Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0205150-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:6137622:6141504:1 gene:Os08g0205150 gene_biotype:protein_coding transcript_biotype:protein_coding description:NB-ARC domain containing protein. (Os08t0205150-01)
Sequence	ATGGCCAGCGGGATGGTGGTGAGCGCATCCATGGGGGTGATGAAACCCCTGCTTACAAAG CTCACCGTTCTGATGGGCGATGAGTACAAGAAGCTCAAGGGGGTCAGGAAGCAGGTGTCC TTCCTTAAGGATGAGCTCACCACCATGAGTGCTTTTCTTGAGAAGCTAGCTTTCATGGAT GATGATGGTGGTGAGCTCGATCCGCTGGTGAAGGACTGGAGGAACCATGTCAGAGAGATG ACCTATGACATCGAGGACTGCATCGATGACTTCATGCATCAGCTTGGTGGTGGTGCTGAT GCATCTGGTTTCCTCCAGAAGACGGCTCGCCGTCTCAAGACGCTGCGCGTGCGCCATCAG ATTGCCAACCAGATCGACGAGATCAAGGCTCGTGTGATCGAGGCAAATCAGCGCCGCAGG AGGTATGAGCTTGATGGATGCAGCAATTCCAGAGCTTCTGAGTCTGTGGCTATAGATCCT CGCTTAACAGCGCTCTACCAAAAGGCTGATAATCTTGTGGGTATTGATGGCCCAACAGAA GAGCTAATCCAATTGTTGACAGATGCAGGGCAGCAGAAGCTCATGGTGGTGTCCATTGTG GGATTTGGGGGTCTTGGTAAAACAACACTTGCCAAACAGGTTTATGATAAGATCGGGCAG CAATTTGACTGCAAGGCGTTCGTTTCCGTTTCCCAAAGACCTGATATTGCAAGACTTCTC CGCACCATACAGTCAAAATTTAACATACAGGAGTCTTCCCAAGCTCGTGAGGTTCAAGAC ATCATCGATGACATTAGATACTATTTGGGAAATAAGAGGTACCTTATTGTAGTCGATGAT TTGTGGAAACAAGAAGCATGGAATATTATTCATTGTGCTTTTCCAGAAAATAGTAATGGT AGCAGAGTGATAGTAACCACGCGTGTGGAAGATGTGGCTTGCTGGGCATGTAGCAACCAT CGATACATTTACAAAATGAAGGCCCTCGATAGTGATGACTCAAAAAAATTGTTCTTCAAT AGAGTATTTGGGTTCGAGGATGGCTGCCCCTCACAGTATGAAAAAGTTTCAGCTGAAATA TTAAAAAAGTGTGGAGGTTTGCCACTTGCAATTATTACTATAGCCAGCCTATTAGCTTGT CGACCGGCAAGAATAATGCAAGAATGGGAGAGGATTCGGAATTCTTTGGGCACCCCATTT GGCACAAATCCAAGCTTGGAAGGCATGAGGCAAATTCTAAATCTTAGCTATAAGAATCTT CCTCTTCATCTTAGAACATGCCTCCTTTATCTCGGCAATTATCCAGAGGACTACAAGATC GGTAGGAATGATGTGGTTAGACAGTGGATAGCTGAAGGCTTCGTGAGGAGCTCTCCTGGG CAAGACTTGGAGGATGTTGGACAGAGCTATTTCAATGAGCTTGTCAATAGGGGTTTGATA CAACCTGAGCAGAACTATGATCGGGAGGTGACGGGTTGCAGGGTGCATGATATGATGCTT GATCTGATCTTGAGCAAGTGCAAGGAGGATAATTTTATCAGTGTTGCTTACAGTGGTGAA GACTACCTGTCCATCGCTAGGCAGCATGGGTACAGCAGCAATAAGGTTCGCCGGTTGTCC CTGCAGTTCAAGGCTGCAGAATCAGATTGCACGGTGTTAATAGAAGGCAAAGCAACTCCT GCTCACTTGGCTCAAGTTCGATCAATTTCACTGTTTGAAAAGAGTACAAGTGGTCTCCCA TTATTGTTGCGGTTTAAATATCTCCGAGTGCTGCATATCATGTTGGGTCACGGCTGCGAG CGAGCTGACCTCACTGCCGTTAGCAAATTACTTCAACTAAGGTGTTTGATATTTCTTGAC TATGGTTGTAAGGTAGAGCTCCCTAGTAGAATATGTGATCTTGTGCATTTAGAGACACTG GATATAGCTTGTAATGTTATAACAAGCATCCCGTTAGATATTGTTAGTTTGCCCTGCCTA TCCGACCTGAGGCTTCCAGGGGGTGTGCAGCTCAACTGTTTACCCAACAGCAAGTCTCTA CGCACTCTAGTCATATGCCCTCCCCTGGATATGGACTTCTTCAAGGCCCTTGGCGAGCAG ACCAATCTAAGGGATCTGCGCCTATACTTTGACGGAAAGGAGTCGTCAACAGCTAGTAAC CTTGATTCTCTGGGGTCTTCTGTTGGAAAACTCCAAAACCTCAGAAATTTGAAAATCTAT TTCCAGTTTGGTATCTCTGGTGACAGCCTGATGGGCTCACTGTCTAGATTTCCTCGCAGT ATTGAGATATTGGATATGCAAACTTGTTGCCTCTCCCGAGTTCCCAGATGGATCAACGTT GCTCTCGTTAACCTCCGCCGCCTACATCTGTATGTGTCAGAGGCTAGCACCGATGAGGTT AGTATTCTTGGAGAGCTGCCCTCCCTCGTCTTCCTCGATTTGAATCTGAGGCTGAAGAGC AAGGGCACCATCATGTTCGGAGGTGGTGAGGGGTCATTCCCAGCTCTGGAGGATCTCTTG TTGAGGTGTGTTGGCGATGTTGCCTCACATTCACGGCTGTGCTTCCTGGCGGGTGTAATG CCCAAGCTCCAGAGGCTCGTGCTGCGGTTCTGGATTTGTGAGTTGGGCATCGATACAGCA CCTGTTGGCATGGAGCACCTCTCGAGCCTCCAGCTCATCTTTGTCGACATCTACGTCCTG CAGGAGAAGATAAACGTTTTTCCTCGGGACGCTGTTGAGCATGTGTTCAGGCAAGCCGCA CAAGCGCACCCCAACCAGCCTGCCTTCGAATTCCATTGCTCGGGGTGA

Peptide Sequence

PEP ID	Os08t0205150-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:6137622:6141504:1 gene:Os08g0205150 transcript:Os08t0205150-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:NB-ARC domain containing protein. (Os08t0205150-01)
Sequence	MASGMVVSASMGVMKPLLTKLTVLMGDEYKKLKGVRKQVSFLKDELTTMSAFLEKLAFMD DDGGELDPLVKDWRNHVREMTYDIEDCIDDFMHQLGGGADASGFLQKTARRLKTLRVRHQ IANQIDEIKARVIEANQRRRRYELDGCSNSRASESVAIDPRLTALYQKADNLVGIDGPTE ELIQLLTDAGQQKLMVVSIVGFGGLGKTTLAKQVYDKIGQQFDCKAFVSVSQRPDIARLL RTIQSKFNIQESSQAREVQDIIDDIRYYLGNKRYLIVVDDLWKQEAWNIIHCAFPENSNG SRVIVTTRVEDVACWACSNHRYIYKMKALDSDDSKKLFFNRVFGFEDGCPSQYEKVSAEI LKKCGGLPLAIITIASLLACRPARIMQEWERIRNSLGTPFGTNPSLEGMRQILNLSYKNL PLHLRTCLLYLGNYPEDYKIGRNDVVRQWIAEGFVRSSPGQDLEDVGQSYFNELVNRGLI QPEQNYDREVTGCRVHDMMLDLILSKCKEDNFISVAYSGEDYLSIARQHGYSSNKVRRLS LQFKAAESDCTVLIEGKATPAHLAQVRSISLFEKSTSGLPLLLRFKYLRVLHIMLGHGCE RADLTAVSKLLQLRCLIFLDYGCKVELPSRICDLVHLETLDIACNVITSIPLDIVSLPCL SDLRLPGGVQLNCLPNSKSLRTLVICPPLDMDFFKALGEQTNLRDLRLYFDGKESSTASN LDSLGSSVGKLQNLRNLKIYFQFGISGDSLMGSLSRFPRSIEILDMQTCCLSRVPRWINV ALVNLRRLHLYVSEASTDEVSILGELPSLVFLDLNLRLKSKGTIMFGGGEGSFPALEDLL LRCVGDVASHSRLCFLAGVMPKLQRLVLRFWICELGIDTAPVGMEHLSSLQLIFVDIYVL QEKINVFPRDAVEHVFRQAAQAHPNQPAFEFHCSG

Transcript Sequence

Transcript ID	Os08t0205150-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:6137622:6141504:1 gene:Os08g0205150 gene_biotype:protein_coding transcript_biotype:protein_coding description:NB-ARC domain containing protein. (Os08t0205150-01)
Sequence	GTCTGTTCTCACTCTTTCAGCTCCTCTCCCAGTCTCCCCGTCTACCTCGCATCCAATCCA GAGAGCTGCGGCAGCCGCCTCGTCTGTTGGGAGGCGGCATCTCGAGCAGTGTCGAGCTCC GGCGCTGGGACGGCGTGGGCAGCAGCTCGCGCTCCAGCTTGGCGACGGCGGTGACGGCGG CAGCAGGCTCGCGGACTCCGGCGCACGGCGGCATGAGCTTTTTGTTCAGCTGATGTTTGC TTTCCTGTGAAAATGTGGGGAAGGTGAAGGAAAAAAAATCCAGAACAAGATTCGGAAGTA CGCTACTGTTCATCCAATCTTTTGCTACAAACGGGCCAATCTGCGTGAAGGCATGGCCAG CGGGATGGTGGTGAGCGCATCCATGGGGGTGATGAAACCCCTGCTTACAAAGCTCACCGT TCTGATGGGCGATGAGTACAAGAAGCTCAAGGGGGTCAGGAAGCAGGTGTCCTTCCTTAA GGATGAGCTCACCACCATGAGTGCTTTTCTTGAGAAGCTAGCTTTCATGGATGATGATGG TGGTGAGCTCGATCCGCTGGTGAAGGACTGGAGGAACCATGTCAGAGAGATGACCTATGA CATCGAGGACTGCATCGATGACTTCATGCATCAGCTTGGTGGTGGTGCTGATGCATCTGG TTTCCTCCAGAAGACGGCTCGCCGTCTCAAGACGCTGCGCGTGCGCCATCAGATTGCCAA CCAGATCGACGAGATCAAGGCTCGTGTGATCGAGGCAAATCAGCGCCGCAGGAGGTATGA GCTTGATGGATGCAGCAATTCCAGAGCTTCTGAGTCTGTGGCTATAGATCCTCGCTTAAC AGCGCTCTACCAAAAGGCTGATAATCTTGTGGGTATTGATGGCCCAACAGAAGAGCTAAT CCAATTGTTGACAGATGCAGGGCAGCAGAAGCTCATGGTGGTGTCCATTGTGGGATTTGG GGGTCTTGGTAAAACAACACTTGCCAAACAGGTTTATGATAAGATCGGGCAGCAATTTGA CTGCAAGGCGTTCGTTTCCGTTTCCCAAAGACCTGATATTGCAAGACTTCTCCGCACCAT ACAGTCAAAATTTAACATACAGGAGTCTTCCCAAGCTCGTGAGGTTCAAGACATCATCGA TGACATTAGATACTATTTGGGAAATAAGAGGTACCTTATTGTAGTCGATGATTTGTGGAA ACAAGAAGCATGGAATATTATTCATTGTGCTTTTCCAGAAAATAGTAATGGTAGCAGAGT GATAGTAACCACGCGTGTGGAAGATGTGGCTTGCTGGGCATGTAGCAACCATCGATACAT TTACAAAATGAAGGCCCTCGATAGTGATGACTCAAAAAAATTGTTCTTCAATAGAGTATT TGGGTTCGAGGATGGCTGCCCCTCACAGTATGAAAAAGTTTCAGCTGAAATATTAAAAAA GTGTGGAGGTTTGCCACTTGCAATTATTACTATAGCCAGCCTATTAGCTTGTCGACCGGC AAGAATAATGCAAGAATGGGAGAGGATTCGGAATTCTTTGGGCACCCCATTTGGCACAAA TCCAAGCTTGGAAGGCATGAGGCAAATTCTAAATCTTAGCTATAAGAATCTTCCTCTTCA TCTTAGAACATGCCTCCTTTATCTCGGCAATTATCCAGAGGACTACAAGATCGGTAGGAA TGATGTGGTTAGACAGTGGATAGCTGAAGGCTTCGTGAGGAGCTCTCCTGGGCAAGACTT GGAGGATGTTGGACAGAGCTATTTCAATGAGCTTGTCAATAGGGGTTTGATACAACCTGA GCAGAACTATGATCGGGAGGTGACGGGTTGCAGGGTGCATGATATGATGCTTGATCTGAT CTTGAGCAAGTGCAAGGAGGATAATTTTATCAGTGTTGCTTACAGTGGTGAAGACTACCT GTCCATCGCTAGGCAGCATGGGTACAGCAGCAATAAGGTTCGCCGGTTGTCCCTGCAGTT CAAGGCTGCAGAATCAGATTGCACGGTGTTAATAGAAGGCAAAGCAACTCCTGCTCACTT GGCTCAAGTTCGATCAATTTCACTGTTTGAAAAGAGTACAAGTGGTCTCCCATTATTGTT GCGGTTTAAATATCTCCGAGTGCTGCATATCATGTTGGGTCACGGCTGCGAGCGAGCTGA CCTCACTGCCGTTAGCAAATTACTTCAACTAAGGTGTTTGATATTTCTTGACTATGGTTG TAAGGTAGAGCTCCCTAGTAGAATATGTGATCTTGTGCATTTAGAGACACTGGATATAGC TTGTAATGTTATAACAAGCATCCCGTTAGATATTGTTAGTTTGCCCTGCCTATCCGACCT GAGGCTTCCAGGGGGTGTGCAGCTCAACTGTTTACCCAACAGCAAGTCTCTACGCACTCT AGTCATATGCCCTCCCCTGGATATGGACTTCTTCAAGGCCCTTGGCGAGCAGACCAATCT AAGGGATCTGCGCCTATACTTTGACGGAAAGGAGTCGTCAACAGCTAGTAACCTTGATTC TCTGGGGTCTTCTGTTGGAAAACTCCAAAACCTCAGAAATTTGAAAATCTATTTCCAGTT TGGTATCTCTGGTGACAGCCTGATGGGCTCACTGTCTAGATTTCCTCGCAGTATTGAGAT ATTGGATATGCAAACTTGTTGCCTCTCCCGAGTTCCCAGATGGATCAACGTTGCTCTCGT TAACCTCCGCCGCCTACATCTGTATGTGTCAGAGGCTAGCACCGATGAGGTTAGTATTCT TGGAGAGCTGCCCTCCCTCGTCTTCCTCGATTTGAATCTGAGGCTGAAGAGCAAGGGCAC CATCATGTTCGGAGGTGGTGAGGGGTCATTCCCAGCTCTGGAGGATCTCTTGTTGAGGTG TGTTGGCGATGTTGCCTCACATTCACGGCTGTGCTTCCTGGCGGGTGTAATGCCCAAGCT CCAGAGGCTCGTGCTGCGGTTCTGGATTTGTGAGTTGGGCATCGATACAGCACCTGTTGG CATGGAGCACCTCTCGAGCCTCCAGCTCATCTTTGTCGACATCTACGTCCTGCAGGAGAA GATAAACGTTTTTCCTCGGGACGCTGTTGAGCATGTGTTCAGGCAAGCCGCACAAGCGCA CCCCAACCAGCCTGCCTTCGAATTCCATTGCTCGGGGTGATTGATCCTGTGTCTGAATTC TGATCCTATGTGTGTATGTAACAAGTCGTGGAAACAGCAACAGCTCAGTGGTTTCTCCTG TTTGTGGTACTACAACATTATTATAACTGTAATTAATAAAGAGCATTTCACAATT