Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0178200-02
CDS Infomation

cds chromosome:IRGSP-1.0:8:4581432:4583489:1 gene:Os08g0178200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:monosaccharide transporter 5 description:Similar to Monosaccharide transporter 3. (Os08t0178200-02)
Sequence

ATGGCGGGCGGCGCGATGGTCCAGACGGTGGGTGGCAAGACGTACCCGGGGAAGATGACC
GCGTTCGTGTTCTTCACCTGCCTCGTCGCCTCCTCCGGCGGCCTCATCTTCGGCTACGAC
ATCGGCATCTCCGGCGGCGTCACCTCCATGGACTCCTTCCTCAGCGAGTTCTTCCCGTCG
GTGTACGCGCAGGCGAAGGCGAGCAAGGACACCAACCAGTACTGCAAGTTCGACAGCCAG
CTGCTGACGCTCTTCACCTCGTCGCTGTACCTGGCGGCGCTGGCGACGTCGTTCGTGGCG
GCGTGGGTCACCCGGGTGTTCGGCCGGAAGTGGTCCATGTTCTGCGGCGGCGTCACCTTC
CTCGCCGGCTCGGCGCTCAACGGCGCCGCCACCGACGTCATGATGCTCATCCTCGGCCGC
ATCCTCCTCGGCATCGGCGTCGGCTTCGCCAACCAGTCCGTGCCGCTCTACCTGTCGGAG
ATGGCGCCGGCGAACCTCCGCGGGATGCTCAACATCGGCTTCCAGCTCATGACCACCATC
GGCATCCTCTCCGCCAACCTCATCAACTACGCGACGTCGAGCATCGAGGGCGGGTGGGGG
TGGCGCATCGGCCTCGGCCTCGCCGGCGTGCCCGCGCTCATCATCACGCTCGGCGCGCTC
GTCCTCCCGGACACCCCAAACTCCCTCATCGCCCGCGGCTACGCCGGCGACGCCAAGCGC
GTCCTCGTCAAGATCCGCGGCACGGACGACGTCCACGACGAGTACGACGACATGGTAGCG
GCAAGCGAAGAAGCCGCCTCGATCGAGCACCCATGGCGGAACATCCTCCATCGCAAGTAC
CGCCCGCAGCTCACCATCGCCATCCTCATCCCGTGCTTCCAACAGCTCACCGGCATCAAC
GTGATCATGTTCTACGCGCCGGTGCTCTTCCTCACCATCGGCTTCGCCGGCGACGCGTCG
CTCATGTCCGCCGTGATCACGGGCCTCGTCAACATGTTCGCCACCGTCGTCTCGATCATC
TCCGTGGACCGCCTCGGCCGCCGCGTGCTGTTCCTCCAGGGCGGCACGCAGATGTTCATC
TCCCAGGTGGTGGTCGGGACGCTGATCGCGCTCCAGTTCGGCGTCGCGGGCGTCGGCGAG
ATGTCGCGGTCGTACGCCATCTTGCTCGTGCTGTTCATCTGCATGTACGTGGCCGGGTTC
GCGTGGTCGTGGGGGCCCCTGGGGTGGCTGGTGCCGAGCGAGGTGTTCGCGCTGGAGATC
AGGTCGGCGGGGCAGAGCATCGCGGTGTGCGTCAACATGATGCTGACGTTCGTCATCGGG
CAGGCGTTCCTCACCATGCTGTGCCACCTCAAGTTCGGCCTCTTCTACTTCTTCGCCGGG
TGGATGCTGGTCATGACCACCTTCGTCGCGCTCTTCCTGCCGGAGACGAAGGGGGTGCCC
ATCGAGGAGATGAACCACGTCTGGAGCCGGCACTGGTTCTGGGGCAGCTACGTCACCGCC
CACGACGTCGCCGGCGCCGGCGCCGGAGGAGGAGGAAACCGCAGAAGCCACAACGTCTAG

Peptide Sequence

PEP ID

Os08t0178200-02
PEP Infomation

pep chromosome:IRGSP-1.0:8:4581432:4583489:1 gene:Os08g0178200 transcript:Os08t0178200-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:monosaccharide transporter 5 description:Similar to Monosaccharide transporter 3. (Os08t0178200-02)
Sequence

MAGGAMVQTVGGKTYPGKMTAFVFFTCLVASSGGLIFGYDIGISGGVTSMDSFLSEFFPS
VYAQAKASKDTNQYCKFDSQLLTLFTSSLYLAALATSFVAAWVTRVFGRKWSMFCGGVTF
LAGSALNGAATDVMMLILGRILLGIGVGFANQSVPLYLSEMAPANLRGMLNIGFQLMTTI
GILSANLINYATSSIEGGWGWRIGLGLAGVPALIITLGALVLPDTPNSLIARGYAGDAKR
VLVKIRGTDDVHDEYDDMVAASEEAASIEHPWRNILHRKYRPQLTIAILIPCFQQLTGIN
VIMFYAPVLFLTIGFAGDASLMSAVITGLVNMFATVVSIISVDRLGRRVLFLQGGTQMFI
SQVVVGTLIALQFGVAGVGEMSRSYAILLVLFICMYVAGFAWSWGPLGWLVPSEVFALEI
RSAGQSIAVCVNMMLTFVIGQAFLTMLCHLKFGLFYFFAGWMLVMTTFVALFLPETKGVP
IEEMNHVWSRHWFWGSYVTAHDVAGAGAGGGGNRRSHNV

Transcript Sequence

Transcript ID

Os08t0178200-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:4581432:4583489:1 gene:Os08g0178200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:monosaccharide transporter 5 description:Similar to Monosaccharide transporter 3. (Os08t0178200-02)
Sequence

ACTCTTCCTCCTCCTCCCTCCTCGCCGGAGCTTGGCTGAGCTTGAGCTGAGCTGAGCTGA
TCGGCGGCGGCAATGGCGGGCGGCGCGATGGTCCAGACGGTGGGTGGCAAGACGTACCCG
GGGAAGATGACCGCGTTCGTGTTCTTCACCTGCCTCGTCGCCTCCTCCGGCGGCCTCATC
TTCGGCTACGACATCGGCATCTCCGGCGGCGTCACCTCCATGGACTCCTTCCTCAGCGAG
TTCTTCCCGTCGGTGTACGCGCAGGCGAAGGCGAGCAAGGACACCAACCAGTACTGCAAG
TTCGACAGCCAGCTGCTGACGCTCTTCACCTCGTCGCTGTACCTGGCGGCGCTGGCGACG
TCGTTCGTGGCGGCGTGGGTCACCCGGGTGTTCGGCCGGAAGTGGTCCATGTTCTGCGGC
GGCGTCACCTTCCTCGCCGGCTCGGCGCTCAACGGCGCCGCCACCGACGTCATGATGCTC
ATCCTCGGCCGCATCCTCCTCGGCATCGGCGTCGGCTTCGCCAACCAGTCCGTGCCGCTC
TACCTGTCGGAGATGGCGCCGGCGAACCTCCGCGGGATGCTCAACATCGGCTTCCAGCTC
ATGACCACCATCGGCATCCTCTCCGCCAACCTCATCAACTACGCGACGTCGAGCATCGAG
GGCGGGTGGGGGTGGCGCATCGGCCTCGGCCTCGCCGGCGTGCCCGCGCTCATCATCACG
CTCGGCGCGCTCGTCCTCCCGGACACCCCAAACTCCCTCATCGCCCGCGGCTACGCCGGC
GACGCCAAGCGCGTCCTCGTCAAGATCCGCGGCACGGACGACGTCCACGACGAGTACGAC
GACATGGTAGCGGCAAGCGAAGAAGCCGCCTCGATCGAGCACCCATGGCGGAACATCCTC
CATCGCAAGTACCGCCCGCAGCTCACCATCGCCATCCTCATCCCGTGCTTCCAACAGCTC
ACCGGCATCAACGTGATCATGTTCTACGCGCCGGTGCTCTTCCTCACCATCGGCTTCGCC
GGCGACGCGTCGCTCATGTCCGCCGTGATCACGGGCCTCGTCAACATGTTCGCCACCGTC
GTCTCGATCATCTCCGTGGACCGCCTCGGCCGCCGCGTGCTGTTCCTCCAGGGCGGCACG
CAGATGTTCATCTCCCAGGTGGTGGTCGGGACGCTGATCGCGCTCCAGTTCGGCGTCGCG
GGCGTCGGCGAGATGTCGCGGTCGTACGCCATCTTGCTCGTGCTGTTCATCTGCATGTAC
GTGGCCGGGTTCGCGTGGTCGTGGGGGCCCCTGGGGTGGCTGGTGCCGAGCGAGGTGTTC
GCGCTGGAGATCAGGTCGGCGGGGCAGAGCATCGCGGTGTGCGTCAACATGATGCTGACG
TTCGTCATCGGGCAGGCGTTCCTCACCATGCTGTGCCACCTCAAGTTCGGCCTCTTCTAC
TTCTTCGCCGGGTGGATGCTGGTCATGACCACCTTCGTCGCGCTCTTCCTGCCGGAGACG
AAGGGGGTGCCCATCGAGGAGATGAACCACGTCTGGAGCCGGCACTGGTTCTGGGGCAGC
TACGTCACCGCCCACGACGTCGCCGGCGCCGGCGCCGGAGGAGGAGGAAACCGCAGAAGC
CACAACGTCTAGCTCTTACATATACTATTACCGTTTACGAGTTACGCGAGAGAGAGAGAA
TTAATGGGTAGGTTGTGTAATTAGGTAATGCAAGAATTAATTAAACCAATTAATTTCAAG
GGACAGGTTTTTAATTAATTAATTAATTCGGGGAGGGGGGAGCTTTAGAATTTGGTCGGG
GCAGGTTAATTTCAGGGTATTTGTTGTATAGATTTTGAATTTTATAGGTGTTTTCTTTTT
ATGAAATTCTTATGTAGTAAATTCTTTGGAGAGCGCTACAAATATCGCATGGTGTTGCCG
CGCATGTAGAGTACTGTTTCTCTAACCAATAAAAAATGTTTCAACAAAAATGTATCAGTT
ATGTGTATCTTGAAAATAAAAAATGTTTCGTTACTCTTGAGAAATGTTTCATCGATCGGG
TTAAACAGTTTTAACTAT