Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0191900-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:5384447:5388799:1 gene:Os08g0191900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os08t0191900-01)
Sequence	ATGGAGGCGGCGGCGGCGATTGGAGGGGCGCGGTCCCCGCTCTCCTTCTCCTCCAGCCTC TGCAATGCAAAAGTATCCTGTGGTTTAGCTCTTCACAATGTGAAGATCAAGAGCAGTCGA AGGCTTGAGGTGGTTTGCCATGGAATGTTGACAACCAGAAAGTTCATGCAGAAGAAGAAG AAAGAGGAGGTATATAAGGATGCTGCTGATGAAGCAGAGCAGAAGAATTGGAGGATGATG ATGAGGGAGATAGAAGAGTCAGGATCAGCTGTCTCCATTCTGAAGACTCAGCGAAGCAAG AAAGAACCACTGCCAAGGGATGCTGTTCTTGGAACTCTTATGCGGTTCAAACAGCTCAAG AAATGGAACCTGGTCAGCGAGATTCTTGAATGGCTACGCACACAACATTGGTGGAACTTC AGTGAGATGGACTTTTTGATGCTTGTTACGGCCTATGGAAAATTAGGAGATTTTAGCAGA GCGGAGAGGGTCCTGAAGTATATGAACAAGAAAGGTTACAAACCAAGCGTGATATCTCAG ACTGCACTGATGGAAGCATATGGAAGAGCCAAGCAGTATCGTAAGGCTGAAGCAGTGTTT CGCAGGATGCAAACATCAGGCCCTGAGCCATCAGCTGTGACATATCAAATCATTTTGAAA TCTTTTGTTGAGGGTGACAAATACAAGGAAGCTGAAGCTATTTTTGAGGACCTTCTTAAT GAGAAAAGAGCTTCTTTTAAGCCTGACCAGAAGATGTTTCATATGATGATTTATATGTAC AAGAAAGCTGGCGACTATGCCCAGGCTCGGAAACTATTTGCTCAGATGTCAGAGAGAGGA ATCCCTCTATCAACAGTCACCTTTAATAGTTTGATGTCATTTGAAACAAATTACAAGGAA GTTTCAAGTATTTATGATCAGATGCAAAGAACTGCGCTAAAACCAGATGTTGTGAGCTAC TCCCTGCTCATCAAAGCTTATGGAAAAGCTAGAAGGGAAGAAGAAGCATTAGCAGTTTTT GAAGAGATGCTTGATGCAGGAGTCAGGCCAACACGCAAGTCGTATAACATTTTGATTGAT GCATTTGCAATATCTGGATTGGTAGAAGAAGCTCATACAGTTTTCAAGGCCATGAGAAGA CACAGGGTTGAGCCTGATCTCTGTTCTTACACAACAATGGTCTTAGCTTATGTGAATGCT TCTGACATGGATGGGGCTGAGAAATTCTTCCGCCGGATTAAAGAGGACGGTTTGAAGCCA AATGTTGTTGTTTATGGAACTTTGATGAAGGGCTACTCGAAATTAAATAATGTTGAGAGA GTAATGAGAGTGTACGAGAGAATGCGGATGCAGGGTGTTGAACCCAATCAGACTATTTAT ACTACCATCATGGATGTGCATGGAAGGAACTCTGATTTTGGAAATGCTGTCATCTGGTTC AAAGAAATGGAGGCTCGTGGGTACCCAGCAGACAAGAAAGCAAAGAATATCCTTCTTTCT CTTGCCAAAACTCCTGAAGAACAAGAAGAAGCGAATGAATTGACAGGGAATTGTGCAATT CAGCTGGAAGCAAAACCCGATGGAACAACATATGGTTTAGAAATAAATGGTACTGGAAAT GAGTATAAACATGGACAAAATGATGCTGGGCATGACAGTTTGTTAGATGGCGCATGCACC ACAAGTAATCGAAATGGTAAAGTCGAGGCTGGGAAAGGTCATTTTGAGGAGGTTAATGAC GATGATGATGATGATGATGACGATGATTACGATGAAGAGTTAAATTTTGTTTCTTTCAAA GATAAGCGAGAACTAAATTTTGCCACTTGA

Peptide Sequence

PEP ID	Os08t0191900-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:5384447:5388799:1 gene:Os08g0191900 transcript:Os08t0191900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os08t0191900-01)
Sequence	MEAAAAIGGARSPLSFSSSLCNAKVSCGLALHNVKIKSSRRLEVVCHGMLTTRKFMQKKK KEEVYKDAADEAEQKNWRMMMREIEESGSAVSILKTQRSKKEPLPRDAVLGTLMRFKQLK KWNLVSEILEWLRTQHWWNFSEMDFLMLVTAYGKLGDFSRAERVLKYMNKKGYKPSVISQ TALMEAYGRAKQYRKAEAVFRRMQTSGPEPSAVTYQIILKSFVEGDKYKEAEAIFEDLLN EKRASFKPDQKMFHMMIYMYKKAGDYAQARKLFAQMSERGIPLSTVTFNSLMSFETNYKE VSSIYDQMQRTALKPDVVSYSLLIKAYGKARREEEALAVFEEMLDAGVRPTRKSYNILID AFAISGLVEEAHTVFKAMRRHRVEPDLCSYTTMVLAYVNASDMDGAEKFFRRIKEDGLKP NVVVYGTLMKGYSKLNNVERVMRVYERMRMQGVEPNQTIYTTIMDVHGRNSDFGNAVIWF KEMEARGYPADKKAKNILLSLAKTPEEQEEANELTGNCAIQLEAKPDGTTYGLEINGTGN EYKHGQNDAGHDSLLDGACTTSNRNGKVEAGKGHFEEVNDDDDDDDDDDYDEELNFVSFK DKRELNFAT

Transcript Sequence

Transcript ID	Os08t0191900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:5384447:5388799:1 gene:Os08g0191900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os08t0191900-01)
Sequence	GGCTCGCTGTCTCATCACTCTGTAACCGATAAGGCTGCCGCCATTGCTGCTGCTGCTGCT GCTTCCGCCGCGTCGCCTTCTCCGGCGATGGAGGCGGCGGCGGCGATTGGAGGGGCGCGG TCCCCGCTCTCCTTCTCCTCCAGCCTCTGCAATGCAAAAGTATCCTGTGGTTTAGCTCTT CACAATGTGAAGATCAAGAGCAGTCGAAGGCTTGAGGTGGTTTGCCATGGAATGTTGACA ACCAGAAAGTTCATGCAGAAGAAGAAGAAAGAGGAGGTATATAAGGATGCTGCTGATGAA GCAGAGCAGAAGAATTGGAGGATGATGATGAGGGAGATAGAAGAGTCAGGATCAGCTGTC TCCATTCTGAAGACTCAGCGAAGCAAGAAAGAACCACTGCCAAGGGATGCTGTTCTTGGA ACTCTTATGCGGTTCAAACAGCTCAAGAAATGGAACCTGGTCAGCGAGATTCTTGAATGG CTACGCACACAACATTGGTGGAACTTCAGTGAGATGGACTTTTTGATGCTTGTTACGGCC TATGGAAAATTAGGAGATTTTAGCAGAGCGGAGAGGGTCCTGAAGTATATGAACAAGAAA GGTTACAAACCAAGCGTGATATCTCAGACTGCACTGATGGAAGCATATGGAAGAGCCAAG CAGTATCGTAAGGCTGAAGCAGTGTTTCGCAGGATGCAAACATCAGGCCCTGAGCCATCA GCTGTGACATATCAAATCATTTTGAAATCTTTTGTTGAGGGTGACAAATACAAGGAAGCT GAAGCTATTTTTGAGGACCTTCTTAATGAGAAAAGAGCTTCTTTTAAGCCTGACCAGAAG ATGTTTCATATGATGATTTATATGTACAAGAAAGCTGGCGACTATGCCCAGGCTCGGAAA CTATTTGCTCAGATGTCAGAGAGAGGAATCCCTCTATCAACAGTCACCTTTAATAGTTTG ATGTCATTTGAAACAAATTACAAGGAAGTTTCAAGTATTTATGATCAGATGCAAAGAACT GCGCTAAAACCAGATGTTGTGAGCTACTCCCTGCTCATCAAAGCTTATGGAAAAGCTAGA AGGGAAGAAGAAGCATTAGCAGTTTTTGAAGAGATGCTTGATGCAGGAGTCAGGCCAACA CGCAAGTCGTATAACATTTTGATTGATGCATTTGCAATATCTGGATTGGTAGAAGAAGCT CATACAGTTTTCAAGGCCATGAGAAGACACAGGGTTGAGCCTGATCTCTGTTCTTACACA ACAATGGTCTTAGCTTATGTGAATGCTTCTGACATGGATGGGGCTGAGAAATTCTTCCGC CGGATTAAAGAGGACGGTTTGAAGCCAAATGTTGTTGTTTATGGAACTTTGATGAAGGGC TACTCGAAATTAAATAATGTTGAGAGAGTAATGAGAGTGTACGAGAGAATGCGGATGCAG GGTGTTGAACCCAATCAGACTATTTATACTACCATCATGGATGTGCATGGAAGGAACTCT GATTTTGGAAATGCTGTCATCTGGTTCAAAGAAATGGAGGCTCGTGGGTACCCAGCAGAC AAGAAAGCAAAGAATATCCTTCTTTCTCTTGCCAAAACTCCTGAAGAACAAGAAGAAGCG AATGAATTGACAGGGAATTGTGCAATTCAGCTGGAAGCAAAACCCGATGGAACAACATAT GGTTTAGAAATAAATGGTACTGGAAATGAGTATAAACATGGACAAAATGATGCTGGGCAT GACAGTTTGTTAGATGGCGCATGCACCACAAGTAATCGAAATGGTAAAGTCGAGGCTGGG AAAGGTCATTTTGAGGAGGTTAATGACGATGATGATGATGATGATGACGATGATTACGAT GAAGAGTTAAATTTTGTTTCTTTCAAAGATAAGCGAGAACTAAATTTTGCCACTTGATGT TTTGATTAATGTATATCTTTATATTCCAAACTTGTGATGGCATTTCCTATACAAAGGTAT CCATGCTGTTTGTGAAATGTCAAATATAGCTATTTTTATG