Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0196900-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:5602622:5607315:1 gene:Os08g0196900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:KIX domain protein 5, F-box protein 270, F-box protein 419, endosperm-specific gene 118 description:Hypothetical conserved gene. (Os08t0196900-01)
Sequence	ATGGACGAGTTAGGGATCATCGAGCAAGGCGTCGACTGGAGGACTCGCCTTGGCCAAGAC ATTCGCGATTGCATGATAAATGATATATTGTTCAGCCTGCAAACGAAATTGCAAAGTACT ACTACAGCATTGATTGATCTCCAGAAGGTTGCTGTCAGAATAGAGGAGAGGATCCATACG ATAGCTAGTGACTATGGTGATTATCTACGGAGGATTTGTCTGACAAGAGGTGATTTGGAC TCATATGATGTATTTTTGAATGATTGTCAACGTCAGCAAGCTTCAATCCGTTCATCCATC TTGCTCCATCAGGAGAATAAGCAAGGTGATCAAATTGTCCAGGCAAAAAGAAATATTAAG GGGACATCATCTAGCAGTGTGCTATCTAATCAAGTAGCCCTAAATGACCACAAGGAGCAC TCACACCCCTACGAGAAGGATATGATCAGCAAACTCCCTAACGATTTGGTCCAACATATT ATGTCATTCTTGTCAATGCGAGAGGCTGTGCGCACCAGTGTTTTGTCCCATTGGTGGGTC AACCAGTGGACCTTCTTGAAGTCCATTCAGCTTAATATATATTGGTTTCATATGGACAGA GAAAAATTCAGTAGTTTCCTTGACAAACTATTGCTAAGCCGTGTCCAAGCTGATGCTCCC ATGGACACATTCGAGCTAAAATCTTTTGCAATTGACCGCGCCAATTATTGGATTAATCAT GCAATCAAGCACAATGCTAAAGTGCTTAAATTTGCTGAATATGGAAAATGGGAACCTTTC TACTTGGATCCAAATCTTGTGGAGTTAAGTTCTCGGTATCTAGAAACTTTGGAGCTGACT AATGTTGCTCTAGATGCGACGATATTCAATCAGTTGGCCAATGCATGCCCAGCATTGCAA AATATGCTGCTGACAGACTGCTTACTGGAGGTAGAAGAAATTTCATCAAGCTCATTGAAG AATCTGGATATAATTGACTGCTATATTCTCAAGGACCTGAGCATTTGTACTCCTAGTTTG GTTTCATTGTGCATCAAGAATGAAAGAACAGACAATTCTTCGTTCAGAAACTCTTACCTA ATATTCGCAACGGCCATTATCATTGATGCTTCAAATGTCAGTAGCATGGAGTTGTTAGCT ATGGATAGACAGTTCACATTCGTGGAGAAAGACGGGGGCGAGCCAATGTTCAAGAATCTC AGAAACTTGAGCCTAGGTCTATGGTGCATTAACAACATGTTTTCGCCTCTACGTCGATTC GTCCGGCATTCGCCTATGCTGAGGATGGTGACTCTGAGGATCAGTCCGCTGGATTGGAAG TCCCATCTCACGAAGGAACATCAGGAGATGCTGATCAGCATTCGTGATCGTCGTGGCCTG ATTCTTTATATCGATTGGTATTGA

Peptide Sequence

PEP ID	Os08t0196900-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:5602622:5607315:1 gene:Os08g0196900 transcript:Os08t0196900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:KIX domain protein 5, F-box protein 270, F-box protein 419, endosperm-specific gene 118 description:Hypothetical conserved gene. (Os08t0196900-01)
Sequence	MDELGIIEQGVDWRTRLGQDIRDCMINDILFSLQTKLQSTTTALIDLQKVAVRIEERIHT IASDYGDYLRRICLTRGDLDSYDVFLNDCQRQQASIRSSILLHQENKQGDQIVQAKRNIK GTSSSSVLSNQVALNDHKEHSHPYEKDMISKLPNDLVQHIMSFLSMREAVRTSVLSHWWV NQWTFLKSIQLNIYWFHMDREKFSSFLDKLLLSRVQADAPMDTFELKSFAIDRANYWINH AIKHNAKVLKFAEYGKWEPFYLDPNLVELSSRYLETLELTNVALDATIFNQLANACPALQ NMLLTDCLLEVEEISSSSLKNLDIIDCYILKDLSICTPSLVSLCIKNERTDNSSFRNSYL IFATAIIIDASNVSSMELLAMDRQFTFVEKDGGEPMFKNLRNLSLGLWCINNMFSPLRRF VRHSPMLRMVTLRISPLDWKSHLTKEHQEMLISIRDRRGLILYIDWY

Transcript Sequence

Transcript ID	Os08t0196900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:5602622:5607315:1 gene:Os08g0196900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:KIX domain protein 5, F-box protein 270, F-box protein 419, endosperm-specific gene 118 description:Hypothetical conserved gene. (Os08t0196900-01)
Sequence	ATCTCTAAGCACTTCTACCTAACGAAACCAAAGAGGAGAAGACTTGTGTTAGTCGGTGCC ATGGACGAGTTAGGGATCATCGAGCAAGGCGTCGACTGGAGGACTCGCCTTGGCCAAGAC ATTCGCGATTGCATGATAAATGATATATTGTTCAGCCTGCAAACGAAATTGCAAAGTACT ACTACAGCATTGATTGATCTCCAGAAGGTTGCTGTCAGAATAGAGGAGAGGATCCATACG ATAGCTAGTGACTATGGTGATTATCTACGGAGGATTTGTCTGACAAGAGGTGATTTGGAC TCATATGATGTATTTTTGAATGATTGTCAACGTCAGCAAGCTTCAATCCGTTCATCCATC TTGCTCCATCAGGAGAATAAGCAAGGTGATCAAATTGTCCAGGCAAAAAGAAATATTAAG GGGACATCATCTAGCAGTGTGCTATCTAATCAAGTAGCCCTAAATGACCACAAGGAGCAC TCACACCCCTACGAGAAGGATATGATCAGCAAACTCCCTAACGATTTGGTCCAACATATT ATGTCATTCTTGTCAATGCGAGAGGCTGTGCGCACCAGTGTTTTGTCCCATTGGTGGGTC AACCAGTGGACCTTCTTGAAGTCCATTCAGCTTAATATATATTGGTTTCATATGGACAGA GAAAAATTCAGTAGTTTCCTTGACAAACTATTGCTAAGCCGTGTCCAAGCTGATGCTCCC ATGGACACATTCGAGCTAAAATCTTTTGCAATTGACCGCGCCAATTATTGGATTAATCAT GCAATCAAGCACAATGCTAAAGTGCTTAAATTTGCTGAATATGGAAAATGGGAACCTTTC TACTTGGATCCAAATCTTGTGGAGTTAAGTTCTCGGTATCTAGAAACTTTGGAGCTGACT AATGTTGCTCTAGATGCGACGATATTCAATCAGTTGGCCAATGCATGCCCAGCATTGCAA AATATGCTGCTGACAGACTGCTTACTGGAGGTAGAAGAAATTTCATCAAGCTCATTGAAG AATCTGGATATAATTGACTGCTATATTCTCAAGGACCTGAGCATTTGTACTCCTAGTTTG GTTTCATTGTGCATCAAGAATGAAAGAACAGACAATTCTTCGTTCAGAAACTCTTACCTA ATATTCGCAACGGCCATTATCATTGATGCTTCAAATGTCAGTAGCATGGAGTTGTTAGCT ATGGATAGACAGTTCACATTCGTGGAGAAAGACGGGGGCGAGCCAATGTTCAAGAATCTC AGAAACTTGAGCCTAGGTCTATGGTGCATTAACAACATGTTTTCGCCTCTACGTCGATTC GTCCGGCATTCGCCTATGCTGAGGATGGTGACTCTGAGGATCAGTCCGCTGGATTGGAAG TCCCATCTCACGAAGGAACATCAGGAGATGCTGATCAGCATTCGTGATCGTCGTGGCCTG ATTCTTTATATCGATTGGTATTGAAGGCCAAGGGCTTCTGCGGTGCTCCAATGGTGAATA AAATTGCTGCCAAATTAAGCTGGTTGCTGAAACATTGAGACCAATTTAAGTTTCTTTTCG TTTTAATCGCAGTGGATCAAACTTGTTGCAGTAATAATTACCTGTTACTTGACTGCATGT GTCAGCCTGGAGTCTGGATGTTGTCTTTGATGTGGTGTCATTGTTACTTATACTGTTTCA TTATATGGATGAACCAATGAGTCTTTAAGAACC