Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0199300-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:5746738:5751829:1 gene:Os08g0199300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YchF domain-containing protein 1 description:Similar to YyaF/YCHF TRANSFAC/OBG family small GTpase plus RNA binding domain TGS (Fragment). (Os08t0199300-01)
Sequence	ATGCCGCCCAAGGCGTCCAAGAAGGACGCCGCCCCCGCCGAGCGCCCCATCCTCGGCCGC TTCTCCTCCCACCTCAAGATCGGGATCGTTGGGTTACCAAATGTTGGCAAATCCACTTTC TTTAACATAGTAACAAAGCTGTCTATCCCAGCTGAGAACTTCCCTTTCTGTACCATCGAC CCAAATGAGGCACGGGTATATGTTCCAGATGAGAGATTTGATTGGCTTTGTCAACTTTAC AAGCCAAAGAGTGAGGTGTCTGCATATCTAGAAATCAATGACATAGCCGGGCTTGTTAGA GGAGCCCATGCTGGGGAGGGTTTGGGCAATGCCTTCCTATCCCATATACGCGCTGTTGAT GGAATTTTTCATGTATTGAGAGCATTTGAAGACAAAGAAGTTACTCATATTGATGATTCA GTGGATCCTGTTAGAGATTTGGAAACTATTGGTGAAGAGCTGAGACTCAAGGACATTGAG TTTGTGCAGAACAAAATTGATGACCTTGAGAAATCAATGAAGAGAAGCAATGATAAGCAG CTGAAACTCGAGCATGAATTATGTGAGAAGGTCAAAGCCCATCTTGAAGATGGAAAGGAT GTCCGCTTTGGAGATTGGAAAAGTGCTGACATTGAGATCTTGAATACCTTCCAGCTACTT ACAGCTAAGCCAGTTGTCTATTTGGTGAACATGAGTGAGAAGGACTACCAGAGGAAAAAG AACAAGTTCCTACCTAAGATACATGCCTGGGTTCAGGAACATGGTGGTGAAACTATTATT CCTTTTAGCTGTGCTTTTGAAAGGTTGCTAGCGGATATGCCCCCGGATGAAGCTGCTAAA TATTGTGCTGAAAACCAGATTGCAAGTGTGATCCCAAAAATTATCAAGACTGGTTTTGCA GCAATCCATCTTATATACTTTTTCACTGCTGGCCCTGACGAGGTAAAGTGTTGGCAGATC AGACGTCAAACTAAAGCACCTCAAGCTGCTGGTACAATTCACACTGATTTTGAGAGAGGC TTCATATGCGCTGAGGTAATGAAGTTCGACGATCTAAAAGAACTGGGTAGTGAATCTGCT GTGAAGGCTGCTGGAAAATACAGGCAGGAAGGGAAGACCTACGTGGTACAGGACGGGGAT ATCATCTTCTTTAAATTTAACGTGTCTGGAGGTGGAAAGAAGTGA

Peptide Sequence

PEP ID	Os08t0199300-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:5746738:5751829:1 gene:Os08g0199300 transcript:Os08t0199300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YchF domain-containing protein 1 description:Similar to YyaF/YCHF TRANSFAC/OBG family small GTpase plus RNA binding domain TGS (Fragment). (Os08t0199300-01)
Sequence	MPPKASKKDAAPAERPILGRFSSHLKIGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTID PNEARVYVPDERFDWLCQLYKPKSEVSAYLEINDIAGLVRGAHAGEGLGNAFLSHIRAVD GIFHVLRAFEDKEVTHIDDSVDPVRDLETIGEELRLKDIEFVQNKIDDLEKSMKRSNDKQ LKLEHELCEKVKAHLEDGKDVRFGDWKSADIEILNTFQLLTAKPVVYLVNMSEKDYQRKK NKFLPKIHAWVQEHGGETIIPFSCAFERLLADMPPDEAAKYCAENQIASVIPKIIKTGFA AIHLIYFFTAGPDEVKCWQIRRQTKAPQAAGTIHTDFERGFICAEVMKFDDLKELGSESA VKAAGKYRQEGKTYVVQDGDIIFFKFNVSGGGKK

Transcript Sequence

Transcript ID	Os08t0199300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:5746738:5751829:1 gene:Os08g0199300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YchF domain-containing protein 1 description:Similar to YyaF/YCHF TRANSFAC/OBG family small GTpase plus RNA binding domain TGS (Fragment). (Os08t0199300-01)
Sequence	CCTTCTTCTTCCCTCACCCCCTTTTCCCACCAAAAACCCTAGCCTCCCCCTCCTCTTCCA GATTCATCGCCGCCGCGCCGCCCCGAGCCCAGAGTAGCCGGCGACGATGCCGCCCAAGGC GTCCAAGAAGGACGCCGCCCCCGCCGAGCGCCCCATCCTCGGCCGCTTCTCCTCCCACCT CAAGATCGGGATCGTTGGGTTACCAAATGTTGGCAAATCCACTTTCTTTAACATAGTAAC AAAGCTGTCTATCCCAGCTGAGAACTTCCCTTTCTGTACCATCGACCCAAATGAGGCACG GGTATATGTTCCAGATGAGAGATTTGATTGGCTTTGTCAACTTTACAAGCCAAAGAGTGA GGTGTCTGCATATCTAGAAATCAATGACATAGCCGGGCTTGTTAGAGGAGCCCATGCTGG GGAGGGTTTGGGCAATGCCTTCCTATCCCATATACGCGCTGTTGATGGAATTTTTCATGT ATTGAGAGCATTTGAAGACAAAGAAGTTACTCATATTGATGATTCAGTGGATCCTGTTAG AGATTTGGAAACTATTGGTGAAGAGCTGAGACTCAAGGACATTGAGTTTGTGCAGAACAA AATTGATGACCTTGAGAAATCAATGAAGAGAAGCAATGATAAGCAGCTGAAACTCGAGCA TGAATTATGTGAGAAGGTCAAAGCCCATCTTGAAGATGGAAAGGATGTCCGCTTTGGAGA TTGGAAAAGTGCTGACATTGAGATCTTGAATACCTTCCAGCTACTTACAGCTAAGCCAGT TGTCTATTTGGTGAACATGAGTGAGAAGGACTACCAGAGGAAAAAGAACAAGTTCCTACC TAAGATACATGCCTGGGTTCAGGAACATGGTGGTGAAACTATTATTCCTTTTAGCTGTGC TTTTGAAAGGTTGCTAGCGGATATGCCCCCGGATGAAGCTGCTAAATATTGTGCTGAAAA CCAGATTGCAAGTGTGATCCCAAAAATTATCAAGACTGGTTTTGCAGCAATCCATCTTAT ATACTTTTTCACTGCTGGCCCTGACGAGGTAAAGTGTTGGCAGATCAGACGTCAAACTAA AGCACCTCAAGCTGCTGGTACAATTCACACTGATTTTGAGAGAGGCTTCATATGCGCTGA GGTAATGAAGTTCGACGATCTAAAAGAACTGGGTAGTGAATCTGCTGTGAAGGCTGCTGG AAAATACAGGCAGGAAGGGAAGACCTACGTGGTACAGGACGGGGATATCATCTTCTTTAA ATTTAACGTGTCTGGAGGTGGAAAGAAGTGAGTCAATGTTTGAAGGTGATAGCGTTCCGA CAGAGTGGTGCATTTTACTTTAAACTTCTACACTTAGCTCTGTAGCAATAAACAAGTTAT GATTCGATATTTTGTACCATGAGGCTATAAAATTATCCAAGGATTGTATGATGAGGCTTT AAATCATTGAAGAAAAAGTGTACGGTTTTGCAATACAAGCATTCTTGGCATGTTTGTCTT GCCTGGGTCTACATCTGTAATATTAATGGATAACTGCCGTGCATGTTTGGACAACTCGCT GTCATGCAGTCAAATGTGGTTCTTTCCCCACGGT