Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0197000-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:5609250:5612337:1 gene:Os08g0197000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 420 description:Cyclin-like F-box domain containing protein. (Os08t0197000-01)
Sequence	ATGCAGCAGGGAGCGGCGGGGCAGGCTGGGCCGTCGGGTGGTGGTGGAGGCGGTGGCGGT GGCGGTGGCGGTGGCGCGGACCGCCTCAGCGCGCTCCCGGACGCGGTGCTCTTCCGGATC GTGTCGCACCTGGGGGCGCGGCAGGCGGTGCGCACGAGCGTGCTATCCAAGCGGTGGCGC CACGTGTGGGCGTCCGCGCCGCGCGTCGACGTCCGCCACCCCTGCGCCTGCGACGAGAGC GCCGACCAGGAGAGGTTCCACGGCTTCGTCACCACCATGCTCCTCAGGCGCCGCCCGTTC GCCCCCATCAAGGCGCTCCGGCTGTGCTGGAGCCACGACGGCGACGCCAACAACTGGATC GCTCATGCTGTCAGGCGTGGGGCCGAAGAAATCGATTTCTCCGCGAGGCATCACCAAGAT GATCCGAAACCGGAGCTAGAGTACACGAGCTTCATTTCTCACAAGATCAAGATCTTGAAG CTGACGCGTGTCCGGATGGGCATCAAGTTTATCACGCAGATCTGCTATAGGTGCACTTTT TTGGAAGAATTAGAGCTCAAGAATGTTAATTCACTTGAAGGGCAGATTCAATCGACCTCG CTGAAGCGCTTGTCTATCATCAACTGCCTTATCTCTGATGGATTTTTGGTTGATGCTCCG AACCTTATCTCGCTCTGCTTCTTCAGACCTCTCAGCGGTAAGAGCACGGAGGGAGCCAAT CACTCGTCTGATAATAGGAGTTGGCCATTCTCAGCGTCAGTGTGGGAGTTTGATGACGAT GGATCTGATCATGATGATGATTTCTTTGCAATTGCTAGTGGTGGTGAACACTTTGATGAT AAGAGAGACAATGAATCTGATCAAGACAATGGTTCTAGTGATGAAGACTCAGATGATAAG AGAGACCAAGAATCTGATCATGATGAAGATGTTCCCTCTTCCCCATATTCTGATTCTAAG GACTCCTGTGATGGCAGTGACAGTGAATGCGAGTCTTATGAATCCAGTGATAAGGAGGGT GATGATCTTGAAGATTGCGACAGCAATGATATGTTGGAAAACTTGATCAAGGTAGCTAGG GGCTTGACAGCTTATCATGGAGAGGTGCTTCTGAGGAGGCAATTGGAAAATTTCCCCATG TTCAATAACCTGAAAACTCTGTCCCTTGGTGAATGGTGTATGGTTCCTGACTTCAGTGCT TTGTCAACCATACTTAAGAAATCACCTAAGGTAGAAAGGCTTTATCTTCACCTTGACATG ATCCACAGAGGAAGAGGGGACATCGATCCAAGTGGAGGATCATTTGCTTGCAACAACCTG AGGAAGGTTAAGATCACATGTTGTAAAGATGATGAAATGGTCCATATGCTGAAACAATTC CTCCAACGTAACGGCATATCACTTGAGAAGATTGTTCATCACACTTCTAGCACTCATAAT GGCGAAGAAGACGGAGGCGGGGACTCCAGTGCGAAACGGAAGGCGCAAGGCGAAGTTGCG AGGCTAGCAGTGAAACAGAGGAGGGCGCGAAACAGTAGAAGCCCGGAGTGA

Peptide Sequence

PEP ID	Os08t0197000-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:5609250:5612337:1 gene:Os08g0197000 transcript:Os08t0197000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 420 description:Cyclin-like F-box domain containing protein. (Os08t0197000-01)
Sequence	MQQGAAGQAGPSGGGGGGGGGGGGGADRLSALPDAVLFRIVSHLGARQAVRTSVLSKRWR HVWASAPRVDVRHPCACDESADQERFHGFVTTMLLRRRPFAPIKALRLCWSHDGDANNWI AHAVRRGAEEIDFSARHHQDDPKPELEYTSFISHKIKILKLTRVRMGIKFITQICYRCTF LEELELKNVNSLEGQIQSTSLKRLSIINCLISDGFLVDAPNLISLCFFRPLSGKSTEGAN HSSDNRSWPFSASVWEFDDDGSDHDDDFFAIASGGEHFDDKRDNESDQDNGSSDEDSDDK RDQESDHDEDVPSSPYSDSKDSCDGSDSECESYESSDKEGDDLEDCDSNDMLENLIKVAR GLTAYHGEVLLRRQLENFPMFNNLKTLSLGEWCMVPDFSALSTILKKSPKVERLYLHLDM IHRGRGDIDPSGGSFACNNLRKVKITCCKDDEMVHMLKQFLQRNGISLEKIVHHTSSTHN GEEDGGGDSSAKRKAQGEVARLAVKQRRARNSRSPE

Transcript Sequence

Transcript ID	Os08t0197000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:5609250:5612337:1 gene:Os08g0197000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 420 description:Cyclin-like F-box domain containing protein. (Os08t0197000-01)
Sequence	GAAGCAGGCCCGTCCTCGATTCGCCAAAAAAGCAAGTCCCCAATCTCTCCGCAACCTGTT CGACGGAATGCAGCAGGGAGCGGCGGGGCAGGCTGGGCCGTCGGGTGGTGGTGGAGGCGG TGGCGGTGGCGGTGGCGGTGGCGCGGACCGCCTCAGCGCGCTCCCGGACGCGGTGCTCTT CCGGATCGTGTCGCACCTGGGGGCGCGGCAGGCGGTGCGCACGAGCGTGCTATCCAAGCG GTGGCGCCACGTGTGGGCGTCCGCGCCGCGCGTCGACGTCCGCCACCCCTGCGCCTGCGA CGAGAGCGCCGACCAGGAGAGGTTCCACGGCTTCGTCACCACCATGCTCCTCAGGCGCCG CCCGTTCGCCCCCATCAAGGCGCTCCGGCTGTGCTGGAGCCACGACGGCGACGCCAACAA CTGGATCGCTCATGCTGTCAGGCGTGGGGCCGAAGAAATCGATTTCTCCGCGAGGCATCA CCAAGATGATCCGAAACCGGAGCTAGAGTACACGAGCTTCATTTCTCACAAGATCAAGAT CTTGAAGCTGACGCGTGTCCGGATGGGCATCAAGTTTATCACGCAGATCTGCTATAGGTG CACTTTTTTGGAAGAATTAGAGCTCAAGAATGTTAATTCACTTGAAGGGCAGATTCAATC GACCTCGCTGAAGCGCTTGTCTATCATCAACTGCCTTATCTCTGATGGATTTTTGGTTGA TGCTCCGAACCTTATCTCGCTCTGCTTCTTCAGACCTCTCAGCGGTAAGAGCACGGAGGG AGCCAATCACTCGTCTGATAATAGGAGTTGGCCATTCTCAGCGTCAGTGTGGGAGTTTGA TGACGATGGATCTGATCATGATGATGATTTCTTTGCAATTGCTAGTGGTGGTGAACACTT TGATGATAAGAGAGACAATGAATCTGATCAAGACAATGGTTCTAGTGATGAAGACTCAGA TGATAAGAGAGACCAAGAATCTGATCATGATGAAGATGTTCCCTCTTCCCCATATTCTGA TTCTAAGGACTCCTGTGATGGCAGTGACAGTGAATGCGAGTCTTATGAATCCAGTGATAA GGAGGGTGATGATCTTGAAGATTGCGACAGCAATGATATGTTGGAAAACTTGATCAAGGT AGCTAGGGGCTTGACAGCTTATCATGGAGAGGTGCTTCTGAGGAGGCAATTGGAAAATTT CCCCATGTTCAATAACCTGAAAACTCTGTCCCTTGGTGAATGGTGTATGGTTCCTGACTT CAGTGCTTTGTCAACCATACTTAAGAAATCACCTAAGGTAGAAAGGCTTTATCTTCACCT TGACATGATCCACAGAGGAAGAGGGGACATCGATCCAAGTGGAGGATCATTTGCTTGCAA CAACCTGAGGAAGGTTAAGATCACATGTTGTAAAGATGATGAAATGGTCCATATGCTGAA ACAATTCCTCCAACGTAACGGCATATCACTTGAGAAGATTGTTCATCACACTTCTAGCAC TCATAATGGCGAAGAAGACGGAGGCGGGGACTCCAGTGCGAAACGGAAGGCGCAAGGCGA AGTTGCGAGGCTAGCAGTGAAACAGAGGAGGGCGCGAAACAGTAGAAGCCCGGAGTGAGG GGAACATGTTTAAAATGCTGAGGAATCCAGTGCTGAGTTTACATTGCAGTTAGCAGTAGA ATTCTTCACAGGATGTGTATATGCATCAAATCTAGTACAGGTACTTTGGGGACATGAAAA ATTATGCATCCGTTGGTGTTGCATGAAAATAGATCGTTGGTCAATGTTCAGTGACTTGGA ATCCTGTGAATTGCTATATGCCTATATCATGTTTGATGTATTGAGTAGTAATTGGCAGCG GCT