Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0178300-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:4586478:4591215:1 gene:Os08g0178300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF2050, pre-mRNA-splicing factor domain containing protein. (Os08t0178300-01);Hypothetical conserved gene. (Os08t0178300-02)
Sequence	ATGGCGACGAAGCAGCAGGACGCTTCGACGTCCGGCGCGGCCATGTCCATGAAGGAGTAC CTCAAGAGGTACCAATCCGACGACGCGCAGGGCAAGGCCAAGAAGAAGAAGAAGAAGAAG CCCAAGCCCGCGGCCGCCGTGGGCGGAGGTGTGCTTATCGTCGACGAGGACCCCACGTGG CACAAGCCCGTCCAGATCGAGGAGGAGCCCGCGTCGTCCGGGGATGAGAGACCGTTGGTG GACGAGGACATCGAGGTCAAGCGGATGCGCCGCCTGGAGGCGATTCGCGCGGCGCGGCCG TACAATGCTATCGCTGAGGACGGAAGCGGGTGGGTCACCGTGGCCGCCCCCGAGGACTCC GATGGTGGTTTAACCGGTCGCCGCCGCAGAAATGACACGCCCTCACCGGAGCGCGGGGGT GCTGGAAGGAAGGATCTGTCTCCTCCGCGGCGGAGGCAGCGGCAGGATACGCCCTCGCCG GACCCGAGAGATGCTGCGGGTAAGGATCTGTCGCCGCCGAGGCAGAGGCGAAGGCGGCAA GACACGCCGTCACCAAAGGGTAGTGAGGTAGCTGGGGGGCATGATGATTTGTCACCACCG CGGAAGTCTAGGCAGCAACGAGACCCCTCTCCTCCACGCAGGCTCTCTCGCCATGACTCC AAGGAATCCCAGGACATTTCACCACCACGAAGGCGTACCAGGCATGACTCAGAGGAGCCA CAGGACCTCTCTCCACCACGCCGGAAGGGGCGGCATGATTCTGAAGAACCCAAAGACCTC TTGCCACCATGGAGGCGCGTGAGGCATGATTCTGAGGAACCCAAAGACCTCTCGCCACCA CGGAGGCGCACGAGACATGATTCAGAAGAGCCCGAAGACCTCTCTCCCCCACGCAGACGG ACGCGGCACGACTCTCATGAACCCAAGGACAAATTGCCACCACTGAAAAGGCAGGCTTTG GGTGATGGGGACATTTCACCTCCAAGGAAGGGTAGGAAGGAAGTGGCTCCGAAGGAGGTG AGGAAAGCTGGGTTGATGACAGCAGAGGAAGTTAAAGAGGACATCAGGAAGATTAAGGAG GATGAGAGGCTCAAGTTTGCTGCACAGGATCCCTCAGTGATTGGGAAAGGGGCAAAAGCA GTATTCCGAGATAAACAAGGAAAACGAATAAGTGAAGAAGATATGAGGAAGGCAAAGGAA GACACGAAACCAAAGGAAATACATATAGAATGGGGTAAAGGGTTGGTGCAGAAGCGAGAA GCTGAGGCTAGATTACAGGAGCTTGAATCTGAAAAGAGTAAGCCATTTGCACGGACAAGG GATGATCCTGAGCTCGACACCATGCTAAAAAACAGAATCCGGTGGGGTGATCCTATGGCT CATCTTGTCAAGAGGAATGATACAGACCTCCTTCTGGAGGACTTGGGAGATGATGAAAAG ATGAAAGAATCTGGCTTCATTGTTCCCCAAAATATACCTAGTCACAGCTGGCTGAAGCGT GGTGTAGATCCTCCTCCAAACCGCTACGGCATAAAGCCTGGTCGTCATTGGGACGGAGTG GATCGCAGCAATGGATTTGAGAAGGATATGTTTAAGCTGAAGAACGAGAAGCAAGCAACG GAGCAAGAGGCCTACCTTTGGTCTGTCGCAGATATGTGA

Peptide Sequence

PEP ID	Os08t0178300-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:4586478:4591215:1 gene:Os08g0178300 transcript:Os08t0178300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF2050, pre-mRNA-splicing factor domain containing protein. (Os08t0178300-01);Hypothetical conserved gene. (Os08t0178300-02)
Sequence	MATKQQDASTSGAAMSMKEYLKRYQSDDAQGKAKKKKKKKPKPAAAVGGGVLIVDEDPTW HKPVQIEEEPASSGDERPLVDEDIEVKRMRRLEAIRAARPYNAIAEDGSGWVTVAAPEDS DGGLTGRRRRNDTPSPERGGAGRKDLSPPRRRQRQDTPSPDPRDAAGKDLSPPRQRRRRQ DTPSPKGSEVAGGHDDLSPPRKSRQQRDPSPPRRLSRHDSKESQDISPPRRRTRHDSEEP QDLSPPRRKGRHDSEEPKDLLPPWRRVRHDSEEPKDLSPPRRRTRHDSEEPEDLSPPRRR TRHDSHEPKDKLPPLKRQALGDGDISPPRKGRKEVAPKEVRKAGLMTAEEVKEDIRKIKE DERLKFAAQDPSVIGKGAKAVFRDKQGKRISEEDMRKAKEDTKPKEIHIEWGKGLVQKRE AEARLQELESEKSKPFARTRDDPELDTMLKNRIRWGDPMAHLVKRNDTDLLLEDLGDDEK MKESGFIVPQNIPSHSWLKRGVDPPPNRYGIKPGRHWDGVDRSNGFEKDMFKLKNEKQAT EQEAYLWSVADM

Transcript Sequence

Transcript ID	Os08t0178300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:4586478:4591215:1 gene:Os08g0178300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF2050, pre-mRNA-splicing factor domain containing protein. (Os08t0178300-01);Hypothetical conserved gene. (Os08t0178300-02)
Sequence	AGTCCAGCAATTCCACTCCCCCACCACCGCCATCCTCCCCCCCGCCGCCTCCACCCGCCG GCGTCCACCTCCATCTCCTCCTCCATCACCGCCACCGCCGCCATCCATACGGGCTCTCCC GCTCGGCTCGGCTACTCCACCACCGGCAACGCTCCCCGTGCCGCATCCATCCCCCCCCCT CCAAGCTTCCAGTCGCAGGAGAGAAGGCGGCCGCCGGAGTAGGCACACGCAACAAGCAGC TTCCAGTAGGTTTCCCTCACCGGCGGCGGCGGCGGCGGAGGCGGCGAGAAGCCGGCCATG GCGACGAAGCAGCAGGACGCTTCGACGTCCGGCGCGGCCATGTCCATGAAGGAGTACCTC AAGAGGTACCAATCCGACGACGCGCAGGGCAAGGCCAAGAAGAAGAAGAAGAAGAAGCCC AAGCCCGCGGCCGCCGTGGGCGGAGGTGTGCTTATCGTCGACGAGGACCCCACGTGGCAC AAGCCCGTCCAGATCGAGGAGGAGCCCGCGTCGTCCGGGGATGAGAGACCGTTGGTGGAC GAGGACATCGAGGTCAAGCGGATGCGCCGCCTGGAGGCGATTCGCGCGGCGCGGCCGTAC AATGCTATCGCTGAGGACGGAAGCGGGTGGGTCACCGTGGCCGCCCCCGAGGACTCCGAT GGTGGTTTAACCGGTCGCCGCCGCAGAAATGACACGCCCTCACCGGAGCGCGGGGGTGCT GGAAGGAAGGATCTGTCTCCTCCGCGGCGGAGGCAGCGGCAGGATACGCCCTCGCCGGAC CCGAGAGATGCTGCGGGTAAGGATCTGTCGCCGCCGAGGCAGAGGCGAAGGCGGCAAGAC ACGCCGTCACCAAAGGGTAGTGAGGTAGCTGGGGGGCATGATGATTTGTCACCACCGCGG AAGTCTAGGCAGCAACGAGACCCCTCTCCTCCACGCAGGCTCTCTCGCCATGACTCCAAG GAATCCCAGGACATTTCACCACCACGAAGGCGTACCAGGCATGACTCAGAGGAGCCACAG GACCTCTCTCCACCACGCCGGAAGGGGCGGCATGATTCTGAAGAACCCAAAGACCTCTTG CCACCATGGAGGCGCGTGAGGCATGATTCTGAGGAACCCAAAGACCTCTCGCCACCACGG AGGCGCACGAGACATGATTCAGAAGAGCCCGAAGACCTCTCTCCCCCACGCAGACGGACG CGGCACGACTCTCATGAACCCAAGGACAAATTGCCACCACTGAAAAGGCAGGCTTTGGGT GATGGGGACATTTCACCTCCAAGGAAGGGTAGGAAGGAAGTGGCTCCGAAGGAGGTGAGG AAAGCTGGGTTGATGACAGCAGAGGAAGTTAAAGAGGACATCAGGAAGATTAAGGAGGAT GAGAGGCTCAAGTTTGCTGCACAGGATCCCTCAGTGATTGGGAAAGGGGCAAAAGCAGTA TTCCGAGATAAACAAGGAAAACGAATAAGTGAAGAAGATATGAGGAAGGCAAAGGAAGAC ACGAAACCAAAGGAAATACATATAGAATGGGGTAAAGGGTTGGTGCAGAAGCGAGAAGCT GAGGCTAGATTACAGGAGCTTGAATCTGAAAAGAGTAAGCCATTTGCACGGACAAGGGAT GATCCTGAGCTCGACACCATGCTAAAAAACAGAATCCGGTGGGGTGATCCTATGGCTCAT CTTGTCAAGAGGAATGATACAGACCTCCTTCTGGAGGACTTGGGAGATGATGAAAAGATG AAAGAATCTGGCTTCATTGTTCCCCAAAATATACCTAGTCACAGCTGGCTGAAGCGTGGT GTAGATCCTCCTCCAAACCGCTACGGCATAAAGCCTGGTCGTCATTGGGACGGAGTGGAT CGCAGCAATGGATTTGAGAAGGATATGTTTAAGCTGAAGAACGAGAAGCAAGCAACGGAG CAAGAGGCCTACCTTTGGTCTGTCGCAGATATGTGAGCATAGCTGTTCTTCAAAGAAGCC AAGGTAGCTTGTGTGCCTTGTTAAACGAAGTAGTATACTGTAAAATGCTTGGAAGGAAGG AAGCACGGCCTCTCGGCGTAGCACAGCGTGCTTGAAAACTCAAATGTAGAATCAAACTTG TTGTGCATTGGTTGAAATCTTTTTGGCATTTTTCTCTTTGCCACTCTTAAAAACATTTTG TAACATCGATGAACATCTTTACTCGGAATTAGAAGCTGATCTTTT