Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0193300-00
CDS Infomation

cds chromosome:IRGSP-1.0:8:5446749:5448654:-1 gene:Os08g0193300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 410 description:Hypothetical conserved gene. (Os08t0193300-00)
Sequence

ATGGAGGCGGTGCCAAGCCCCTTACCTGATACTGATAGCGATAGGGATTGGTCTGAGCTC
CCAGTGGATGCACTTTCTGCAATCTTCACGAAACTTGGGACTGTTGAGATCCTAATGGGT
GCAAGCTTTGTGTGCCACTCTTGGTTGGCAGCTTCAAAGTCACCTGAACTGTGGCGGTTC
GTGGACATGACACGCCACAAGGTGATTTTCTCAAAGAGAACTGGCATACTGTGCGCGATG
GCAAAAGCAGCGATAGATCGCTCCGATGGACAGATTGAGTCATTCTGGGCCCAGAAGTTT
GTCACTGGTGAACTCTTGGATTATATTGTGAGAAGGGCCAGTACATTGAAGAGCATTCGA
CTCGTTGCATGCACATTTATTCAGTGGCAATCATTGGCTATGCTTGCTGCTAAGTGTCCA
CTTCTAGAGGAGATAGAGTGCTCATATCATAAAATGCCAGCAGATTTTTTCAAATGTGTT
GGCAGAGTTCGCCCAAATCTGAAGCGCCTAAGAGTCCATATGCACTATTTTGATCAGGAT
GAGCTGGAGAATGAGTTGATTAAGCATGTCCTTGAGGAGGGTGGTGAGGTATTCGAGGAA
CCTTTCGAGCAGAGGGAGGCAAGGCGGAATGCGGATGCCTTCGCGATAGCAGAAAACATG
CATGAGTTACGGCTTCTGCAGATTGCAGGTCATAACCTGACCGAGATAGGGGTGCGCGCC
ATCCTTGATGGCTGCCCCCACCTCGAGTGCCTCGACCTTTCTAGCTGCCACGACATCTAC
GTCGATGGTCAGCTCCAAGCTCGCTTCGCGATGATCAGACATGTCAGGTTGCCAGGTCTC
ATGATGGTGACTGCCCAGATCTCCGTGCCATCGGTGAGAGGGTCACTATGGCTGATCTTT
TCAGAGGTCTCGCTCGCTCTCTGCTTGAGAAGATGGAGATGGGGGATGGTACCTATGGCG
ATGACTAAGTCCCTTCGTCCCCTGACCCCCGTGTCGACTTGA

Peptide Sequence

PEP ID

Os08t0193300-00
PEP Infomation

pep chromosome:IRGSP-1.0:8:5446749:5448654:-1 gene:Os08g0193300 transcript:Os08t0193300-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 410 description:Hypothetical conserved gene. (Os08t0193300-00)
Sequence

MEAVPSPLPDTDSDRDWSELPVDALSAIFTKLGTVEILMGASFVCHSWLAASKSPELWRF
VDMTRHKVIFSKRTGILCAMAKAAIDRSDGQIESFWAQKFVTGELLDYIVRRASTLKSIR
LVACTFIQWQSLAMLAAKCPLLEEIECSYHKMPADFFKCVGRVRPNLKRLRVHMHYFDQD
ELENELIKHVLEEGGEVFEEPFEQREARRNADAFAIAENMHELRLLQIAGHNLTEIGVRA
ILDGCPHLECLDLSSCHDIYVDGQLQARFAMIRHVRLPGLMMVTAQISVPSVRGSLWLIF
SEVSLALCLRRWRWGMVPMAMTKSLRPLTPVST

Transcript Sequence

Transcript ID

Os08t0193300-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:5446749:5448654:-1 gene:Os08g0193300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 410 description:Hypothetical conserved gene. (Os08t0193300-00)
Sequence

TTTTGTCACTGATGATACCCTCATTTGTAGGCTCTTGTTTGCACGATGGAGGCGGTGCCA
AGCCCCTTACCTGATACTGATAGCGATAGGGATTGGTCTGAGCTCCCAGTGGATGCACTT
TCTGCAATCTTCACGAAACTTGGGACTGTTGAGATCCTAATGGGTGCAAGCTTTGTGTGC
CACTCTTGGTTGGCAGCTTCAAAGTCACCTGAACTGTGGCGGTTCGTGGACATGACACGC
CACAAGGTGATTTTCTCAAAGAGAACTGGCATACTGTGCGCGATGGCAAAAGCAGCGATA
GATCGCTCCGATGGACAGATTGAGTCATTCTGGGCCCAGAAGTTTGTCACTGGTGAACTC
TTGGATTATATTGTGAGAAGGGCCAGTACATTGAAGAGCATTCGACTCGTTGCATGCACA
TTTATTCAGTGGCAATCATTGGCTATGCTTGCTGCTAAGTGTCCACTTCTAGAGGAGATA
GAGTGCTCATATCATAAAATGCCAGCAGATTTTTTCAAATGTGTTGGCAGAGTTCGCCCA
AATCTGAAGCGCCTAAGAGTCCATATGCACTATTTTGATCAGGATGAGCTGGAGAATGAG
TTGATTAAGCATGTCCTTGAGGAGGGTGGTGAGGTATTCGAGGAACCTTTCGAGCAGAGG
GAGGCAAGGCGGAATGCGGATGCCTTCGCGATAGCAGAAAACATGCATGAGTTACGGCTT
CTGCAGATTGCAGGTCATAACCTGACCGAGATAGGGGTGCGCGCCATCCTTGATGGCTGC
CCCCACCTCGAGTGCCTCGACCTTTCTAGCTGCCACGACATCTACGTCGATGGTCAGCTC
CAAGCTCGCTTCGCGATGATCAGACATGTCAGGTTGCCAGGTCTCATGATGGTGACTGCC
CAGATCTCCGTGCCATCGGTGAGAGGGTCACTATGGCTGATCTTTTCAGAGGTCTCGCTC
GCTCTCTGCTTGAGAAGATGGAGATGGGGGATGGTACCTATGGCGATGACTAAGTCCCTT
CGTCCCCTGACCCCCGTGTCGACTTGA