Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0205500-00
CDS Infomation

cds chromosome:IRGSP-1.0:8:6161997:6163054:-1 gene:Os08g0205500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Heavy metal-associated domain, HMA domain containing protein. (Os08t0205500-00)
Sequence

ATGCAGAGAGTTGAGCTGAAGGTGAGTGTCAACTGCTGCGACGGATGCCGGAGCAAGGTG
CTCAAAGCCCTCAACCTTAAAGGCGTGCTGAGGACGGAGGTCCACCCGACGGCCGGCAGG
GTGGCGGTCGTCGGCGACGTGGACGCCGGTCGCCTCGTCAAGAGGCTCGCCAAGGTCGGC
AAGATCGCCGAGGTGATCGTCGTCGCGCAGCCGTCGCCGGAGGTGGAGAGGAGGAGGCGC
GACGTCGGCGGCAGCAAGAAGGAGGCGTCGCCGGACAACGGGAAGATGGGCGGCGGCACG
GCGCCGAAACACGGCGGCGCCGACGACGACAAGCGCGGCGAGACGAATGGCGGCGCAGGG
AGCGGGGCTAGCTCAGCTCGAATCCATGGCGGTGGCGACGACGACGTGAAGGCGGCCATG
TGCTGCTACCACCGGGCGGAGCCGCCGGCCATGGCCGTGCCCGTGCTGCAGCCACCGTAC
TATGCGGCGAACTTCACAATGCCGCCGCCGCAGCCGCCGGCGGCGGCGTACGGTTTTGGT
GGCTGCTACCACGGGACTCCTTCGCCGGCGATGGCGCTGTGCCGCCGCGGCCGTATTCCG
GTGGTCCGGCCGCAGCCGACCCGGTTCGCCGACGAGTGCTGCATGTACGGCGACGACGAC
ATCGCCGGCTGCCACGTCATGTGA

Peptide Sequence

PEP ID

Os08t0205500-00
PEP Infomation

pep chromosome:IRGSP-1.0:8:6161997:6163054:-1 gene:Os08g0205500 transcript:Os08t0205500-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Heavy metal-associated domain, HMA domain containing protein. (Os08t0205500-00)
Sequence

MQRVELKVSVNCCDGCRSKVLKALNLKGVLRTEVHPTAGRVAVVGDVDAGRLVKRLAKVG
KIAEVIVVAQPSPEVERRRRDVGGSKKEASPDNGKMGGGTAPKHGGADDDKRGETNGGAG
SGASSARIHGGGDDDVKAAMCCYHRAEPPAMAVPVLQPPYYAANFTMPPPQPPAAAYGFG
GCYHGTPSPAMALCRRGRIPVVRPQPTRFADECCMYGDDDIAGCHVM

Transcript Sequence

Transcript ID

Os08t0205500-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:6161997:6163054:-1 gene:Os08g0205500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Heavy metal-associated domain, HMA domain containing protein. (Os08t0205500-00)
Sequence

ATGCAGAGAGTTGAGCTGAAGGTGAGTGTCAACTGCTGCGACGGATGCCGGAGCAAGGTG
CTCAAAGCCCTCAACCTTAAAGGCGTGCTGAGGACGGAGGTCCACCCGACGGCCGGCAGG
GTGGCGGTCGTCGGCGACGTGGACGCCGGTCGCCTCGTCAAGAGGCTCGCCAAGGTCGGC
AAGATCGCCGAGGTGATCGTCGTCGCGCAGCCGTCGCCGGAGGTGGAGAGGAGGAGGCGC
GACGTCGGCGGCAGCAAGAAGGAGGCGTCGCCGGACAACGGGAAGATGGGCGGCGGCACG
GCGCCGAAACACGGCGGCGCCGACGACGACAAGCGCGGCGAGACGAATGGCGGCGCAGGG
AGCGGGGCTAGCTCAGCTCGAATCCATGGCGGTGGCGACGACGACGTGAAGGCGGCCATG
TGCTGCTACCACCGGGCGGAGCCGCCGGCCATGGCCGTGCCCGTGCTGCAGCCACCGTAC
TATGCGGCGAACTTCACAATGCCGCCGCCGCAGCCGCCGGCGGCGGCGTACGGTTTTGGT
GGCTGCTACCACGGGACTCCTTCGCCGGCGATGGCGCTGTGCCGCCGCGGCCGTATTCCG
GTGGTCCGGCCGCAGCCGACCCGGTTCGCCGACGAGTGCTGCATGTACGGCGACGACGAC
ATCGCCGGCTGCCACGTCATGTGA