Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0177500-00
CDS Infomation	cds chromosome:IRGSP-1.0:8:4546935:4549380:1 gene:Os08g0177500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os08t0177500-00)
Sequence	ATGGATGGGAGCAAGTACAGGGCGAAGGGCTCTGCCATGGTCGGTGCCAGCAAGAAGGTT GCCTATGTCCTTCTGCTGCTGCTGGCGCTGGCCGCCGCCGCGCTCAGCGTCGTCGTCCTG CACAAGGTCAGGGAGCGCCGCGCGTTTGCTGTTCTTCTCCGGGAGCGCGACCGGCAGCTC ATCTCCACGCGGATCCTCCTCCAGAAAGAGAAGGCGTTTAACAAGGAGATGAAGAGGAAG TTGGAAGAACTGAAGGCCACAACATCTTCCCTAAGGACTCAGAAGACAGACCTGAAAACG AAGATCAAAGGACTAGAAGCCACAGCCACAACTCTGAAGAACAGAGAGAAAGAACTGGAA GCAGTTCTCGCAGAGAAAAATAGCCGCGTCAGTCAAATGGAAGCAACTCTCACAGATAAA AACAGCCACATCAGACAAATGGAAGAGAGAGCCGCAGGCACAAATCCTGACCAGATGGCA GCTCTGATGGAGCTCCTGCAGCAGAAGGAAGCCGAGCTTGAAGAGATCAAGGTCAGGTTC CAGGATTACAAGACAACGGAACGGAAGAGCGTCGGCAGTAAGAGCACTCATGTTCAATCA AACAACGCAAATGCAAGACCTGACAATGCTGTAGTCGAAAAGGTCACAAGCTCCAGTGAT GCTACACCCACTAGAGCAGAAGAAAAGAGTTCTAAGAATACCACAACAGCAGAAAGTAGA CACCCAAAAGACACATCTTTAGAAGAAAAGCAAGTGAAATCTGCAACTAGCAAGGAAGAA GATGGCTTACAAGACAAAACAGATGATGCCATTGAAGATATTGATGATATCTACGGGGAA AGTCATTCAAAGAAGATCGAATTTCCTCGGCGGAACAAAAAGTTTTTGACTAACAGTGGA GTAGACAGCCAAGATGAAGAACTGCATAGGATAGAACACCCAGGGAACTCCCTAGACCAG GACAGTGATCGCGTCAGGTACAATAAACTGTTGGAGAAGGAAATTGATAAAGTTTCTGGT GAAACCAAGAATAAAAAGAGTATTGATGGTAGTTTGGAAAAGATATCCAAGCATAGCTTA GGTGATGCCAATAAAAACGGATTGAAACAAACTGTGGAAGACATGGCTGGTGGTACTGCT GCTGTGAAGCCCAATATGTCTGTAAATGATGATGGAACTCAACAACAGAATAAGAGACCC AAGAAGAAGAAGACCAGATCCAAGAAGAAGATGATCGATTCTGCAACTACTAATAGTAGT AGTGAAGTTACAAAAGAAAAGTAA

Peptide Sequence

PEP ID	Os08t0177500-00
PEP Infomation	pep chromosome:IRGSP-1.0:8:4546935:4549380:1 gene:Os08g0177500 transcript:Os08t0177500-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os08t0177500-00)
Sequence	MDGSKYRAKGSAMVGASKKVAYVLLLLLALAAAALSVVVLHKVRERRAFAVLLRERDRQL ISTRILLQKEKAFNKEMKRKLEELKATTSSLRTQKTDLKTKIKGLEATATTLKNREKELE AVLAEKNSRVSQMEATLTDKNSHIRQMEERAAGTNPDQMAALMELLQQKEAELEEIKVRF QDYKTTERKSVGSKSTHVQSNNANARPDNAVVEKVTSSSDATPTRAEEKSSKNTTTAESR HPKDTSLEEKQVKSATSKEEDGLQDKTDDAIEDIDDIYGESHSKKIEFPRRNKKFLTNSG VDSQDEELHRIEHPGNSLDQDSDRVRYNKLLEKEIDKVSGETKNKKSIDGSLEKISKHSL GDANKNGLKQTVEDMAGGTAAVKPNMSVNDDGTQQQNKRPKKKKTRSKKKMIDSATTNSS SEVTKEK

Transcript Sequence

Transcript ID	Os08t0177500-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:4546935:4549380:1 gene:Os08g0177500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os08t0177500-00)
Sequence	ATGGATGGGAGCAAGTACAGGGCGAAGGGCTCTGCCATGGTCGGTGCCAGCAAGAAGGTT GCCTATGTCCTTCTGCTGCTGCTGGCGCTGGCCGCCGCCGCGCTCAGCGTCGTCGTCCTG CACAAGGTCAGGGAGCGCCGCGCGTTTGCTGTTCTTCTCCGGGAGCGCGACCGGCAGCTC ATCTCCACGCGGATCCTCCTCCAGAAAGAGAAGGCGTTTAACAAGGAGATGAAGAGGAAG TTGGAAGAACTGAAGGCCACAACATCTTCCCTAAGGACTCAGAAGACAGACCTGAAAACG AAGATCAAAGGACTAGAAGCCACAGCCACAACTCTGAAGAACAGAGAGAAAGAACTGGAA GCAGTTCTCGCAGAGAAAAATAGCCGCGTCAGTCAAATGGAAGCAACTCTCACAGATAAA AACAGCCACATCAGACAAATGGAAGAGAGAGCCGCAGGCACAAATCCTGACCAGATGGCA GCTCTGATGGAGCTCCTGCAGCAGAAGGAAGCCGAGCTTGAAGAGATCAAGGTCAGGTTC CAGGATTACAAGACAACGGAACGGAAGAGCGTCGGCAGTAAGAGCACTCATGTTCAATCA AACAACGCAAATGCAAGACCTGACAATGCTGTAGTCGAAAAGGTCACAAGCTCCAGTGAT GCTACACCCACTAGAGCAGAAGAAAAGAGTTCTAAGAATACCACAACAGCAGAAAGTAGA CACCCAAAAGACACATCTTTAGAAGAAAAGCAAGTGAAATCTGCAACTAGCAAGGAAGAA GATGGCTTACAAGACAAAACAGATGATGCCATTGAAGATATTGATGATATCTACGGGGAA AGTCATTCAAAGAAGATCGAATTTCCTCGGCGGAACAAAAAGTTTTTGACTAACAGTGGA GTAGACAGCCAAGATGAAGAACTGCATAGGATAGAACACCCAGGGAACTCCCTAGACCAG GACAGTGATCGCGTCAGGTACAATAAACTGTTGGAGAAGGAAATTGATAAAGTTTCTGGT GAAACCAAGAATAAAAAGAGTATTGATGGTAGTTTGGAAAAGATATCCAAGCATAGCTTA GGTGATGCCAATAAAAACGGATTGAAACAAACTGTGGAAGACATGGCTGGTGGTACTGCT GCTGTGAAGCCCAATATGTCTGTAAATGATGATGGAACTCAACAACAGAATAAGAGACCC AAGAAGAAGAAGACCAGATCCAAGAAGAAGATGATCGATTCTGCAACTACTAATAGTAGT AGTGAAGTTACAAAAGAAAAGTAA