Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0174300-00
CDS Infomation

cds chromosome:IRGSP-1.0:8:4325892:4329843:1 gene:Os08g0174300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transferase domain containing protein. (Os08t0174300-00)
Sequence

ATGGCCGCGCAGGTGACCAGGCTGGGCGGCGGCGGCGGCGGCGGCGTGGCGGTCGGCGTG
GCGCTGCACCACGCCGTGGCGGACGGCCGCTCGGTCTGGAGGTTCATCGAGGCCTGGGCG
GCGTGCTGCCGCGGCGACGACGCGTGGAGCGCCGCGCCGGCGCCGGCGTTCGACCGCGCC
GCCGTCGCGCTCCCTGACGGCGAGGAGCTCGCCAGGGACGTGCTCCGGAAGTACGTCCCA
AACCTGCCAGTGGCAACGGTACCCAAGTTCCTCGTCAAGGGCCGCCTGCAGCTCTCCCGC
CGGACGTTCACCGTCGCCGCCGCGCAAATGCTCCGGCTGAAGCAGCGCATCGTCGTCGCC
GGCGCCGGCGGCCTCACGCCGCCGTCCGGCTTCGTGGCGCTCGCGGCGCTGGCGTGGGTG
TCGTTCGTCCGGAGCAAGCACGCGGCGGGCGCCATCGCCGCCGGCGACGAGGTGTACCTC
TTCTTCTTCATCGACTGCCGCGGCCGCCGCGCCGCGTTCGACCCGCCGGTGGGGGAGGGC
TTCTTCGGCACGTGCATCTCCGGCTGCCTCGCCACGGCCACCGCGCGGGACCTGCTCGGC
GGCGGCGACGGCGGGCTGGTCGCCGCCGCCAGGGCCGTGCAGGAGGAGGTGCGGCGAGCG
GCGGAGGACCCGCTCGCCGGCTGGGAGTGGATGTCGCTGGTGGGGCGGATCGCGCTGAGC
CGGCTGGTGAACATGTCGGGGTCGACGAGGTTCCCGGCGTACGAGGCGGCGGACTTCGGG
TGGGGCTCGCCGAGCCGGACGGAGTTGGTGACGATGAACCATGGCGGGCAGGTGGTGCTC
GTCGCCGCCAAGGGCGGCGGTGTGCAGGCGTCGGTGTCGATGAAGCCGGAGCACATGGAC
AAGTTCAAGTCGGATTTTGAGAGCTACTTAGAATGA

Peptide Sequence

PEP ID

Os08t0174300-00
PEP Infomation

pep chromosome:IRGSP-1.0:8:4325892:4329843:1 gene:Os08g0174300 transcript:Os08t0174300-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transferase domain containing protein. (Os08t0174300-00)
Sequence

MAAQVTRLGGGGGGGVAVGVALHHAVADGRSVWRFIEAWAACCRGDDAWSAAPAPAFDRA
AVALPDGEELARDVLRKYVPNLPVATVPKFLVKGRLQLSRRTFTVAAAQMLRLKQRIVVA
GAGGLTPPSGFVALAALAWVSFVRSKHAAGAIAAGDEVYLFFFIDCRGRRAAFDPPVGEG
FFGTCISGCLATATARDLLGGGDGGLVAAARAVQEEVRRAAEDPLAGWEWMSLVGRIALS
RLVNMSGSTRFPAYEAADFGWGSPSRTELVTMNHGGQVVLVAAKGGGVQASVSMKPEHMD
KFKSDFESYLE

Transcript Sequence

Transcript ID

Os08t0174300-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:4325892:4329843:1 gene:Os08g0174300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transferase domain containing protein. (Os08t0174300-00)
Sequence

TCTTCGCAAAAACTGCACCAATTTTTATTTTCCTTCCACCAACCGAGCCGATCGCAGGAA
GCCGAGCGAGACGTCTTTCCTTCGTCTCGCCGCCAGCCATGGCGCCACCACCATCGGTCA
CCGTCATTGAGGACGGCCGCGTCGCCGTGCCGCCTCCGCCGCCGCCAGCCGACGCTGTTC
AAGCTGACCGCGCTCGACGCGCAGTGGATCCCGCTCCCGCTCATCCAGCGGGTGCTCGTG
TTCGACGGCGGCGAGGGGCGCATACCGCCGTTCGAGGACGTCGTCGCCGCCCTCCGCGCG
TCCCTGGCGGAGACGGTGGCGCGGCTACTGCCCCTCGCCGGTAGGATCGTCCACCTGCCG
GAGACGGGGGAGGCGGCGATCGACTGCTCCGGGCGCGGCGGCGGCGTCAGGTTCGTCGTC
GCGGAGTGCGGCGGCGCCGACGCGGCGCGCGTCGCCCGGGACGCCGACCACGACGTGGCG
CTGCTGGAGCAGCTCGCGCCGGTGCTCGACGCCGACGCGCTCCCGGCGGAGACGATGGCC
GCGCAGGTGACCAGGCTGGGCGGCGGCGGCGGCGGCGGCGTGGCGGTCGGCGTGGCGCTG
CACCACGCCGTGGCGGACGGCCGCTCGGTCTGGAGGTTCATCGAGGCCTGGGCGGCGTGC
TGCCGCGGCGACGACGCGTGGAGCGCCGCGCCGGCGCCGGCGTTCGACCGCGCCGCCGTC
GCGCTCCCTGACGGCGAGGAGCTCGCCAGGGACGTGCTCCGGAAGTACGTCCCAAACCTG
CCAGTGGCAACGGTACCCAAGTTCCTCGTCAAGGGCCGCCTGCAGCTCTCCCGCCGGACG
TTCACCGTCGCCGCCGCGCAAATGCTCCGGCTGAAGCAGCGCATCGTCGTCGCCGGCGCC
GGCGGCCTCACGCCGCCGTCCGGCTTCGTGGCGCTCGCGGCGCTGGCGTGGGTGTCGTTC
GTCCGGAGCAAGCACGCGGCGGGCGCCATCGCCGCCGGCGACGAGGTGTACCTCTTCTTC
TTCATCGACTGCCGCGGCCGCCGCGCCGCGTTCGACCCGCCGGTGGGGGAGGGCTTCTTC
GGCACGTGCATCTCCGGCTGCCTCGCCACGGCCACCGCGCGGGACCTGCTCGGCGGCGGC
GACGGCGGGCTGGTCGCCGCCGCCAGGGCCGTGCAGGAGGAGGTGCGGCGAGCGGCGGAG
GACCCGCTCGCCGGCTGGGAGTGGATGTCGCTGGTGGGGCGGATCGCGCTGAGCCGGCTG
GTGAACATGTCGGGGTCGACGAGGTTCCCGGCGTACGAGGCGGCGGACTTCGGGTGGGGC
TCGCCGAGCCGGACGGAGTTGGTGACGATGAACCATGGCGGGCAGGTGGTGCTCGTCGCC
GCCAAGGGCGGCGGTGTGCAGGCGTCGGTGTCGATGAAGCCGGAGCACATGGACAAGTTC
AAGTCGGATTTTGAGAGCTACTTAGAATGATTATTTGACTAGAAAAAATACCCGTGCGTT
GTACGGGTGAAGTTTATTTTAATCTTATTATTATTATATGGTTTA