGGGTTGCTG GGGATAACATTATGCTTTCGCCACCGCTTATAATGACTCCTGATGAAGTTGAAGAAATTA TTTGCAAATATGGTGATGCCCTGAAGGCCACAGAGGAAAGGATTGCAGAGCTCAAAGCCA AGAGGGGTTAGCCATTGCCACTGCCGCTGTCGTTGTTGTAGTGATTGATGATGGTGATGA CAAATTGACAATGTTCAATGTATACAGAGTGGTTTCATCTGTAGATGCCAATAATGAACT GTAAGCCTGAAGCTTGTTCTAGATGCGAACATTGAAAATGATACAATTGTTATCTTCAAC TGAATATTGGAATGGGGAATATGGCAATTGCTTCTCTCAATC