Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0175600-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:4411430:4417245:-1 gene:Os08g0175600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to PolI-like DNA polymerase. (Os08t0175600-01)
Sequence	ATGGCGGTGGCGCCGCCGCTGCCGCCGGCACCGGCGCGGCTGCTCCGGCGGTGGCAGGGG TCGTCGCCGTGGCTGTCCTCTTCCTTCGGCCGCACCCGCTACTTTTCGCGCCCGGCCTTC GCCGCGGGAGGAAGGCAAGATTATTCTCCTAGTTCTGGCATGGGGGTTAGCAAAACTGGT GCTTTCAGGCTGGGATTGCATGGCAACTTAAATGTACAAAGTAGCGTGCAAGAATGGGTT GATGAAACCAAGAGGTTATTTTTCCTCAGGACCACCAACAATGTCAGGAACAACATCACT AATGGCACTACTCCTCTGCGGGTTGGAAATCTGCGTCATGATCCCTCAGAAGATATCAGG AGTTCAAACTATCCTTCCTTGTATAATCAAAGAGAAAGAGGGCCATCTAATTCAATTGTA AATAGACATGTCGATACAGATTTGGCTAAGCATCGTGTGATGTATCAGTCAGCACATGCT GTGCCTGCCCCATTCAGTGTTGCTAATAATGATATCAAACCACTGAACCTGCTTGATGGC TCCAAGGAGGAAATTCCTTGGCACGATTCCGTTACGGTGGAATCTTCTCTGCCTAAAGTT TCCAAGTCAGAGACAACTTTGGTGGTTGATAAAGCTATCCCAAACAAAAAGGAGCACAAA CGCATTACAAGGAAAGTGACGCTAAATATCCCGGACAAAGCTTCCTTGTCCACTGAGTCA AAAAATGCACGGAAGTTGCTTGCTACCATCTATGACAAAGTTTTGGTTGTCGACAATGTT GAGTCAGCTAGGAGTGTTGTTAAATTGCTTACTACAAAGTACAAAGGCTTTATTCATGCA TGTGACACGGAGGTGGCAAATATTGATGTCAAAGAAGAGACGCCAGTTGGTCATGGAGAA GTAATATGCTTTAGCATCTATTCAGGAAATTCTGATGGGGAGGCTGATTTTGGAAATGGC AAAACATGCATATGGGTGGATGTGCTAGATGGTGGAAGGGATGTTCTAATGGAGTTTGCT CCTTTCTTTGAGGACCCATCTATCAAAAAGGTTTGGCATAACTATAGTTTTGATAGCCAT GTCATTGAGAACTGTGGAATCAAGGTTGCTGGATTTCATGCTGATACAATGCATCTTGCA CGCCTGTGGGATTCTTCCAGGAGAGCTGATGGTGGATATTCACTTGAAGGACTAACAAAT GATCACAGAATCATGAATGCTGTTCTAAAGGACATACATAAAACTGGGAAGGTGTCAATG AAAACTATTTTTGGTCGGAAAAATGTTAGAAAAAATGGATCTGAAGGGAAAACCATATCT ATCGAGCCAGTCAAAAAGTTACAAAGGGAGGATAGAGAGTTGTGGATTTGCTATTCCTCA CTAGATTCAATGAGTACATTGAAGCTTTATGAAAGCTTGAAAAACAAGCTTGAAGCAAAG GAATGGATTTTCGATGGTTGTCCTAGAGGAACAATGTATGATTTCTACGAAGAGTATTGG CGTCCCTTTGGTGCTCTTCTTGTAAAGATGGAAACAGAGGGAATGTTTGTTGACCGTGCA TACCTTTCGGAGATTGAGAAAACTGCTGTTGTTGAACGAAAATTAGCAGCGGATAAGTTT CGGAAATGGGCATCTAAGCATTGTCCTGATGCCAAGTACATGAATGTGAATAGTGATAAT CAAATTCGCCAACTTTTCTTTGGTGGCATC

Peptide Sequence

PEP ID	Os08t0175600-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:4411430:4417245:-1 gene:Os08g0175600 transcript:Os08t0175600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to PolI-like DNA polymerase. (Os08t0175600-01)
Sequence	MAVAPPLPPAPARLLRRWQGSSPWLSSSFGRTRYFSRPAFAAGGRQDYSPSSGMGVSKTG AFRLGLHGNLNVQSSVQEWVDETKRLFFLRTTNNVRNNITNGTTPLRVGNLRHDPSEDIR SSNYPSLYNQRERGPSNSIVNRHVDTDLAKHRVMYQSAHAVPAPFSVANNDIKPLNLLDG SKEEIPWHDSVTVESSLPKVSKSETTLVVDKAIPNKKEHKRITRKVTLNIPDKASLSTES KNARKLLATIYDKVLVVDNVESARSVVKLLTTKYKGFIHACDTEVANIDVKEETPVGHGE VICFSIYSGNSDGEADFGNGKTCIWVDVLDGGRDVLMEFAPFFEDPSIKKVWHNYSFDSH VIENCGIKVAGFHADTMHLARLWDSSRRADGGYSLEGLTNDHRIMNAVLKDIHKTGKVSM KTIFGRKNVRKNGSEGKTISIEPVKKLQREDRELWICYSSLDSMSTLKLYESLKNKLEAK EWIFDGCPRGTMYDFYEEYWRPFGALLVKMETEGMFVDRAYLSEIEKTAVVERKLAADKF RKWASKHCPDAKYMNVNSDNQIRQLFFGGI

Transcript Sequence

Transcript ID	Os08t0175600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:4411430:4417245:-1 gene:Os08g0175600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to PolI-like DNA polymerase. (Os08t0175600-01)
Sequence	TTTTTGGAAGCCTCGATGCCCGTATCTGCTGGAGCGACGATTTCTCCTCCCATATGCGCT ATATTTCGGATGGAGTACCAAATAGAGGATCTGCTGGGATGCTCTTAAACCCTCGTTCCC CTTGTCTCCCAAACCCTCTCTCTCCTTCCCCTCGCTTCCGCCTCCGGCCGCCGCCGCGAG GCCATCGCCTGCTGCTGCAGCGGCCTACCCTAGCGTCGGTGCAAGACGGCGCCCTGCGGC TTCGGTTGCGGGGTGGGTGGTGGCGTTGCGGGAGGAGGAGGGAGGCGGGCCGGGTCCAAG CTGAGGCGGCTCGTGAGGTCCATGGCGGTGGCGCCGCCGCTGCCGCCGGCACCGGCGCGG CTGCTCCGGCGGTGGCAGGGGTCGTCGCCGTGGCTGTCCTCTTCCTTCGGCCGCACCCGC TACTTTTCGCGCCCGGCCTTCGCCGCGGGAGGAAGGCAAGATTATTCTCCTAGTTCTGGC ATGGGGGTTAGCAAAACTGGTGCTTTCAGGCTGGGATTGCATGGCAACTTAAATGTACAA AGTAGCGTGCAAGAATGGGTTGATGAAACCAAGAGGTTATTTTTCCTCAGGACCACCAAC AATGTCAGGAACAACATCACTAATGGCACTACTCCTCTGCGGGTTGGAAATCTGCGTCAT GATCCCTCAGAAGATATCAGGAGTTCAAACTATCCTTCCTTGTATAATCAAAGAGAAAGA GGGCCATCTAATTCAATTGTAAATAGACATGTCGATACAGATTTGGCTAAGCATCGTGTG ATGTATCAGTCAGCACATGCTGTGCCTGCCCCATTCAGTGTTGCTAATAATGATATCAAA CCACTGAACCTGCTTGATGGCTCCAAGGAGGAAATTCCTTGGCACGATTCCGTTACGGTG GAATCTTCTCTGCCTAAAGTTTCCAAGTCAGAGACAACTTTGGTGGTTGATAAAGCTATC CCAAACAAAAAGGAGCACAAACGCATTACAAGGAAAGTGACGCTAAATATCCCGGACAAA GCTTCCTTGTCCACTGAGTCAAAAAATGCACGGAAGTTGCTTGCTACCATCTATGACAAA GTTTTGGTTGTCGACAATGTTGAGTCAGCTAGGAGTGTTGTTAAATTGCTTACTACAAAG TACAAAGGCTTTATTCATGCATGTGACACGGAGGTGGCAAATATTGATGTCAAAGAAGAG ACGCCAGTTGGTCATGGAGAAGTAATATGCTTTAGCATCTATTCAGGAAATTCTGATGGG GAGGCTGATTTTGGAAATGGCAAAACATGCATATGGGTGGATGTGCTAGATGGTGGAAGG GATGTTCTAATGGAGTTTGCTCCTTTCTTTGAGGACCCATCTATCAAAAAGGTTTGGCAT AACTATAGTTTTGATAGCCATGTCATTGAGAACTGTGGAATCAAGGTTGCTGGATTTCAT GCTGATACAATGCATCTTGCACGCCTGTGGGATTCTTCCAGGAGAGCTGATGGTGGATAT TCACTTGAAGGACTAACAAATGATCACAGAATCATGAATGCTGTTCTAAAGGACATACAT AAAACTGGGAAGGTGTCAATGAAAACTATTTTTGGTCGGAAAAATGTTAGAAAAAATGGA TCTGAAGGGAAAACCATATCTATCGAGCCAGTCAAAAAGTTACAAAGGGAGGATAGAGAG TTGTGGATTTGCTATTCCTCACTAGATTCAATGAGTACATTGAAGCTTTATGAAAGCTTG AAAAACAAGCTTGAAGCAAAGGAATGGATTTTCGATGGTTGTCCTAGAGGAACAATGTAT GATTTCTACGAAGAGTATTGGCGTCCCTTTGGTGCTCTTCTTGTAAAGATGGAAACAGAG GGAATGTTTGTTGACCGTGCATACCTTTCGGAGATTGAGAAAACTGCTGTTGTTGAACGA AAATTAGCAGCGGATAAGTTTCGGAAATGGGCATCTAAGCATTGTCCTGATGCCAAGTAC ATGAATGTGAATAGTGATAATCAAATTCGCCAACTTTTCTTTGGTGGCATC