Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0161500-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:3596518:3601575:-1 gene:Os08g0161500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha/beta hydrolase fold-1 domain containing protein. (Os08t0161500-01)
Sequence	ATGCTGTCGGGGTGCACGGTGTCCAGTCTCGCGGCGAGGTTCGCCTTCTTCCCGCCGGAG CCGGCGACCTACGCCGTCAGGAAGGATGAGGCGTGCGGCGGCGGAGGGCGGCTGGTGGCG TCGGGCGTCCCGCGGGACGCCGCCGTGGACGTGCTGCTGGTGGACACCAGGAAGGGGAGC AAGGTGGTGGCCTTCTACCTGAGGAACCCCGCCGCCCGCCTCACCGTGCTCTACTCGCAC GGCAACGCCGCCGACCTCGGCCAGCTCTACGACCTCTTCGTGCAGCTCAAGGTCAATCTC AAGGTCAATCTGATGGGATATGACTACTCTGGGTATGGAGCATCTACTGGCAAGCCAAGT GAAGAGAATACATATGCAGACATTGAGGCAGTTTACCAGTGCTTAGAAACAGAGTATGGA ATCAGTCAGGAAGACCTTATCTTGTATGGACAATCTGTTGGCAGTGGACCTACATTGCAT TTAGCTTCCCGTTTACCAAGATTGCGTGGCGTGGTTCTTCATAGCGCTATACTGTCAGGC CTCCGAGTTGTTTGCCATGTGAACTTTACTTTCTGCTTTGACATCTACAAAAATGTGAAG AAAATCAAAAAGGTTAAATCCCCAGTGCTTGTTATTCATGGAACTGATGATGATGTCGTG AACTGGTCGCATGGTAACGAGCTGTGGAAACTGGCGAGGGAGCCTTACGATCCGCTATGG ATCAAAGGAGGAGGCCATTGCAACCTGGAGCTGTACCCGGACTTCATCCGCCACCTCTCC AAGTTCATCCGCGAGATGGAGAACATCACAACGAAGACAAGGCTTAAGAAGATCCGGCAG TCCCTGCAACCCGCACCTAAGAAGGTCCACCACCGGGCGAGCACCGGGACGACCACCACC TTCACCACCAACTGCTGCTGCCGCATCCGGGTCCGCAAACCGAGTTGCCGTTGCCCTGGC TGCAACCTAAGCTGCGGCTGCTGCTCTGGTCTGATGAGTTGCTTCTCATCCCGGCTGTTC AAGTGCTCAACCTGCTTCTCCTCCTGCAGCTGCAGGGGATGCTTCAAGTGCCCAACCTGC TTCTCCTTCTCCTGCAGCTGCTGCAGGAGCTGCCTCAAGTGCCCAACCTTCAAATGCTGC TGCTGCGGTTCATGCAGAGATGAGCAATAA

Peptide Sequence

PEP ID	Os08t0161500-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:3596518:3601575:-1 gene:Os08g0161500 transcript:Os08t0161500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha/beta hydrolase fold-1 domain containing protein. (Os08t0161500-01)
Sequence	MLSGCTVSSLAARFAFFPPEPATYAVRKDEACGGGGRLVASGVPRDAAVDVLLVDTRKGS KVVAFYLRNPAARLTVLYSHGNAADLGQLYDLFVQLKVNLKVNLMGYDYSGYGASTGKPS EENTYADIEAVYQCLETEYGISQEDLILYGQSVGSGPTLHLASRLPRLRGVVLHSAILSG LRVVCHVNFTFCFDIYKNVKKIKKVKSPVLVIHGTDDDVVNWSHGNELWKLAREPYDPLW IKGGGHCNLELYPDFIRHLSKFIREMENITTKTRLKKIRQSLQPAPKKVHHRASTGTTTT FTTNCCCRIRVRKPSCRCPGCNLSCGCCSGLMSCFSSRLFKCSTCFSSCSCRGCFKCPTC FSFSCSCCRSCLKCPTFKCCCCGSCRDEQ

Transcript Sequence

Transcript ID	Os08t0161500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:3596518:3601575:-1 gene:Os08g0161500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha/beta hydrolase fold-1 domain containing protein. (Os08t0161500-01)
Sequence	GCGTGCGTGGCTGGCTGAAGGCTGTGAGAGTGTGAGGTCTAGCTGTGCAATGTGCAGGTG CAGCCATCGCTGCTGCTGCTGCTGCTCTGCTCTTTTCATGTTGACACTTCGCTAAACCCC TCCCAAAACCTCCTCCCCCCCCCCCCCCCCCCGATGCGTTCTTGGCCAGGGTCGGGAGCG AGGCGTTCTTGATTTTTTTCTTCTTCTGTTTTTGTTCTTGATTGATTGGATTGGGGAGTG ATTCGGTTTGTTCTTGATTTTGATTTTTTGTTGTTGTTGTTGTTGTTTGGGGAGAAAGAG ACGAAGGGGAAGCTGTGATTTTCTCTTCCTTTCCACCGAGAGAAAATTTTTTGATCTGTT TGTTGTTTCTTGGAATCGGTTTTGGTTCAAGAACAGGCGCCGCCTTTTGTTCCGGGAAAT TCGCTTGTGATCCTCCGAAACCCAGAATTTCTTTTTTCGATCCGTTTTGATCGATTGAAA GCAAATATCATCTTGAAAAGGATCGTTCTTGCTGGTGTTGGTTTGGGGAGGAGGGGGAGG TTTTCCCTCTGACGAGCAAGCAAAGCATTTGGGGCCGCCTGTCGATGACTGAGGGTTTGA TCCGATGCTGTCGGGGTGCACGGTGTCCAGTCTCGCGGCGAGGTTCGCCTTCTTCCCGCC GGAGCCGGCGACCTACGCCGTCAGGAAGGATGAGGCGTGCGGCGGCGGAGGGCGGCTGGT GGCGTCGGGCGTCCCGCGGGACGCCGCCGTGGACGTGCTGCTGGTGGACACCAGGAAGGG GAGCAAGGTGGTGGCCTTCTACCTGAGGAACCCCGCCGCCCGCCTCACCGTGCTCTACTC GCACGGCAACGCCGCCGACCTCGGCCAGCTCTACGACCTCTTCGTGCAGCTCAAGGTCAA TCTCAAGGTCAATCTGATGGGATATGACTACTCTGGGTATGGAGCATCTACTGGCAAGCC AAGTGAAGAGAATACATATGCAGACATTGAGGCAGTTTACCAGTGCTTAGAAACAGAGTA TGGAATCAGTCAGGAAGACCTTATCTTGTATGGACAATCTGTTGGCAGTGGACCTACATT GCATTTAGCTTCCCGTTTACCAAGATTGCGTGGCGTGGTTCTTCATAGCGCTATACTGTC AGGCCTCCGAGTTGTTTGCCATGTGAACTTTACTTTCTGCTTTGACATCTACAAAAATGT GAAGAAAATCAAAAAGGTTAAATCCCCAGTGCTTGTTATTCATGGAACTGATGATGATGT CGTGAACTGGTCGCATGGTAACGAGCTGTGGAAACTGGCGAGGGAGCCTTACGATCCGCT ATGGATCAAAGGAGGAGGCCATTGCAACCTGGAGCTGTACCCGGACTTCATCCGCCACCT CTCCAAGTTCATCCGCGAGATGGAGAACATCACAACGAAGACAAGGCTTAAGAAGATCCG GCAGTCCCTGCAACCCGCACCTAAGAAGGTCCACCACCGGGCGAGCACCGGGACGACCAC CACCTTCACCACCAACTGCTGCTGCCGCATCCGGGTCCGCAAACCGAGTTGCCGTTGCCC TGGCTGCAACCTAAGCTGCGGCTGCTGCTCTGGTCTGATGAGTTGCTTCTCATCCCGGCT GTTCAAGTGCTCAACCTGCTTCTCCTCCTGCAGCTGCAGGGGATGCTTCAAGTGCCCAAC CTGCTTCTCCTTCTCCTGCAGCTGCTGCAGGAGCTGCCTCAAGTGCCCAACCTTCAAATG CTGCTGCTGCGGTTCATGCAGAGATGAGCAATAATGCAAATCTCTATGTGCTTGTGTATA GGAAAAAGAGTGGTTCCGATATATCTGACAAGTTTAATTCTGTAGAAACTAGACCTTGGT TCTCTTAGCTAAACAAACCATAGCAAGAT