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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0167249-00
CDS Infomation

cds chromosome:IRGSP-1.0:8:3936725:3937252:1 gene:Os08g0167249 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to CTV.15. (Os08t0167249-00)
Sequence

ATGGCGAGGTCGACCACGCCGACGCCGGCGTCCCCCTCCGTCTGCCGCCGCGTCAGGCTC
TCATCCGGCGCCGGTGCACGCTCGCCGCCGCCGCCCACGCGCCAGCCGAATGGCGGCGGC
CTCCTCCCGTCCGCCTTCCGCGTCGCGCTCCCCCACGCCACGGCCGCCGTCGTGTCGTCG
TCGCGCGGCGGCGGCGGCCTCGGCGCGCGCAGCAGGAGGAGGGAGTGCGCGTGCTCGCCC
ACCACGCACCCGGGCTCCTTCCGGTGCGCGCTGCACCGGGGCGCGGCGTCGCCGTCGCGT
CCCTCCGTGGCGGCGGCGTGCGGCGGGCTGCGCGAGGACGCGAGGAGGTCGGCGATGGCG
AACTCGCTGGTGCGCATCGCGGCGGTGGAGGGCGGCGACCACGTCCGCCGCGCCGTGGCG
GCGCTCATCCGCCCGTCCTCCCACCACCAGCGCCGCCGCGCCGCCTTCCGCCCGCGCCCC
AGCCGCCTCTCCGCCATGTCCGCCGCCGCCGCCGCCTCGTCGCCATGA

Peptide Sequence

PEP ID

Os08t0167249-00
PEP Infomation

pep chromosome:IRGSP-1.0:8:3936725:3937252:1 gene:Os08g0167249 transcript:Os08t0167249-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to CTV.15. (Os08t0167249-00)
Sequence

MARSTTPTPASPSVCRRVRLSSGAGARSPPPPTRQPNGGGLLPSAFRVALPHATAAVVSS
SRGGGGLGARSRRRECACSPTTHPGSFRCALHRGAASPSRPSVAAACGGLREDARRSAMA
NSLVRIAAVEGGDHVRRAVAALIRPSSHHQRRRAAFRPRPSRLSAMSAAAAASSP

Transcript Sequence

Transcript ID

Os08t0167249-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:3936725:3937252:1 gene:Os08g0167249 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to CTV.15. (Os08t0167249-00)
Sequence

ATGGCGAGGTCGACCACGCCGACGCCGGCGTCCCCCTCCGTCTGCCGCCGCGTCAGGCTC
TCATCCGGCGCCGGTGCACGCTCGCCGCCGCCGCCCACGCGCCAGCCGAATGGCGGCGGC
CTCCTCCCGTCCGCCTTCCGCGTCGCGCTCCCCCACGCCACGGCCGCCGTCGTGTCGTCG
TCGCGCGGCGGCGGCGGCCTCGGCGCGCGCAGCAGGAGGAGGGAGTGCGCGTGCTCGCCC
ACCACGCACCCGGGCTCCTTCCGGTGCGCGCTGCACCGGGGCGCGGCGTCGCCGTCGCGT
CCCTCCGTGGCGGCGGCGTGCGGCGGGCTGCGCGAGGACGCGAGGAGGTCGGCGATGGCG
AACTCGCTGGTGCGCATCGCGGCGGTGGAGGGCGGCGACCACGTCCGCCGCGCCGTGGCG
GCGCTCATCCGCCCGTCCTCCCACCACCAGCGCCGCCGCGCCGCCTTCCGCCCGCGCCCC
AGCCGCCTCTCCGCCATGTCCGCCGCCGCCGCCGCCTCGTCGCCATGA