Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0197900-00
CDS Infomation

cds chromosome:IRGSP-1.0:8:5658727:5659464:1 gene:Os08g0197900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os08t0197900-00)
Sequence

ATGTGTTCGACGAAATGCCCCCGAAGAAAGCCAAGCCGTCCCGCGGGGGCGGCGCTGCGG
AAGACCGGCTCAGCGCCCTCCCCGACGCGGTCCTGCACCACGTCATGTCGTTCCTGCGGG
CGTGGGAGGTGGCGCGCACCTGCGTGCTCTCCCGCCGCTGGCGCCACCTCTGGGCCTCCG
CGCCCTGCGTCGACCTCCGGCGTCTGGGGCGGCGGAGGCCACCTTCCGCCGCCGGAGCGG
CTCGCCAGGTTCGCCTACCGGTTGCTGTTCGAGCGGGAGGTGTCAGCGCCGGTGGACATT
CTCCGGGTGATGTCCAGCCCCGACGGCGAAGGGGAGGAGGATTACACCACTTCAGATGTC
CAGACGTGGATCCGTGCCGCCATCAAGCGGAGAGCTCGGGTGATCCAGCTTACCGACCAT
CCAATGGATGAGGCGTTCTTTAACCTGGGCTTCGTCCCCATCATCTCCTGCCACCTCAAA
CACCTGAAGCTGTCTGGTTCTTTACTGTGGAACACGACGCTAATGCAGCTCTCTTCTCAG
TGCCCTGCTTTGGAAATTCTAGAGCTCAAGAAATGTTCTCTGCACGGCCATGAGATTTCA
TCCACCTCTCTCAAGAGCTTGACCATGGTGAAGTGCAGGATCATGGCAGATGTCACCATT
GCTGCTCCGAACCTCGTGTCTCTGCGGCTCTGCGCTGCATCAAGCCATACCACCGAGCTC
CCTTGTTCGAGGATATAG

Peptide Sequence

PEP ID

Os08t0197900-00
PEP Infomation

pep chromosome:IRGSP-1.0:8:5658727:5659464:1 gene:Os08g0197900 transcript:Os08t0197900-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os08t0197900-00)
Sequence

MCSTKCPRRKPSRPAGAALRKTGSAPSPTRSCTTSCRSCGRGRWRAPACSPAAGATSGPP
RPASTSGVWGGGGHLPPPERLARFAYRLLFEREVSAPVDILRVMSSPDGEGEEDYTTSDV
QTWIRAAIKRRARVIQLTDHPMDEAFFNLGFVPIISCHLKHLKLSGSLLWNTTLMQLSSQ
CPALEILELKKCSLHGHEISSTSLKSLTMVKCRIMADVTIAAPNLVSLRLCAASSHTTEL
PCSRI

Transcript Sequence

Transcript ID

Os08t0197900-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:5658727:5659464:1 gene:Os08g0197900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os08t0197900-00)
Sequence

ATGTGTTCGACGAAATGCCCCCGAAGAAAGCCAAGCCGTCCCGCGGGGGCGGCGCTGCGG
AAGACCGGCTCAGCGCCCTCCCCGACGCGGTCCTGCACCACGTCATGTCGTTCCTGCGGG
CGTGGGAGGTGGCGCGCACCTGCGTGCTCTCCCGCCGCTGGCGCCACCTCTGGGCCTCCG
CGCCCTGCGTCGACCTCCGGCGTCTGGGGCGGCGGAGGCCACCTTCCGCCGCCGGAGCGG
CTCGCCAGGTTCGCCTACCGGTTGCTGTTCGAGCGGGAGGTGTCAGCGCCGGTGGACATT
CTCCGGGTGATGTCCAGCCCCGACGGCGAAGGGGAGGAGGATTACACCACTTCAGATGTC
CAGACGTGGATCCGTGCCGCCATCAAGCGGAGAGCTCGGGTGATCCAGCTTACCGACCAT
CCAATGGATGAGGCGTTCTTTAACCTGGGCTTCGTCCCCATCATCTCCTGCCACCTCAAA
CACCTGAAGCTGTCTGGTTCTTTACTGTGGAACACGACGCTAATGCAGCTCTCTTCTCAG
TGCCCTGCTTTGGAAATTCTAGAGCTCAAGAAATGTTCTCTGCACGGCCATGAGATTTCA
TCCACCTCTCTCAAGAGCTTGACCATGGTGAAGTGCAGGATCATGGCAGATGTCACCATT
GCTGCTCCGAACCTCGTGTCTCTGCGGCTCTGCGCTGCATCAAGCCATACCACCGAGCTC
CCTTGTTCGAGGATATAG