Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0159500-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:3460798:3463758:-1 gene:Os08g0159500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:zinc finger protein LSD1, LESION SIMULATING DISEASE1.1, LESION SIMULATING DISEASE 1.1 description:Similar to Zinc-finger protein Lsd1. (Os08t0159500-01);Similar to LOL1. (Os08t0159500-02)
Sequence	ATGCATCTTTCTGCAGGGTTTCTTTCATGTAGGGAAAGGAAAGGTGATTTCAGTTGCCTG ACTGCTGCCAGAATCTGCGAAGCATCTACAAGCGACGCCGTCGTTCAGGCAGCCGGCACG GCAATGCCGGTTCCCCTTGCTCCATACCCAACCCCGCCTGTGCCATTTACACCTCCCAAT GGGGCTCAAAGCCAGCTCGTGTGCTCTGGGTGCCGTAATCTGCTCATGTATCCAGCCGGA GCAACGTCGGTTTGCTGCGCAGTTTGCAGTACCGTGACTGCTGTGCCTGCTCCTGGAACC GAGATGGCGCAGTTAGTTTGCGGAGGATGCCACACTCTCCTGATGTATATACGCGGTGCG ACGAGTGTGCAATGTTCTTGCTGTCACACTGTCAACCTGGCTATGGAAGCAAATCAAGTT GCGCATGTAAACTGCGGGAACTGCCGTATGCTGCTCATGTACCAGTATGGCGCAAGGTCT GTCAAATGCGCAGTCTGCAATTTTGTGACATCAGTTGGGGCCTCACCTGGTACAGACCAG AAGCCCAGCAGCTGA

Peptide Sequence

PEP ID	Os08t0159500-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:3460798:3463758:-1 gene:Os08g0159500 transcript:Os08t0159500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:zinc finger protein LSD1, LESION SIMULATING DISEASE1.1, LESION SIMULATING DISEASE 1.1 description:Similar to Zinc-finger protein Lsd1. (Os08t0159500-01);Similar to LOL1. (Os08t0159500-02)
Sequence	MHLSAGFLSCRERKGDFSCLTAARICEASTSDAVVQAAGTAMPVPLAPYPTPPVPFTPPN GAQSQLVCSGCRNLLMYPAGATSVCCAVCSTVTAVPAPGTEMAQLVCGGCHTLLMYIRGA TSVQCSCCHTVNLAMEANQVAHVNCGNCRMLLMYQYGARSVKCAVCNFVTSVGASPGTDQ KPSS

Transcript Sequence

Transcript ID	Os08t0159500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:3460798:3463758:-1 gene:Os08g0159500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:zinc finger protein LSD1, LESION SIMULATING DISEASE1.1, LESION SIMULATING DISEASE 1.1 description:Similar to Zinc-finger protein Lsd1. (Os08t0159500-01);Similar to LOL1. (Os08t0159500-02)
Sequence	GTAAGAGAGAGGAGATAGAGAGAGCTGTACTAACTGATGAACTGCTCTCATGCAAGCCAG ATTACCATAAAGATTGGGTCATAAGCACTGTTGTTAGGTTATCAATGGGAAATAGTTTTC ATGGACGTTATTGGCCGTGAATCCCAAGTGGTGTGGCTAATCTCTCCAAACTAATAAAAG TTCATAATCTGAACACAAGATTTGATGAGAGATTCAACCAAGAAGCTGAAATTTTTTGCA CCTGATGTGCATTGCTGAACCAATTTTCTGTTGCATAAAGAGTCCTGAAACTTCATGTTG CAAACTGAAGCGTGATGTTCTAACATTTTTCCATTGGAGCTTTCACTGGTTTCTTCAGAA CTGAAATCTTTCTTGCTTTCTCATCAGCTTCTCATGCATCTTTCTGCAGGGTTTCTTTCA TGTAGGGAAAGGAAAGGTGATTTCAGTTGCCTGACTGCTGCCAGAATCTGCGAAGCATCT ACAAGCGACGCCGTCGTTCAGGCAGCCGGCACGGCAATGCCGGTTCCCCTTGCTCCATAC CCAACCCCGCCTGTGCCATTTACACCTCCCAATGGGGCTCAAAGCCAGCTCGTGTGCTCT GGGTGCCGTAATCTGCTCATGTATCCAGCCGGAGCAACGTCGGTTTGCTGCGCAGTTTGC AGTACCGTGACTGCTGTGCCTGCTCCTGGAACCGAGATGGCGCAGTTAGTTTGCGGAGGA TGCCACACTCTCCTGATGTATATACGCGGTGCGACGAGTGTGCAATGTTCTTGCTGTCAC ACTGTCAACCTGGCTATGGAAGCAAATCAAGTTGCGCATGTAAACTGCGGGAACTGCCGT ATGCTGCTCATGTACCAGTATGGCGCAAGGTCTGTCAAATGCGCAGTCTGCAATTTTGTG ACATCAGTTGGGGCCTCACCTGGTACAGACCAGAAGCCCAGCAGCTGAACTGCTGAAGTG CCATAAATATTCAGAAAAGAGCTTCTCAAACCGATGCTTTGAGTGCACATGTATAGAGTT CTTCCCTGAAGCATTTTTTTTCTTCCTTTTTTATCTCCCTTTCCCCCCAATTTCCACCTT CCTTCCTTGGATATGGAGAGAGCCTGCGGAATAAATGAGAGTTTTGCTAAATACCTAGTG CTCAAAATTCGTCGAATCGTCTGTATGACCGAACAAGATTGACATATTATATACATAAAC CTATGATAATATTTATGC