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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0161700-01
CDS Infomation

cds chromosome:IRGSP-1.0:8:3613402:3615762:1 gene:Os08g0161700 gene_biotype:protein_coding transcript_biotype:protein_coding description:NADH dehydrogenase [ubiquinone] (complex I), iron-sulphur protein 6, mitochondria domain containing protein. (Os08t0161700-01)
Sequence

ATGGCGACCGCCGCGAGACGTCTGCTCCTCCCGGCGCTCCGCAAGTCCCTACCCGCGGCC
AACGGCGCCGCGCGAGGCGTCTCCACGGAGAGGGCGGTCGGCGCCGCCGCCGTCGTCGGC
AGCCACACCGCCAAGTGGATGCAGGACACAAGCAAGAAGTCCCCAATGGAATTGATCAAC
GCAGTACCTCCGATCAAGGTTGAAGGACGAATTGCTGCTTGTGATGGGCGTCAGGATAAA
GGTCGTGAAACTGGTTCCCTCGGCCATCCGATCGAATATATCTGCCTTGACCTGGACCAG
CCTGCTGTATGCAAGTACTGTGGTCTCCGTTTTGTTCAAGATCACCATCACTGA

Peptide Sequence

PEP ID

Os08t0161700-01
PEP Infomation

pep chromosome:IRGSP-1.0:8:3613402:3615762:1 gene:Os08g0161700 transcript:Os08t0161700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:NADH dehydrogenase [ubiquinone] (complex I), iron-sulphur protein 6, mitochondria domain containing protein. (Os08t0161700-01)
Sequence

MATAARRLLLPALRKSLPAANGAARGVSTERAVGAAAVVGSHTAKWMQDTSKKSPMELIN
AVPPIKVEGRIAACDGRQDKGRETGSLGHPIEYICLDLDQPAVCKYCGLRFVQDHHH

Transcript Sequence

Transcript ID

Os08t0161700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:3613402:3615762:1 gene:Os08g0161700 gene_biotype:protein_coding transcript_biotype:protein_coding description:NADH dehydrogenase [ubiquinone] (complex I), iron-sulphur protein 6, mitochondria domain containing protein. (Os08t0161700-01)
Sequence

GTGCAGACAGCTCCTCCTCCCCCATCGGCCATGGCGACCGCCGCGAGACGTCTGCTCCTC
CCGGCGCTCCGCAAGTCCCTACCCGCGGCCAACGGCGCCGCGCGAGGCGTCTCCACGGAG
AGGGCGGTCGGCGCCGCCGCCGTCGTCGGCAGCCACACCGCCAAGTGGATGCAGGACACA
AGCAAGAAGTCCCCAATGGAATTGATCAACGCAGTACCTCCGATCAAGGTTGAAGGACGA
ATTGCTGCTTGTGATGGGCGTCAGGATAAAGGTCGTGAAACTGGTTCCCTCGGCCATCCG
ATCGAATATATCTGCCTTGACCTGGACCAGCCTGCTGTATGCAAGTACTGTGGTCTCCGT
TTTGTTCAAGATCACCATCACTGAGAAGACAAGATGCAGTCCTTCACCACACTGAAATTT
GGAATTGAATGTGTGTATTTGGTTTAAAATGTTCCAGTCAGCGTGTCATGTATTCTGCCT
GATGGCAAGATGATGATATCTTTGACGATCATCGTACTTTGAATGACATAATAATGCCCG
CTTTAATAACAGTGGATTTCTTTTTCTTT