Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0162400-02
CDS Infomation	cds chromosome:IRGSP-1.0:8:3686062:3687934:-1 gene:Os08g0162400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os08t0162400-01);Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os08t0162400-02)
Sequence	ATGGCGGCGGAGTCGTCGGCTGCTGCTGCTGCGGGCGGGGGCGAGAGGAGGGGCCCGATG GATCTGAACCTGTATCTCGGCCTCCCTCCGCTGCCGCCGCCTCCGGGAAGGCTGGATGTC GCCGCCGATTACCCGTCGCTGCTGCTGAACTCCGCCGCCACGGTGGCGAACGAGCAAAGG GGCTCGGTGGTGGTGGCGGCACCGCCTCCGGCGGCGGCGGCGTACTCGCCGTCGAACGCG CTGTCAGCGCCGGAGCAGGTGCTGGTAGATCCTGTTGCAGCGTGGCTTGTTGATCCCGGT GAGCAGCAGCCGGTGCCGCCGCTCGAGACGCCATCGTACATGGCCAGGGCCTCGTCGACG CTGCCACAGATTTTTGCTTGTGCAGCGTTGGAAATGCTTGTGCAGACCGGTGGAGCAATC CCACCTACTGGTCTTATAAGGGGAGCAGAGATTGCTGCTGCAAGCCGCCCTATGACGCCG GAGAATCGGCTGCGGAGGTTGATCCAGGTGAGCGATCAACACGGCGTCGGGAATGGGAGG GCGGGGACTGGGCCAGTGAGCCGCAGCCGACGGGCGAATAGCCCGGAAGCCGATAATCTG GCGCGGGCCATCCAGAGGTCTCATAATTCTCTTGAGGCATCAAGGAGGCAGATGCTTGAT GGTGATGGCAGTGATGCCACCAAGAAGGATGACGGTTGCGGATGCAACGGCAGCTTCGAA TGCAATATCTGCTTTGAATCAGCTAAAGATCCTGTGGTTACCCCTTGTGGCCACCTCTTC TGCTGGCCTTGCATATACCAGTGGCTTCATGGACATTCAGAGCACTCTGATTGCCCTGTC TGCAAGGGCGAGGTGCTCGAAGTAAACGTCACACCGATTTATGGAAGAGGAGGTGGCGAG GAGAACTCCTCCAGAAATGATATCCAAATCCCTCCCAGGCCGAGTGCGCAGAGGACCGAG AGCTTGAGGCAGCAGCTGCAAAGGCCAGACACAAGAGGAGGCATTGCAAACATGGTGAGG CGGTTGATGCAAAACCAAGATATAGTGGTAGGCCAGGCGGCTTCATCTGCACCCCGGCCA AGGGGTAGGGGTCGAAGGCAGGCAAGACAAGATGCGCCTTCTGCACCAGCAACACAGCAG CAGGTGGTCAATGCTGATGCTGGGAGTGGCAATCAGGCTCCTTTGCCACCTCCTGATGCT AATGGTGCTGCACCGGCTGCTGCTGTCGCTCCCCAACAGTCATCATCTGTGGAGCAAGCG TCGACTTCTAGCACCGTGGGTGTTATAGCGGGAGGGCCAGCACAAGGTAGGAGGTCAAGA GTTTCTGAATCCACCCCTGCAAGGAGGACAAGGAGGAGGCATCAGTAG

Peptide Sequence

PEP ID	Os08t0162400-02
PEP Infomation	pep chromosome:IRGSP-1.0:8:3686062:3687934:-1 gene:Os08g0162400 transcript:Os08t0162400-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os08t0162400-01);Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os08t0162400-02)
Sequence	MAAESSAAAAAGGGERRGPMDLNLYLGLPPLPPPPGRLDVAADYPSLLLNSAATVANEQR GSVVVAAPPPAAAAYSPSNALSAPEQVLVDPVAAWLVDPGEQQPVPPLETPSYMARASST LPQIFACAALEMLVQTGGAIPPTGLIRGAEIAAASRPMTPENRLRRLIQVSDQHGVGNGR AGTGPVSRSRRANSPEADNLARAIQRSHNSLEASRRQMLDGDGSDATKKDDGCGCNGSFE CNICFESAKDPVVTPCGHLFCWPCIYQWLHGHSEHSDCPVCKGEVLEVNVTPIYGRGGGE ENSSRNDIQIPPRPSAQRTESLRQQLQRPDTRGGIANMVRRLMQNQDIVVGQAASSAPRP RGRGRRQARQDAPSAPATQQQVVNADAGSGNQAPLPPPDANGAAPAAAVAPQQSSSVEQA STSSTVGVIAGGPAQGRRSRVSESTPARRTRRRHQ

Transcript Sequence

Transcript ID	Os08t0162400-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:3686062:3687934:-1 gene:Os08g0162400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os08t0162400-01);Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os08t0162400-02)
Sequence	ATTCCCATTTCCTAAAAAAAAAATCCCCAAATCTCCACATGATTCCTCCGTAATTCGGCG CGCCCTCTCATGGCGTCCCTCGCCGAATTCCCCCTCCCGGTGATCTCTCCGACTTGCTGG AGCTATCGGTAGCGGGAGGAATCAATCAATCAATCCCCCACGCTGGGTGGTTCTTGAGCA AGAACGGCTCGTCGCCGTGCCGATCGATCACGTCGGCCGCCGGGGAAATCCTCTGGGGAT TTGTGGGTGGTTTTGGGCTAAAGATTCCGTTTCTTTCGAGCCCTTTTGGTCTCGGGTGGA TCCGCTTAGCTTTGGTTCTTTTGCTGGTTGGGGGGCATGGCGGCGGAGTCGTCGGCTGCT GCTGCTGCGGGCGGGGGCGAGAGGAGGGGCCCGATGGATCTGAACCTGTATCTCGGCCTC CCTCCGCTGCCGCCGCCTCCGGGAAGGCTGGATGTCGCCGCCGATTACCCGTCGCTGCTG CTGAACTCCGCCGCCACGGTGGCGAACGAGCAAAGGGGCTCGGTGGTGGTGGCGGCACCG CCTCCGGCGGCGGCGGCGTACTCGCCGTCGAACGCGCTGTCAGCGCCGGAGCAGGTGCTG GTAGATCCTGTTGCAGCGTGGCTTGTTGATCCCGGTGAGCAGCAGCCGGTGCCGCCGCTC GAGACGCCATCGTACATGGCCAGGGCCTCGTCGACGCTGCCACAGATTTTTGCTTGTGCA GCGTTGGAAATGCTTGTGCAGACCGGTGGAGCAATCCCACCTACTGGTCTTATAAGGGGA GCAGAGATTGCTGCTGCAAGCCGCCCTATGACGCCGGAGAATCGGCTGCGGAGGTTGATC CAGGTGAGCGATCAACACGGCGTCGGGAATGGGAGGGCGGGGACTGGGCCAGTGAGCCGC AGCCGACGGGCGAATAGCCCGGAAGCCGATAATCTGGCGCGGGCCATCCAGAGGTCTCAT AATTCTCTTGAGGCATCAAGGAGGCAGATGCTTGATGGTGATGGCAGTGATGCCACCAAG AAGGATGACGGTTGCGGATGCAACGGCAGCTTCGAATGCAATATCTGCTTTGAATCAGCT AAAGATCCTGTGGTTACCCCTTGTGGCCACCTCTTCTGCTGGCCTTGCATATACCAGTGG CTTCATGGACATTCAGAGCACTCTGATTGCCCTGTCTGCAAGGGCGAGGTGCTCGAAGTA AACGTCACACCGATTTATGGAAGAGGAGGTGGCGAGGAGAACTCCTCCAGAAATGATATC CAAATCCCTCCCAGGCCGAGTGCGCAGAGGACCGAGAGCTTGAGGCAGCAGCTGCAAAGG CCAGACACAAGAGGAGGCATTGCAAACATGGTGAGGCGGTTGATGCAAAACCAAGATATA GTGGTAGGCCAGGCGGCTTCATCTGCACCCCGGCCAAGGGGTAGGGGTCGAAGGCAGGCA AGACAAGATGCGCCTTCTGCACCAGCAACACAGCAGCAGGTGGTCAATGCTGATGCTGGG AGTGGCAATCAGGCTCCTTTGCCACCTCCTGATGCTAATGGTGCTGCACCGGCTGCTGCT GTCGCTCCCCAACAGTCATCATCTGTGGAGCAAGCGTCGACTTCTAGCACCGTGGGTGTT ATAGCGGGAGGGCCAGCACAAGGTAGGAGGTCAAGAGTTTCTGAATCCACCCCTGCAAGG AGGACAAGGAGGAGGCATCAGTAGGTAACTTAGAGTTGTTACTGTAATAGAACATATACA CCATGTTTCCTTGTAACCTTGATCATATTTAGGCTCATCCCAAAATTATGTAGAATTGTG GATGAAATCTTTTCTTTTATTTACCTTGTATCCACCATTTTACCTTAGGCAAAGGAATAA AGATTTCGATTTC