Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0172200-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:4237020:4242584:1 gene:Os08g0172200 gene_biotype:protein_coding transcript_biotype:protein_coding description:UvrB/UvrC protein domain containing protein. (Os08t0172200-01)
Sequence	ATGCAAGGCATTTTTGCATGTGGTTCAATTTCCTCGGCCCATGGATCATGCTTTAGACCA GCTTGTCTTGCAGTGGATGATCTGAGGCTGTTTTACAAAATAAATTCAGTAACCTGTGGA GCGTACTCGTGGCGTTGGTGTGTGAAAAAACTACATATGAGGACCAATAGAAGGCAAATG GGTACTACGGTGAGAACTAATGCTAGATGGCTATTTGGAGGAGATGGCCGTAGCAGTAGT AATGCAAGGATGGAACGCAGTGAGTCTGCTAACGAAGACATCTTAATCTTCTACTTCCAA TTGGACCTACAAACCCGGATACAGTATGCATTGAATATAGAGCAATTTGATGTGGCAAAA CAATTGAGGGAAAAACTCACAGAGATTGAAACAGTGATAATTAGGCAACGTGAAGCTAAA AGAGGCTCATCAAAGACTGAAGCTCAGGACAAAGCTATAAACCTTTTACGCGTGCGTGCG GATTTGCAAAAGGCCGTTGACAGTGAAAACTATGCTTTGGCAGCTGCACTGCGTGATGAA ATTGCTAAACTTGAGACAGAGTCTCTGGCAGTCTCCGCTAAGGCCCTTGCATATCAAAAT GTGAAATATGCATTTCGACTAGGGCAGAAAGTACGCCATAAGGTACACGGATATAGAGCT GTGATTTGTGGCATGGATCATGTGTGCTGTGAATCCAAGTCATGGATGGAGACAGCAAAT GTGGAAAACTTGTCCAAAGGACCGAATCAACCTTTTTATCAAGTCCTTGTTGATGTATAT GCTGATCCAGAACTCCTTGTTGCATATGTTGCAGAAGAAAATCTTGCAGAGGCTGAAATA CCAGAGAAAGGAAGATTTGATCACCCCTATATTGAATTTCTGTTTTTTGGCGAGGACACT GCTGGGGACTTCATTCCTATCAAGCAGCTTCGTGAGAAGTATGATCAGCCACGTTATGAA GCTTCTGGGGATGAAGATGACGATGATGGCAGCACGGATAGCTGA

Peptide Sequence

PEP ID	Os08t0172200-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:4237020:4242584:1 gene:Os08g0172200 transcript:Os08t0172200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:UvrB/UvrC protein domain containing protein. (Os08t0172200-01)
Sequence	MQGIFACGSISSAHGSCFRPACLAVDDLRLFYKINSVTCGAYSWRWCVKKLHMRTNRRQM GTTVRTNARWLFGGDGRSSSNARMERSESANEDILIFYFQLDLQTRIQYALNIEQFDVAK QLREKLTEIETVIIRQREAKRGSSKTEAQDKAINLLRVRADLQKAVDSENYALAAALRDE IAKLETESLAVSAKALAYQNVKYAFRLGQKVRHKVHGYRAVICGMDHVCCESKSWMETAN VENLSKGPNQPFYQVLVDVYADPELLVAYVAEENLAEAEIPEKGRFDHPYIEFLFFGEDT AGDFIPIKQLREKYDQPRYEASGDEDDDDGSTDS

Transcript Sequence

Transcript ID	Os08t0172200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:4237020:4242584:1 gene:Os08g0172200 gene_biotype:protein_coding transcript_biotype:protein_coding description:UvrB/UvrC protein domain containing protein. (Os08t0172200-01)
Sequence	GAGTGGCCGTCCGCCGCTCCGCGCCTCCGCTCTGCTACCTGCGCCTGCGCGTCGTGCTCC CTGCGTCCATCCCTCGCCACGCCTTGCCGCACCAACAGCGCTCCCTGCACCTCCGCCTCC CTCCCCAATCCGTCCCATCTCCTCGCCCGCCGCCCTCGCCTGCCATCCTGCCAGCAGAGG TGGCGCCGCCGTTCTCCTGCTCCCGCTGCATTCGCTCACCGGTGAGCATCCTAATCCATC CCATCCGGCCTCGGCCTCGTCCTCGAATTTCGTCTCCTCGCCCGGCGTCCTCCTGCATCC ACCGCATCATCGCTCGCCGTTGGGGATCCCACTGACTTGCTGATTGCAACTGTCAGTGTG GTGATTGGACTGCATCAGTTGTGGGAATTGAACTGGTCAAGTCTCAGACTAATACAATGC AAGGCATTTTTGCATGTGGTTCAATTTCCTCGGCCCATGGATCATGCTTTAGACCAGCTT GTCTTGCAGTGGATGATCTGAGGCTGTTTTACAAAATAAATTCAGTAACCTGTGGAGCGT ACTCGTGGCGTTGGTGTGTGAAAAAACTACATATGAGGACCAATAGAAGGCAAATGGGTA CTACGGTGAGAACTAATGCTAGATGGCTATTTGGAGGAGATGGCCGTAGCAGTAGTAATG CAAGGATGGAACGCAGTGAGTCTGCTAACGAAGACATCTTAATCTTCTACTTCCAATTGG ACCTACAAACCCGGATACAGTATGCATTGAATATAGAGCAATTTGATGTGGCAAAACAAT TGAGGGAAAAACTCACAGAGATTGAAACAGTGATAATTAGGCAACGTGAAGCTAAAAGAG GCTCATCAAAGACTGAAGCTCAGGACAAAGCTATAAACCTTTTACGCGTGCGTGCGGATT TGCAAAAGGCCGTTGACAGTGAAAACTATGCTTTGGCAGCTGCACTGCGTGATGAAATTG CTAAACTTGAGACAGAGTCTCTGGCAGTCTCCGCTAAGGCCCTTGCATATCAAAATGTGA AATATGCATTTCGACTAGGGCAGAAAGTACGCCATAAGGTACACGGATATAGAGCTGTGA TTTGTGGCATGGATCATGTGTGCTGTGAATCCAAGTCATGGATGGAGACAGCAAATGTGG AAAACTTGTCCAAAGGACCGAATCAACCTTTTTATCAAGTCCTTGTTGATGTATATGCTG ATCCAGAACTCCTTGTTGCATATGTTGCAGAAGAAAATCTTGCAGAGGCTGAAATACCAG AGAAAGGAAGATTTGATCACCCCTATATTGAATTTCTGTTTTTTGGCGAGGACACTGCTG GGGACTTCATTCCTATCAAGCAGCTTCGTGAGAAGTATGATCAGCCACGTTATGAAGCTT CTGGGGATGAAGATGACGATGATGGCAGCACGGATAGCTGAAAGGTAGGCAGCAAGAGTT GTTTTGATGCCATTTCCGATGCCTTACCACCGACTGAGTTCCGAAATGGTGGAGGAGCTT GACAGCTTGTTACTATCTGATGTAACTACAGCGGGCTAATGTCAGTGAAGACTGGTGACT GGGCTAACCTGGAACCTGAACAATCCACAGCAATCTGCAATGAGGCAATCTGCATTTGAT ATATTGATATCTGACCTTGCAGATTCACGATTGAGGATAACACCCATATAGTGGCCAATC CATGAAGCCCTTTACATATACGGTTCTAAAGAAGATCCTTGTGGATTTGCAGTCTGTACT TCCCCAAGTTCTTCTGTAACTGTGTTCCCTCTGATGGGAATTTTGTAGATAAGCTGCATT CATCAAACCTGCAACTCTGCAGCTGCAGAGAAAGCAAAGGGTTGACGTACATCTATTGGA AAGTTGGAATATACTTACGTGGAAAACTGCAAACCACAGAATTTTTGACGCTCGGGGAAA ATAACC