Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0159900-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:3514899:3518732:-1 gene:Os08g0159900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Pre-mRNA-processing ATP-dependent RNA helicase PRP5, RNA helicase 42 description:DEAD-like helicase, N-terminal domain containing protein. (Os08t0159900-01);Hypothetical conserved gene. (Os08t0159900-02)
Sequence	ATGGGGTCTAGCGACGAGGCCGGCTCCTCCAAGCACCACCGCCGCGACAAGGAGAAGGAC CGCGAGCGGTCCTCCTCCCGCCACCACCGCGACCGCGACCGCGAGAGATCCTCCTCTCGC CACCACCACCGCGAGGACCGGGATGACGACCGGGATCGGGACCGGGACCGGGAGCGCCGC CACAGGGAGAAGGAGCGGGATCGCGAGGAGCGGAAGGCGCGGGAGCGGGAGGAGCGGGAG AAGGAGAAGGAGAGGGAGCGTGCGCGGCGGCGCGAGGAGAGGGACCGCGAGGAGAGGTCG AGGAGGCGGGAGGCGGCGGCGGAGGAGGAGGAGGAGGATGTGGACCGCGACCGCAAGCGC CGCCGCCGGTCGTCGCACCACCACCACCACCACCGCGACGCGGAGCCGGAGGGGCCGGCT TCGGGGGCCAGGGAGGAGGAGGTGGTGGATGTGGAGGAGGCCGAGAGGCGGCGCCAGAAG AAGAAGGAGGAGGAGCAGAAGCAGCTGGACGAAGAGATGGAGACGCGGCGCCGCCGCATC AAGGAGTGGCAGGAGATGAAGCGCCGCGAGGAGGAGACGAAGCGCCGCGAGCAGGAGGAG GCCGGAGTTGGCACCTCAGCCGCCGCCGCCGCGGCCCCCGCAGAAGCAGAAGATGGCGGC AATGCCGGGAAGAAGTGGACCTTGGATGGCGAGGAGTCTGATGAGGAGGGGAACCAAGAG GATGGTAAGAAATCCGATGATAATGGTGGTTCTGGTGCCGGTGCCATGGACGTTGATGTT CCAAATGGGGGTGATAATGCAAACGGCGCCAATGCTATGGATGAAGATGAGATTGATCCG CTTGATGCGTTCATGAACTCGATGGTATTGCCTGAGGTCGCAAAGCTTGAGAGCATGCCT GCTGCCAATGTGGATGACAAGAATGATAAGAGTGCTAAGGATGCTGTGACTAATGGGGAT AAAAAGGGGCCAAAGAAGGTGATGGGGAGAATTATACAAGGAGAAGACTCAGACTCGGAT TATGCAGATGACGAGGATGATGAGGGTGGTTCCGAAGATGAGGATGATGAGGAGTTCATG AAACGTGTCAAGAAGACAAAGGCAGAAAAGTTGGCTATTGTTGACCATTCTAAGATCGAC TACCAGCCGTTCCGGAAGAATTTCTACATTGAGGTGAAGGATATTACAAAGATGGCAGCT GAGGAAGTGGCAGCTTATCGGAAGCAGTTGGAGCTCAAGGTGCATGGGAAAGATGTACCC AAGCCAATAAAGACATGGGTGCAGAGTGGGCTTACCAGCAAGCTCCTTGATACAATCAAG AAACTTGGTTTCGAGAAACCGATGTCTATACAGGCACAAGCACTGCCGATCATAATGAGT GGGCGTGATTGTATAGGAATTGCAAAGACTGGATCAGGCAAGACTCTAGCATTTGTCCTG CCTATGCTGAGGCATGTCAAAGATCAGCCGGCTGTTGTTCCTGGAGATGGCCCAATTGGG CTTATAATGGCTCCTACTAGAGAGCTTGTGGTGCAGATACATTCAGACATTAAGAAGTTT TCGAAGGCGCTTGGCATCAACTGTGTTGCTATCTATGGAGGTTCTGGAGTTGCCCAGCAG ATCAGTGAACTGAAGAGGGGTGCTGAAATTGTTGTTTGTACACCAGGCAGGATGATTGAT ATTCTTTGCACAAGCAGTGGGAAGATTACTAATCTTCGGAGAGTTACATTCTTGGTGATG GATGAAGCTGATAGGATGTTTGATATGGGTTTTGAGCCTCAGATTACTCGGATAGTTCAG AATACTCGTCCAGATAGGCAGACAGTTCTTTTCTCAGCCACTTTTCCACGTCAGGTGGAG ATACTGGCCCGTAAGGTGCTGACAAAGCCTGTTGAGATCCAGGTGGGTGGGAGGAGTGTC GTCAACAAAGATATCACACAACTGGTTGAGGTGCGGCCAGAAAATGAGAGGTTCTTTAGG CTGTTGGAGCTGCTTGGAGAGTGGTTTGATAAAGGTAAAATTCTTGTTTTTGTCCATTCA CAAGATAAATGTGATTCTCTACTCAAAGACCTGTTCCAGCATGGATATCCATGCCTATCC CTGCATGGTGGGAAAGACCAGACTGACCGTGAATCAACACTAGCTGATTTCAAGAGCAAT GTGTGCAGCTTGCTGATTGCTACCAGTGTTGCTGCTAGGGGTTTAGATGTCAAGGAGCTT GAGCTTGTTGTGAATTATGATGTCCCGAACCACTATGAGGATTATGTTCATCGTGTTGGA CGAACTGGACGTGCTGGGAGGAAGGGATTTGCCGTGACTTTTATTTCTGAGGAAGAGGAG CGTTATGCTCCAGACCTTGTTAAAGCTTTGGAGCTCTCAGAGCAGGCTGTTCCAGAGGAC CTGAAAGGTCTAGCTGATCGTTTTATGGCAAAGGTGAAGCAGGGAACAGAGCAGGCCCAT GGAACAGGATATGGTGGAAGCGGTTTCAAGTTCAATGAAGAGGAGGATGAAGCACGGAAA TCTGCAAAGAAGGCTCAGGCAAGGGAATATGGTTATGAGGAGGACAAGTCAGATTCAGAT TCTGATGAGGAAGGAGGGGTTCGTAAGGCGGGAGGTGACCTTGCGGCACAAGCTATTGCT GCTGCTCAAGCTGCTGCTGCTATGGTTGCAGCAAAGGCTGCTAGCAATGCCAACCAGCAA ACACAAGGCACTTCTGTAGGGCCCTTGCTTCCTCTAGCCATTGCTTCAAACACACAGAAT AACGAGGCCACAGCACGTGCACTGCAGGCTGCATTTAACATACAGCAAAATCTGGCAAGG ATACAAGCACATGCAGTCCCAGAACATTATGAGGCTGAGCTTGAGATTAATGATTTCCCA CAAAATGCCCGCTGGAAGATCACTCACAAAGAAACATTGGGTCCTATCCAGGAATGGACG GGTGCTGCAATCACTACAAGGGGAACCTTTTTTCCTCAAGGAAAAATTGTTGGTGCTAAT GAACGCAAGCTGTACCTGTTCATAGAGGGCCCCACTGAGCTATCTGTCAAGAAGGCGAAA GCAGAATTGAAGCGTGTCCTTGAAGATTGTGCCAACCATGCTCTGAACCTTCCTGGTTCT GCCCAAACTGGAAAGTACTCTGTTATTTGA

Peptide Sequence

PEP ID	Os08t0159900-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:3514899:3518732:-1 gene:Os08g0159900 transcript:Os08t0159900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Pre-mRNA-processing ATP-dependent RNA helicase PRP5, RNA helicase 42 description:DEAD-like helicase, N-terminal domain containing protein. (Os08t0159900-01);Hypothetical conserved gene. (Os08t0159900-02)
Sequence	MGSSDEAGSSKHHRRDKEKDRERSSSRHHRDRDRERSSSRHHHREDRDDDRDRDRDRERR HREKERDREERKAREREEREKEKERERARRREERDREERSRRREAAAEEEEEDVDRDRKR RRRSSHHHHHHRDAEPEGPASGAREEEVVDVEEAERRRQKKKEEEQKQLDEEMETRRRRI KEWQEMKRREEETKRREQEEAGVGTSAAAAAAPAEAEDGGNAGKKWTLDGEESDEEGNQE DGKKSDDNGGSGAGAMDVDVPNGGDNANGANAMDEDEIDPLDAFMNSMVLPEVAKLESMP AANVDDKNDKSAKDAVTNGDKKGPKKVMGRIIQGEDSDSDYADDEDDEGGSEDEDDEEFM KRVKKTKAEKLAIVDHSKIDYQPFRKNFYIEVKDITKMAAEEVAAYRKQLELKVHGKDVP KPIKTWVQSGLTSKLLDTIKKLGFEKPMSIQAQALPIIMSGRDCIGIAKTGSGKTLAFVL PMLRHVKDQPAVVPGDGPIGLIMAPTRELVVQIHSDIKKFSKALGINCVAIYGGSGVAQQ ISELKRGAEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIVQ NTRPDRQTVLFSATFPRQVEILARKVLTKPVEIQVGGRSVVNKDITQLVEVRPENERFFR LLELLGEWFDKGKILVFVHSQDKCDSLLKDLFQHGYPCLSLHGGKDQTDRESTLADFKSN VCSLLIATSVAARGLDVKELELVVNYDVPNHYEDYVHRVGRTGRAGRKGFAVTFISEEEE RYAPDLVKALELSEQAVPEDLKGLADRFMAKVKQGTEQAHGTGYGGSGFKFNEEEDEARK SAKKAQAREYGYEEDKSDSDSDEEGGVRKAGGDLAAQAIAAAQAAAAMVAAKAASNANQQ TQGTSVGPLLPLAIASNTQNNEATARALQAAFNIQQNLARIQAHAVPEHYEAELEINDFP QNARWKITHKETLGPIQEWTGAAITTRGTFFPQGKIVGANERKLYLFIEGPTELSVKKAK AELKRVLEDCANHALNLPGSAQTGKYSVI

Transcript Sequence

Transcript ID	Os08t0159900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:3514899:3518732:-1 gene:Os08g0159900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Pre-mRNA-processing ATP-dependent RNA helicase PRP5, RNA helicase 42 description:DEAD-like helicase, N-terminal domain containing protein. (Os08t0159900-01);Hypothetical conserved gene. (Os08t0159900-02)
Sequence	GCCTAGGGTTTCCTCCTCTCCAAGCTTCGCCGCCGCCCGCCGCCGCCGCCGACATGGGGT CTAGCGACGAGGCCGGCTCCTCCAAGCACCACCGCCGCGACAAGGAGAAGGACCGCGAGC GGTCCTCCTCCCGCCACCACCGCGACCGCGACCGCGAGAGATCCTCCTCTCGCCACCACC ACCGCGAGGACCGGGATGACGACCGGGATCGGGACCGGGACCGGGAGCGCCGCCACAGGG AGAAGGAGCGGGATCGCGAGGAGCGGAAGGCGCGGGAGCGGGAGGAGCGGGAGAAGGAGA AGGAGAGGGAGCGTGCGCGGCGGCGCGAGGAGAGGGACCGCGAGGAGAGGTCGAGGAGGC GGGAGGCGGCGGCGGAGGAGGAGGAGGAGGATGTGGACCGCGACCGCAAGCGCCGCCGCC GGTCGTCGCACCACCACCACCACCACCGCGACGCGGAGCCGGAGGGGCCGGCTTCGGGGG CCAGGGAGGAGGAGGTGGTGGATGTGGAGGAGGCCGAGAGGCGGCGCCAGAAGAAGAAGG AGGAGGAGCAGAAGCAGCTGGACGAAGAGATGGAGACGCGGCGCCGCCGCATCAAGGAGT GGCAGGAGATGAAGCGCCGCGAGGAGGAGACGAAGCGCCGCGAGCAGGAGGAGGCCGGAG TTGGCACCTCAGCCGCCGCCGCCGCGGCCCCCGCAGAAGCAGAAGATGGCGGCAATGCCG GGAAGAAGTGGACCTTGGATGGCGAGGAGTCTGATGAGGAGGGGAACCAAGAGGATGGTA AGAAATCCGATGATAATGGTGGTTCTGGTGCCGGTGCCATGGACGTTGATGTTCCAAATG GGGGTGATAATGCAAACGGCGCCAATGCTATGGATGAAGATGAGATTGATCCGCTTGATG CGTTCATGAACTCGATGGTATTGCCTGAGGTCGCAAAGCTTGAGAGCATGCCTGCTGCCA ATGTGGATGACAAGAATGATAAGAGTGCTAAGGATGCTGTGACTAATGGGGATAAAAAGG GGCCAAAGAAGGTGATGGGGAGAATTATACAAGGAGAAGACTCAGACTCGGATTATGCAG ATGACGAGGATGATGAGGGTGGTTCCGAAGATGAGGATGATGAGGAGTTCATGAAACGTG TCAAGAAGACAAAGGCAGAAAAGTTGGCTATTGTTGACCATTCTAAGATCGACTACCAGC CGTTCCGGAAGAATTTCTACATTGAGGTGAAGGATATTACAAAGATGGCAGCTGAGGAAG TGGCAGCTTATCGGAAGCAGTTGGAGCTCAAGGTGCATGGGAAAGATGTACCCAAGCCAA TAAAGACATGGGTGCAGAGTGGGCTTACCAGCAAGCTCCTTGATACAATCAAGAAACTTG GTTTCGAGAAACCGATGTCTATACAGGCACAAGCACTGCCGATCATAATGAGTGGGCGTG ATTGTATAGGAATTGCAAAGACTGGATCAGGCAAGACTCTAGCATTTGTCCTGCCTATGC TGAGGCATGTCAAAGATCAGCCGGCTGTTGTTCCTGGAGATGGCCCAATTGGGCTTATAA TGGCTCCTACTAGAGAGCTTGTGGTGCAGATACATTCAGACATTAAGAAGTTTTCGAAGG CGCTTGGCATCAACTGTGTTGCTATCTATGGAGGTTCTGGAGTTGCCCAGCAGATCAGTG AACTGAAGAGGGGTGCTGAAATTGTTGTTTGTACACCAGGCAGGATGATTGATATTCTTT GCACAAGCAGTGGGAAGATTACTAATCTTCGGAGAGTTACATTCTTGGTGATGGATGAAG CTGATAGGATGTTTGATATGGGTTTTGAGCCTCAGATTACTCGGATAGTTCAGAATACTC GTCCAGATAGGCAGACAGTTCTTTTCTCAGCCACTTTTCCACGTCAGGTGGAGATACTGG CCCGTAAGGTGCTGACAAAGCCTGTTGAGATCCAGGTGGGTGGGAGGAGTGTCGTCAACA AAGATATCACACAACTGGTTGAGGTGCGGCCAGAAAATGAGAGGTTCTTTAGGCTGTTGG AGCTGCTTGGAGAGTGGTTTGATAAAGGTAAAATTCTTGTTTTTGTCCATTCACAAGATA AATGTGATTCTCTACTCAAAGACCTGTTCCAGCATGGATATCCATGCCTATCCCTGCATG GTGGGAAAGACCAGACTGACCGTGAATCAACACTAGCTGATTTCAAGAGCAATGTGTGCA GCTTGCTGATTGCTACCAGTGTTGCTGCTAGGGGTTTAGATGTCAAGGAGCTTGAGCTTG TTGTGAATTATGATGTCCCGAACCACTATGAGGATTATGTTCATCGTGTTGGACGAACTG GACGTGCTGGGAGGAAGGGATTTGCCGTGACTTTTATTTCTGAGGAAGAGGAGCGTTATG CTCCAGACCTTGTTAAAGCTTTGGAGCTCTCAGAGCAGGCTGTTCCAGAGGACCTGAAAG GTCTAGCTGATCGTTTTATGGCAAAGGTGAAGCAGGGAACAGAGCAGGCCCATGGAACAG GATATGGTGGAAGCGGTTTCAAGTTCAATGAAGAGGAGGATGAAGCACGGAAATCTGCAA AGAAGGCTCAGGCAAGGGAATATGGTTATGAGGAGGACAAGTCAGATTCAGATTCTGATG AGGAAGGAGGGGTTCGTAAGGCGGGAGGTGACCTTGCGGCACAAGCTATTGCTGCTGCTC AAGCTGCTGCTGCTATGGTTGCAGCAAAGGCTGCTAGCAATGCCAACCAGCAAACACAAG GCACTTCTGTAGGGCCCTTGCTTCCTCTAGCCATTGCTTCAAACACACAGAATAACGAGG CCACAGCACGTGCACTGCAGGCTGCATTTAACATACAGCAAAATCTGGCAAGGATACAAG CACATGCAGTCCCAGAACATTATGAGGCTGAGCTTGAGATTAATGATTTCCCACAAAATG CCCGCTGGAAGATCACTCACAAAGAAACATTGGGTCCTATCCAGGAATGGACGGGTGCTG CAATCACTACAAGGGGAACCTTTTTTCCTCAAGGAAAAATTGTTGGTGCTAATGAACGCA AGCTGTACCTGTTCATAGAGGGCCCCACTGAGCTATCTGTCAAGAAGGCGAAAGCAGAAT TGAAGCGTGTCCTTGAAGATTGTGCCAACCATGCTCTGAACCTTCCTGGTTCTGCCCAAA CTGGAAAGTACTCTGTTATTTGAGGGGCGGAACAGATGTAGGGATTTTCTTGACAAGTGC AGCTTTCATGGGTTTGCAGACCACAGTGCTATTCTTGGATTGGTTCTTCCATATGCGCGG CTCATATTTTAAATCTTAGCTATCGTGCATGGCAGCTAATGCTTACTTTTAAACTTATTA TTGCATGATTATTGTGGAGATTGTCTAATCTAGAATGTTTTGACAATTTCTGTAGCTACT ATTAACAGTGGTGGTAGCTTGCTGTTAACACAGGATGTGTTCCAGGCAGTCTGTTGTGAA CACTGTTATGTGAACATAGCTCTCAAGCTATGTTACATTGTTCACCCCGAGCACTAATGG GGCATGCTAAATGCAAGAGAAGGTGCTGAGCTTTCTAGTGCAATTTTGGAAGTGCTTGTT GGCTTTTGATGCTATAAACCTAATAACTTGTCTTATATTCTTGCTTTGAATAAATCGGTG CGGTGGCACCATTTCAGTGAC