Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0175300-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:4391050:4400757:-1 gene:Os08g0175300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PolI-like DNA polymerase, plastidal DNA polymerase 1 description:PolI-like DNA polymerase. (Os08t0175300-01);Similar to PolI-like DNA polymerase. (Os08t0175300-02)
Sequence	ATGGCGGTGGCGCCGCCGCTGCCGCCGGCACCGGCGCGGCAGCTACGGCGGTGGAAGGGG TCTTCGCCGCGGCCGCCGCCGTGGCTGTCCTCTCCCTTCCGCCGCACCCGCTACTTGTCG CGCCCGGCCTTCGCCGCGGGAGGAAGGCAAGATTATTCTCCTAGTTCAGGCATGGGGGTT AGCAAAACCGGTGCTTTCAGGCTTGGATTGTATGGCAACTTAAATGTACAAAGTAGTGTG CAAGAATGGGTTGATGAAACCAAGAGGTTATTTTTCCTCAGGACCACAAACAGTGTCAGA AACAACATCACTAATGGCACTACTCCTCTGCGGGTTGGAAATCTGCGTCATGATCCCTCA GAAGATATCAGGAGTTCAAACTATCCTTCCTTGTATAATCAAAGAGAAAGAGGACCATCT AATTCAATTGTAAATAGACATGTCGATACAGATTTGGCTAAGCATCGTGTGATGTATCAG TCAGCACATGCTGTGCCTGCCCCATTCAGTGTTGTTAATAATGATATCAAACCACTGAAC ATGCTTGATGGCTCCAAGGAGGAAATTCCTTGGCACGATTCCGTTACGATGGAATCTTCT CTGCCTAAAGTTTCCAAGTCAGAGAAAACTTTGGTGGTTGATAAAGCTATCCCAGACAAA AAGGAGCACAAACGCATTACAAGGAAGGTGACGCCAAATTTCCCGGACAAAGCTTCCTTG TCCACTGAGTCAAAAAATGCACGGAAGTTGCTTGCTACCATCTATGACAAAGTTTTGGTT GTCGACAATGTTGAGTCAGCTAGGAGTGTTGTTAAATTGCTTACTACAAAGTACAAAGGC TTTATTCATGCATGTGACACGGAGGTGGCAAATATTGATGTCAAAGAAGAGACACCAGTT GGTCACGGAGAAGTAATATGCTTTAGCATCTGTTCAGGAAATTCTGATGGGGAGGCTGAT TTTGGAAATGGTAAAACATGCATATGGGTGGATGTGCTAGATGGTGGAAGGGATGTTCTA ATGGAGTTTGCTCCTTTCTTTGAGGACCCATTTATCAAAAAGGTTTGGCATAACTATAGT TTTGATATCCATGTCATTGAGAACTGTGGAATCAAGGTTGCTGGATTTCATGCTGATACG ATGCATCTTGCACGCCTGTGGGATTCTTCCAGGAGAACTGATGGTGGATATTCACTTGAA GGACTAACAAATGATTACAGAGTCATGGATGCTGTTCTAAAGGACATACCTAAAACTGGG AAGGTGTCAATGAAAACTATCTTTGGCCGGAAAAAGGTTAGAAAAGATGGATCTGAAGGG AAAACCATATCTATCGAGCCAGTCGAAAAGTTACAAAGGGAGGATAGAGAGTTGTGGATT TGCTATTCCTCACTAGATTCAATGAGTACATTGAAGCTTTATGAAAGCTTGAAAAACAAG CTTGAAGCAAAGGAATGGATTTTCGATGATTGTCCTAGAGGAACAATGTATGATTTCTAC GAAGAGTATTGGCGTCCCTTTGGTGCTCTTCTTGTAAAGATGGAAACAGAGGGAGTGCTT GTTGACCGTGCATACCTTTCGGAGATTGAGAAAGCTGCTGTTACTGAACGAGAATTAGCA GCGGATAAGTTTCGGAAATGGGCATCTAAGCATTGTCCTGATGCCAAGTACATGAATGTG AATAGTGATAATCAAATTCGCCAACTTTTCTTTGGTGGCATCGAAAATAGAAATAAGCGT GGTGAAACTTGGCCACAAAGTAAAACTTTTAAAGTGCCAAATGATGAAGGCATAGCTACA GAGGGCAAGAAGACTCCAAAGTCTCGCACAATCAAACTTTTCACTATTGTGGAAGATCTT AAAATTGATATGTTCACCCCGACTGGTTGGCCTTCAGTCAGTGGGGACGTTTTAAGGAGT TTGGCTGGTAAAATACCCACAGATCATATATATAAAATTGATGATGGCCAAGAGTTTGAT GAAGATGGGAGCAGTTTGGAACTTCCTGAGCAGGATATAGAAGACACTTCCCCATATGGA ACTGCATATGAAGCGTTTGGTGGAGGAAAGAAGGGAAGGGAAGCATGTCATGCCATTGCT GCTCTATGTGAAGTCTTTTCTATTGACAAATTGATATCCGGCTTCATTGTTCCATTGCAG GGAGATCGTATATCATGCAAGGAAGGGCGCATTCACTGTTCATTAAATATCAATACTGAA ACAGGACGCTTGTCAGCAAGAACACCAAACTTACAGAATCAACCTGCTCTTGAAAAGGAT AGGTACAAGATTCGCCATGCTTTTGTCGCAGCTCCAGGGAACACTCTTATTGTTGCTGAT TATGGCCAACTGGAACTGAGGATCTTGGCGCATCTTACTAATTGTAAAAGCATGCTGGAA GCTTTCAAGGCTGGTGGTGACTTCCATTCTAGGACAGCCATGAATATGTACCAGCATGTT CGTGATGCTGTTGAAGAAAAGAAAGTTCTGCTTGAATGGCATCCTCAACCAGGTCAAGAC AAACCCCCAGTGCCATTATTGAAGGATGCTTTTGGCGCTGAGAGGAGGAAGGCCAAAATG CTTAATTTCTCCATTGCATATGGGAAGACTGCTGTTGGTCTATCTTGGGATTGGAAGGTT TCTGTTAGGGAAGCAAGGGATACACTCAAACTTTGGTATAGGGATAGAAAGGAAGTTTCA GCTTGGCAAAAGAAGCAGAAAGCCTTTGCGCTTGAAAAGTGCGAAGTCTACACTTTGCTC GGGCGATCACGCCAATTTCCTAATATGACTCATGCGGGTCCTGGTCAAAAGGGTCACGTC GAGCGTGCTGCTATAAATGCACCAGTGCAGGGCAGTGCAGCAGATGTTGCTATGTGTGCA ATGCTTGAGATAGAAAGAAACGCTCGCCTTAAGGAGCTTGGTTGGAGACTCCTATTGCAG GTGCATGATGAAGTAATCTTGGAGGGGCCTACAGAATCTGCCGAGGAAGCCAAGACCATC GTTGTGGAGTGCATGTCCAAGCCTTTCTATGGAACCAACATCCTCAAGGTCGACCTAGCT GTCGACGCCAAGTACGCGAAGAGCTGGTATGCTGCCAAGTAG

Peptide Sequence

PEP ID	Os08t0175300-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:4391050:4400757:-1 gene:Os08g0175300 transcript:Os08t0175300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PolI-like DNA polymerase, plastidal DNA polymerase 1 description:PolI-like DNA polymerase. (Os08t0175300-01);Similar to PolI-like DNA polymerase. (Os08t0175300-02)
Sequence	MAVAPPLPPAPARQLRRWKGSSPRPPPWLSSPFRRTRYLSRPAFAAGGRQDYSPSSGMGV SKTGAFRLGLYGNLNVQSSVQEWVDETKRLFFLRTTNSVRNNITNGTTPLRVGNLRHDPS EDIRSSNYPSLYNQRERGPSNSIVNRHVDTDLAKHRVMYQSAHAVPAPFSVVNNDIKPLN MLDGSKEEIPWHDSVTMESSLPKVSKSEKTLVVDKAIPDKKEHKRITRKVTPNFPDKASL STESKNARKLLATIYDKVLVVDNVESARSVVKLLTTKYKGFIHACDTEVANIDVKEETPV GHGEVICFSICSGNSDGEADFGNGKTCIWVDVLDGGRDVLMEFAPFFEDPFIKKVWHNYS FDIHVIENCGIKVAGFHADTMHLARLWDSSRRTDGGYSLEGLTNDYRVMDAVLKDIPKTG KVSMKTIFGRKKVRKDGSEGKTISIEPVEKLQREDRELWICYSSLDSMSTLKLYESLKNK LEAKEWIFDDCPRGTMYDFYEEYWRPFGALLVKMETEGVLVDRAYLSEIEKAAVTERELA ADKFRKWASKHCPDAKYMNVNSDNQIRQLFFGGIENRNKRGETWPQSKTFKVPNDEGIAT EGKKTPKSRTIKLFTIVEDLKIDMFTPTGWPSVSGDVLRSLAGKIPTDHIYKIDDGQEFD EDGSSLELPEQDIEDTSPYGTAYEAFGGGKKGREACHAIAALCEVFSIDKLISGFIVPLQ GDRISCKEGRIHCSLNINTETGRLSARTPNLQNQPALEKDRYKIRHAFVAAPGNTLIVAD YGQLELRILAHLTNCKSMLEAFKAGGDFHSRTAMNMYQHVRDAVEEKKVLLEWHPQPGQD KPPVPLLKDAFGAERRKAKMLNFSIAYGKTAVGLSWDWKVSVREARDTLKLWYRDRKEVS AWQKKQKAFALEKCEVYTLLGRSRQFPNMTHAGPGQKGHVERAAINAPVQGSAADVAMCA MLEIERNARLKELGWRLLLQVHDEVILEGPTESAEEAKTIVVECMSKPFYGTNILKVDLA VDAKYAKSWYAAK

Transcript Sequence

Transcript ID	Os08t0175300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:4391050:4400757:-1 gene:Os08g0175300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PolI-like DNA polymerase, plastidal DNA polymerase 1 description:PolI-like DNA polymerase. (Os08t0175300-01);Similar to PolI-like DNA polymerase. (Os08t0175300-02)
Sequence	GCCGCTTAAACCCTGGTCCCCCTTGTCTCCCAAACCCTCTCTCCTTCCCCTCGCTTCCGC CTCCGGCCGCCGCCGCCGCCGCCGCGAGGCCACCGCCTGCTGCTGCAGCGGCCTACCCTT GCGTCGGTGCAAGACGGCGCCCTGCGGCTTCGGTTGCGGGGTGGGTGGTGGCGTTGCGGG AGGAGGAGGAGGGAGGCGGGCGGGGTCCAAGCTGAGGCGGCTCGTGAGGTCCATGGCGGT GGCGCCGCCGCTGCCGCCGGCACCGGCGCGGCAGCTACGGCGGTGGAAGGGGTCTTCGCC GCGGCCGCCGCCGTGGCTGTCCTCTCCCTTCCGCCGCACCCGCTACTTGTCGCGCCCGGC CTTCGCCGCGGGAGGAAGGCAAGATTATTCTCCTAGTTCAGGCATGGGGGTTAGCAAAAC CGGTGCTTTCAGGCTTGGATTGTATGGCAACTTAAATGTACAAAGTAGTGTGCAAGAATG GGTTGATGAAACCAAGAGGTTATTTTTCCTCAGGACCACAAACAGTGTCAGAAACAACAT CACTAATGGCACTACTCCTCTGCGGGTTGGAAATCTGCGTCATGATCCCTCAGAAGATAT CAGGAGTTCAAACTATCCTTCCTTGTATAATCAAAGAGAAAGAGGACCATCTAATTCAAT TGTAAATAGACATGTCGATACAGATTTGGCTAAGCATCGTGTGATGTATCAGTCAGCACA TGCTGTGCCTGCCCCATTCAGTGTTGTTAATAATGATATCAAACCACTGAACATGCTTGA TGGCTCCAAGGAGGAAATTCCTTGGCACGATTCCGTTACGATGGAATCTTCTCTGCCTAA AGTTTCCAAGTCAGAGAAAACTTTGGTGGTTGATAAAGCTATCCCAGACAAAAAGGAGCA CAAACGCATTACAAGGAAGGTGACGCCAAATTTCCCGGACAAAGCTTCCTTGTCCACTGA GTCAAAAAATGCACGGAAGTTGCTTGCTACCATCTATGACAAAGTTTTGGTTGTCGACAA TGTTGAGTCAGCTAGGAGTGTTGTTAAATTGCTTACTACAAAGTACAAAGGCTTTATTCA TGCATGTGACACGGAGGTGGCAAATATTGATGTCAAAGAAGAGACACCAGTTGGTCACGG AGAAGTAATATGCTTTAGCATCTGTTCAGGAAATTCTGATGGGGAGGCTGATTTTGGAAA TGGTAAAACATGCATATGGGTGGATGTGCTAGATGGTGGAAGGGATGTTCTAATGGAGTT TGCTCCTTTCTTTGAGGACCCATTTATCAAAAAGGTTTGGCATAACTATAGTTTTGATAT CCATGTCATTGAGAACTGTGGAATCAAGGTTGCTGGATTTCATGCTGATACGATGCATCT TGCACGCCTGTGGGATTCTTCCAGGAGAACTGATGGTGGATATTCACTTGAAGGACTAAC AAATGATTACAGAGTCATGGATGCTGTTCTAAAGGACATACCTAAAACTGGGAAGGTGTC AATGAAAACTATCTTTGGCCGGAAAAAGGTTAGAAAAGATGGATCTGAAGGGAAAACCAT ATCTATCGAGCCAGTCGAAAAGTTACAAAGGGAGGATAGAGAGTTGTGGATTTGCTATTC CTCACTAGATTCAATGAGTACATTGAAGCTTTATGAAAGCTTGAAAAACAAGCTTGAAGC AAAGGAATGGATTTTCGATGATTGTCCTAGAGGAACAATGTATGATTTCTACGAAGAGTA TTGGCGTCCCTTTGGTGCTCTTCTTGTAAAGATGGAAACAGAGGGAGTGCTTGTTGACCG TGCATACCTTTCGGAGATTGAGAAAGCTGCTGTTACTGAACGAGAATTAGCAGCGGATAA GTTTCGGAAATGGGCATCTAAGCATTGTCCTGATGCCAAGTACATGAATGTGAATAGTGA TAATCAAATTCGCCAACTTTTCTTTGGTGGCATCGAAAATAGAAATAAGCGTGGTGAAAC TTGGCCACAAAGTAAAACTTTTAAAGTGCCAAATGATGAAGGCATAGCTACAGAGGGCAA GAAGACTCCAAAGTCTCGCACAATCAAACTTTTCACTATTGTGGAAGATCTTAAAATTGA TATGTTCACCCCGACTGGTTGGCCTTCAGTCAGTGGGGACGTTTTAAGGAGTTTGGCTGG TAAAATACCCACAGATCATATATATAAAATTGATGATGGCCAAGAGTTTGATGAAGATGG GAGCAGTTTGGAACTTCCTGAGCAGGATATAGAAGACACTTCCCCATATGGAACTGCATA TGAAGCGTTTGGTGGAGGAAAGAAGGGAAGGGAAGCATGTCATGCCATTGCTGCTCTATG TGAAGTCTTTTCTATTGACAAATTGATATCCGGCTTCATTGTTCCATTGCAGGGAGATCG TATATCATGCAAGGAAGGGCGCATTCACTGTTCATTAAATATCAATACTGAAACAGGACG CTTGTCAGCAAGAACACCAAACTTACAGAATCAACCTGCTCTTGAAAAGGATAGGTACAA GATTCGCCATGCTTTTGTCGCAGCTCCAGGGAACACTCTTATTGTTGCTGATTATGGCCA ACTGGAACTGAGGATCTTGGCGCATCTTACTAATTGTAAAAGCATGCTGGAAGCTTTCAA GGCTGGTGGTGACTTCCATTCTAGGACAGCCATGAATATGTACCAGCATGTTCGTGATGC TGTTGAAGAAAAGAAAGTTCTGCTTGAATGGCATCCTCAACCAGGTCAAGACAAACCCCC AGTGCCATTATTGAAGGATGCTTTTGGCGCTGAGAGGAGGAAGGCCAAAATGCTTAATTT CTCCATTGCATATGGGAAGACTGCTGTTGGTCTATCTTGGGATTGGAAGGTTTCTGTTAG GGAAGCAAGGGATACACTCAAACTTTGGTATAGGGATAGAAAGGAAGTTTCAGCTTGGCA AAAGAAGCAGAAAGCCTTTGCGCTTGAAAAGTGCGAAGTCTACACTTTGCTCGGGCGATC ACGCCAATTTCCTAATATGACTCATGCGGGTCCTGGTCAAAAGGGTCACGTCGAGCGTGC TGCTATAAATGCACCAGTGCAGGGCAGTGCAGCAGATGTTGCTATGTGTGCAATGCTTGA GATAGAAAGAAACGCTCGCCTTAAGGAGCTTGGTTGGAGACTCCTATTGCAGGTGCATGA TGAAGTAATCTTGGAGGGGCCTACAGAATCTGCCGAGGAAGCCAAGACCATCGTTGTGGA GTGCATGTCCAAGCCTTTCTATGGAACCAACATCCTCAAGGTCGACCTAGCTGTCGACGC CAAGTACGCGAAGAGCTGGTATGCTGCCAAGTAGTAGAATCCGCACTCGGTTCTTCTGCC CTATACATAGCCAGATGAGCACATTTGTCTGCCCCAAAGTTAGGCGACACCAAAGTTATG TGTCGCCGATGCGATGAAGACTCTGCCCATCCGTCCTGACGAAATACAGCGGACTGAACC AGCACAGATAGAGATGCAAGCCGCTCAAGAAGTTGAAGTGCCACCCCCATCACCCACAGG AACACAAGACCACACGTCCATTTTTCGGTGGCAGAGGCAGAGCATCCAAGAACCGAATAG GCTGAAGACTCTTTCACTGGCAGTAGCTGAATGTACACTAGTAGCCTGTCCGATAGTTAC TCCATTAGATTTGGATTTGACTGTAGAGACCACAGTAGATACTGACCTGTATGAGACTTT CAGATACTTGATCATGAAGGAAGTGCAGAAGCATGCTGTCTTCATATGACCTGTTC