Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0161900-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:3622755:3624999:-1 gene:Os08g0161900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DnaJ domain protein B8 description:Molecular chaperone, heat shock protein, Hsp40, DnaJ domain containing protein. (Os08t0161900-01)
Sequence	ATGGGGATGGATTACTACAACGTGCTGAAGGTGAACCGGAACGCGACGGAGGAGGATCTC AAGAAGTCGTACCGGCGGATGGCGATGAAGTGGCACCCCGACAAGAACCCCGGCGACAAG AAGAAGGAGGCCGAGGCCAAGTTCAAGAAGATCTCCGAGGCCTACGAGGTTTTGAGTGAT CCACAGAAGAGGGCAATATATGATAAATATGGAGAGGAGGGTCTGAAGGCCTCTGTGGAT GCAGGGGCTTCATCATCCATGAATGGCAACCGCCGGTTCAATCCTCGGAACGCTGAAGAT GTATTCGCCGAGTTCTTTGGCAGCAGCAAGCCCTTTGAGGGAATGGGGCGCGCAAAGTCA ATGAGGTTCCAGACAGAAGGTGCTGGCACTTTTGGTGGATTTGGTGGTGGGAATGAGAAC AAGTTCAGATCATACAATGATTCAGCCGGCACCAGTTCAAGCCAGCCCCGGAAGCCACCA GCCGTGGAGACAAAATTGCCTTGCACACTGGAAGAGCTATATGCTGGTTCGACGCGAAAG ATGAAGATATCCAGGAACGTTGTCAGGCCTACTGGCCAAATAGGAACTGAATCAGAGATT CTAACTATCGATATAAAGCCCGGATGGAAGAAAGGAACCAAGATTACGTTCCCGGACAAG GGGAATGAGCAGCCAAACCAGCTCCCTGCTGACCTTGTATTTGTAATAGATGAAAAGCCC CATGATCTGTACACAAGAGAAGGTAATGATCTCCTTGTGCACCAGAAGATTGAATTGGTG GATGCGTTAGCAGGAACCACCGTTAATCTGAAGACTCTCGATGGCCGGGACCTGGTGATC AAGCTCACTGATGTGGTCACACCTGGGTACGAGCTCGCGATCGCAAAGGAAGGGATGCCT ATTGTCAAGGAGAATGGGAGGAGAGGCAATCTAAGGATCAAGTTCGACATCGTTTTCCCC AAGAGGTTATCGTCAGATCAGCGGCAGAACATTAGGAAGGTTCTTGGAGGGCAAACTCAG CAGCAGTGA

Peptide Sequence

PEP ID	Os08t0161900-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:3622755:3624999:-1 gene:Os08g0161900 transcript:Os08t0161900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DnaJ domain protein B8 description:Molecular chaperone, heat shock protein, Hsp40, DnaJ domain containing protein. (Os08t0161900-01)
Sequence	MGMDYYNVLKVNRNATEEDLKKSYRRMAMKWHPDKNPGDKKKEAEAKFKKISEAYEVLSD PQKRAIYDKYGEEGLKASVDAGASSSMNGNRRFNPRNAEDVFAEFFGSSKPFEGMGRAKS MRFQTEGAGTFGGFGGGNENKFRSYNDSAGTSSSQPRKPPAVETKLPCTLEELYAGSTRK MKISRNVVRPTGQIGTESEILTIDIKPGWKKGTKITFPDKGNEQPNQLPADLVFVIDEKP HDLYTREGNDLLVHQKIELVDALAGTTVNLKTLDGRDLVIKLTDVVTPGYELAIAKEGMP IVKENGRRGNLRIKFDIVFPKRLSSDQRQNIRKVLGGQTQQQ

Transcript Sequence

Transcript ID	Os08t0161900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:3622755:3624999:-1 gene:Os08g0161900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DnaJ domain protein B8 description:Molecular chaperone, heat shock protein, Hsp40, DnaJ domain containing protein. (Os08t0161900-01)
Sequence	CCCTACTCGCTGTCGCCTTCCACCATCTCCGCCACCTTCTCCTTCCCTCCCAAGATCTCT TCTTTGGATGCCGCGCTGAAAGATTCGCTTTCTTGGTTGGTTGGTTGATCGATCCGGTGC CCGGATTTGGGGAGGAATTAAAGGTGGCGCCTTGGCGAAGCAGTAGATTCTTTGATTGCT TGTTTGATTGGTGGTTCTTGAGCGAGAAGAGAGAGACTGATTGATTGGTGGAGAAGCTGT GAGGTGGGGTTTGAAAGGAGGCGCGTTCTTGTGGGGGATTTGGGAAGGGGGGGGGGGGAA TTTCGGTCTCGTTGGTTCGGATCTTGTTGGTGTGTAGTAGTAGTAGTTGGGCATGAGCGT CGGGGGAGATGGGGATGGATTACTACAACGTGCTGAAGGTGAACCGGAACGCGACGGAGG AGGATCTCAAGAAGTCGTACCGGCGGATGGCGATGAAGTGGCACCCCGACAAGAACCCCG GCGACAAGAAGAAGGAGGCCGAGGCCAAGTTCAAGAAGATCTCCGAGGCCTACGAGGTTT TGAGTGATCCACAGAAGAGGGCAATATATGATAAATATGGAGAGGAGGGTCTGAAGGCCT CTGTGGATGCAGGGGCTTCATCATCCATGAATGGCAACCGCCGGTTCAATCCTCGGAACG CTGAAGATGTATTCGCCGAGTTCTTTGGCAGCAGCAAGCCCTTTGAGGGAATGGGGCGCG CAAAGTCAATGAGGTTCCAGACAGAAGGTGCTGGCACTTTTGGTGGATTTGGTGGTGGGA ATGAGAACAAGTTCAGATCATACAATGATTCAGCCGGCACCAGTTCAAGCCAGCCCCGGA AGCCACCAGCCGTGGAGACAAAATTGCCTTGCACACTGGAAGAGCTATATGCTGGTTCGA CGCGAAAGATGAAGATATCCAGGAACGTTGTCAGGCCTACTGGCCAAATAGGAACTGAAT CAGAGATTCTAACTATCGATATAAAGCCCGGATGGAAGAAAGGAACCAAGATTACGTTCC CGGACAAGGGGAATGAGCAGCCAAACCAGCTCCCTGCTGACCTTGTATTTGTAATAGATG AAAAGCCCCATGATCTGTACACAAGAGAAGGTAATGATCTCCTTGTGCACCAGAAGATTG AATTGGTGGATGCGTTAGCAGGAACCACCGTTAATCTGAAGACTCTCGATGGCCGGGACC TGGTGATCAAGCTCACTGATGTGGTCACACCTGGGTACGAGCTCGCGATCGCAAAGGAAG GGATGCCTATTGTCAAGGAGAATGGGAGGAGAGGCAATCTAAGGATCAAGTTCGACATCG TTTTCCCCAAGAGGTTATCGTCAGATCAGCGGCAGAACATTAGGAAGGTTCTTGGAGGGC AAACTCAGCAGCAGTGAGCACATTTTCAGAAGCAAATCGACTGTGCCATAGTTCTTGAGA TAAACAGACTAATTCAGAGCTCTTGTTCTTCTTCTCCAGTTGGCTTGTACACATAGTTAT TTTTCATTTGGAGTTGTTCATCTTTGATCTGCCCCCCTTCTTGGAAAAATAGCAATGTTA ATTGATGACCACTACACGTGTAAGCAAAAACACATATCATTACACTTGAAATACAGAGTG CAATGCAATGTACGTTTGGTG