Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0178900-00
CDS Infomation	cds chromosome:IRGSP-1.0:8:4617579:4620400:-1 gene:Os08g0178900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Homeodomain-like domain containing protein. (Os08t0178900-00)
Sequence	AAGCGACGGGAGCTGCGTCCTCTCGCGAGGCGACGGCGACGACCCGTGCTCCGAGGCGGA AGAGGCAAGCTCAGCACCGTTGTACGAGCTCGTCGTCCCGAGGCGACGGCGCGGCAGGAT CCCGCGCGGAGAGCGCGAGCGCGGGAAATTTCCCCGCAAAATCCAGGTAGGAAGAAGAAG GGAGGCACACCTGAGGCCTCAGATGCGGCGGCGGCAGCCCCAGCCCGTACCCTAGGTTGT GGTGTTGGGTCGGCGACGGCGGCTCTCCCCTTCAGTCGTGGCGGCCGCGGTGTCGGGTTA GCACCGCCGCCCCGCTCTCTCGGCCGTGGTGGCGGGCCAGCAGTGGCAGCAATCCCTCCA GGCGGCTTCCCCAGTTATTCAGCGTCCATGGATGGATTTCCCTTCCCTCCACCTTTTGAT GGATCCTACAGAGGTGGATTCCCCAGCTCTTCAGCTTGGTTGGATGCGTCCGGTGGTGAT GAATCTTCTCCTGGATCATGTGATAAAGATGTACATCCACGTGGTGGTTTCATGAGCTAT TTTGGAAATCATGCACAAAACTCTCATTTGGTTGGTGCGCCTATTTACATTGCTGATGCT AGTTCACCACCAGAGGTGGAAATTTTACAAGGCAATGATGATGGAAATGGCAATGGCAAT GTTAGGACTGAGAAGAGGATACTGTGGACAGAGGAAGAGGATATCAGATTGATGAGTGCT TGGATAGAGCATTCAACTGACTCTACATGTGGAGCAGATAAGGGAGGTGGCCAATATTGG GGTGAAGTTGTTGAATCGTACAACAAGACTACCCCACCTCTCAGAAAAAGAAATCTGAAG CAATGCAAGGATAGATGGCACAAGATTAATAGGTGGACGGATCTCTTTGAGTGTGCTTAT GTAAAGGCTCGTAGAATTTTTACAAGTGGATATTCTAATCAAATGTGGATTGATGCAGCA CACAAATTTTATGTGGATGACAATAAAGAGGCAAAGCTAGGACCCTTTGTGCTAATGGAG GTTTGGAAAATATGCCGAGAAGTCTCAAAGTGGAAAACATACAATGAAAACATGAGGAAT GCACGTAAAAGGAAATCATTTCACTTGGAAGGAGACTCTGAGGAAGCTGATGACACTTTT GATGAGATGCCAAAGCGACCAATGGGTCAGAAGGCCGCTAAAAAGGCAGCTCTAGATGCA AAAATCAAGTCAAATGGTTTGGGCAGTAGTGATGATGGTCACTCAAAGGAGTCTCCTATT CAGTTAGACAAATTTGATAGATATAGCAAATTCCAGGAGGAAAACAATGACAAGCGCATG AAACTATTGGACAGACAGGAAAAAATATCTTCTGAGAAGCTAGAGGCCACAAAAATTGCC CACCTTACAGCACAAGAGTACAAAGAAGGAAGGAAGCTTGAGAAAGAGTCAAAGATGATG GAGACTTATAACAGCCTCATCTCACAAGATACAAGTTCAATGTCTGCTGAGGAAAAGGCG CAGCGAGTTAGTATGATGAAGTGTCTTATGAAAACTCTTTTCCCTGAATCTGATTGA

Peptide Sequence

PEP ID	Os08t0178900-00
PEP Infomation	pep chromosome:IRGSP-1.0:8:4617579:4620400:-1 gene:Os08g0178900 transcript:Os08t0178900-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Homeodomain-like domain containing protein. (Os08t0178900-00)
Sequence	KRRELRPLARRRRRPVLRGGRGKLSTVVRARRPEATARQDPARRARAREISPQNPGRKKK GGTPEASDAAAAAPARTLGCGVGSATAALPFSRGGRGVGLAPPPRSLGRGGGPAVAAIPP GGFPSYSASMDGFPFPPPFDGSYRGGFPSSSAWLDASGGDESSPGSCDKDVHPRGGFMSY FGNHAQNSHLVGAPIYIADASSPPEVEILQGNDDGNGNGNVRTEKRILWTEEEDIRLMSA WIEHSTDSTCGADKGGGQYWGEVVESYNKTTPPLRKRNLKQCKDRWHKINRWTDLFECAY VKARRIFTSGYSNQMWIDAAHKFYVDDNKEAKLGPFVLMEVWKICREVSKWKTYNENMRN ARKRKSFHLEGDSEEADDTFDEMPKRPMGQKAAKKAALDAKIKSNGLGSSDDGHSKESPI QLDKFDRYSKFQEENNDKRMKLLDRQEKISSEKLEATKIAHLTAQEYKEGRKLEKESKMM ETYNSLISQDTSSMSAEEKAQRVSMMKCLMKTLFPESD

Transcript Sequence

Transcript ID	Os08t0178900-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:4617579:4620400:-1 gene:Os08g0178900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Homeodomain-like domain containing protein. (Os08t0178900-00)
Sequence	AAGCGACGGGAGCTGCGTCCTCTCGCGAGGCGACGGCGACGACCCGTGCTCCGAGGCGGA AGAGGCAAGCTCAGCACCGTTGTACGAGCTCGTCGTCCCGAGGCGACGGCGCGGCAGGAT CCCGCGCGGAGAGCGCGAGCGCGGGAAATTTCCCCGCAAAATCCAGGTAGGAAGAAGAAG GGAGGCACACCTGAGGCCTCAGATGCGGCGGCGGCAGCCCCAGCCCGTACCCTAGGTTGT GGTGTTGGGTCGGCGACGGCGGCTCTCCCCTTCAGTCGTGGCGGCCGCGGTGTCGGGTTA GCACCGCCGCCCCGCTCTCTCGGCCGTGGTGGCGGGCCAGCAGTGGCAGCAATCCCTCCA GGCGGCTTCCCCAGTTATTCAGCGTCCATGGATGGATTTCCCTTCCCTCCACCTTTTGAT GGATCCTACAGAGGTGGATTCCCCAGCTCTTCAGCTTGGTTGGATGCGTCCGGTGGTGAT GAATCTTCTCCTGGATCATGTGATAAAGATGTACATCCACGTGGTGGTTTCATGAGCTAT TTTGGAAATCATGCACAAAACTCTCATTTGGTTGGTGCGCCTATTTACATTGCTGATGCT AGTTCACCACCAGAGGTGGAAATTTTACAAGGCAATGATGATGGAAATGGCAATGGCAAT GTTAGGACTGAGAAGAGGATACTGTGGACAGAGGAAGAGGATATCAGATTGATGAGTGCT TGGATAGAGCATTCAACTGACTCTACATGTGGAGCAGATAAGGGAGGTGGCCAATATTGG GGTGAAGTTGTTGAATCGTACAACAAGACTACCCCACCTCTCAGAAAAAGAAATCTGAAG CAATGCAAGGATAGATGGCACAAGATTAATAGGTGGACGGATCTCTTTGAGTGTGCTTAT GTAAAGGCTCGTAGAATTTTTACAAGTGGATATTCTAATCAAATGTGGATTGATGCAGCA CACAAATTTTATGTGGATGACAATAAAGAGGCAAAGCTAGGACCCTTTGTGCTAATGGAG GTTTGGAAAATATGCCGAGAAGTCTCAAAGTGGAAAACATACAATGAAAACATGAGGAAT GCACGTAAAAGGAAATCATTTCACTTGGAAGGAGACTCTGAGGAAGCTGATGACACTTTT GATGAGATGCCAAAGCGACCAATGGGTCAGAAGGCCGCTAAAAAGGCAGCTCTAGATGCA AAAATCAAGTCAAATGGTTTGGGCAGTAGTGATGATGGTCACTCAAAGGAGTCTCCTATT CAGTTAGACAAATTTGATAGATATAGCAAATTCCAGGAGGAAAACAATGACAAGCGCATG AAACTATTGGACAGACAGGAAAAAATATCTTCTGAGAAGCTAGAGGCCACAAAAATTGCC CACCTTACAGCACAAGAGTACAAAGAAGGAAGGAAGCTTGAGAAAGAGTCAAAGATGATG GAGACTTATAACAGCCTCATCTCACAAGATACAAGTTCAATGTCTGCTGAGGAAAAGGCG CAGCGAGTTAGTATGATGAAGTGTCTTATGAAAACTCTTTTCCCTGAATCTGATTGAACA GATATGTCAATTTTGCAAGTGGAGGCTACTATCTTTGGCTATCTGGTGAATGCCAAATTA TCTTGCTGTTTTTTCTATCCTAAACCAACTTTTCCACTTTTTCTATCCTAAACTCTGGCT ATTGGCAAGTTATGTTTAATCTTTCAGCAGGTTCAGTGTATGTCTCAGTTTATATAATTT TTGTTCATGCTCAATCCACTAAGCCTATTTTGGTGCTTGTTCAGTGATACACTATACTAC TAATATGGAGTATATATAATCTAGGGAAAAAGATGGGCATATTAGCCTTTTATTGC