Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0159000-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:3438448:3441867:1 gene:Os08g0159000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to DnaJ homolog subfamily C member 1. (Os08t0159000-01)
Sequence	ATGGAGTTCATCGACGACGACTGGGACTACCAGCCACGCGCGCGAGTCATCCACTCCCGC AGCAACGCTAACTCCAACGGTGCCACCACCGCCTCGTCGTCCCAACCGACCCGCTCCCTC CCCCACACCGCCGCCTGCGCCGCCGCGGCCGTGGCGCTCCTCGCCGCGGCGTACTACCTC CTCCCGGACTACCAGGTCCTCGCATCCGTCGTCGTCTGGGTCGCGTCCTCCCTCCTCCTC GCCCCCTTCGCGCCCTCCTCCGCCACCGGCGGCGACGTCTCCGTCGGCCGCGGGGATCCC CTCCCCGAGCAGGAGCCCGTCGAGGAACCCGTCTCGGATCCCGCCCCCACCTCCCGCCGC GGTCGGCGCCAGAGCTCGAGCTCGAACCCGACGCCTCCGCCCCCGAAGCCCTCAGATCCG ATCGCGCCTCCGCCGCCGCGACACGCGGCGGCTGCGGCTGCGGCTGCGGCGACGGCCGTG TCGGATGGCGGCGAGGCGGTGGAGGACGCCGGCGAGTGGACCGACCAAGAGATGGACATC CTCCGCCGCCAGATGGTGAAGCACCCGGCGGGTGAGCCGCAGCGGTGGGAGAAGATTGCC GCGGCGTTCGGCGGCCGCCGCACGCCGGAGAGCGTAATCCGCGCGGCGAAGTCCGGCGGC GGCGCTGCTGCCGCGGGGGCCTCGTTCGACCAGTTCCTCCGCAAGCGCAAGCCGCTCGAC CCGAGGTCCGAGGCGACCGACGCAGGAAGTGGCAATGCCGGAGGAGGAGGAGGGGAGAGT GGTGATGGGTCTTGGAGCGCCGGCGATGACCGGGCATTGCTCAACGCGCTCAAGGAGTTC CCCAAGGACACGGCGATGAGGTGGGAGAAGGTGGCGGTGGCGGTGCCCGGGAAGACGAAG GCAGCTTGCATGAAGAGGGTCACCGAGCTCAAGCGCGATTTCCGGAGCAGCAAGGCAGCA TCGGAGGCAGCTCCATAG

Peptide Sequence

PEP ID	Os08t0159000-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:3438448:3441867:1 gene:Os08g0159000 transcript:Os08t0159000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to DnaJ homolog subfamily C member 1. (Os08t0159000-01)
Sequence	MEFIDDDWDYQPRARVIHSRSNANSNGATTASSSQPTRSLPHTAACAAAAVALLAAAYYL LPDYQVLASVVVWVASSLLLAPFAPSSATGGDVSVGRGDPLPEQEPVEEPVSDPAPTSRR GRRQSSSSNPTPPPPKPSDPIAPPPPRHAAAAAAAAATAVSDGGEAVEDAGEWTDQEMDI LRRQMVKHPAGEPQRWEKIAAAFGGRRTPESVIRAAKSGGGAAAAGASFDQFLRKRKPLD PRSEATDAGSGNAGGGGGESGDGSWSAGDDRALLNALKEFPKDTAMRWEKVAVAVPGKTK AACMKRVTELKRDFRSSKAASEAAP

Transcript Sequence

Transcript ID	Os08t0159000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:3438448:3441867:1 gene:Os08g0159000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to DnaJ homolog subfamily C member 1. (Os08t0159000-01)
Sequence	GGCTACTCCACGCATCTCCACTCCTCTTGCATCTCCGGCGAGTTCTCTCCGGCGAGCTCC CTCGCCGCCGGCGATGGAGTTCATCGACGACGACTGGGACTACCAGCCACGCGCGCGAGT CATCCACTCCCGCAGCAACGCTAACTCCAACGGTGCCACCACCGCCTCGTCGTCCCAACC GACCCGCTCCCTCCCCCACACCGCCGCCTGCGCCGCCGCGGCCGTGGCGCTCCTCGCCGC GGCGTACTACCTCCTCCCGGACTACCAGGTCCTCGCATCCGTCGTCGTCTGGGTCGCGTC CTCCCTCCTCCTCGCCCCCTTCGCGCCCTCCTCCGCCACCGGCGGCGACGTCTCCGTCGG CCGCGGGGATCCCCTCCCCGAGCAGGAGCCCGTCGAGGAACCCGTCTCGGATCCCGCCCC CACCTCCCGCCGCGGTCGGCGCCAGAGCTCGAGCTCGAACCCGACGCCTCCGCCCCCGAA GCCCTCAGATCCGATCGCGCCTCCGCCGCCGCGACACGCGGCGGCTGCGGCTGCGGCTGC GGCGACGGCCGTGTCGGATGGCGGCGAGGCGGTGGAGGACGCCGGCGAGTGGACCGACCA AGAGATGGACATCCTCCGCCGCCAGATGGTGAAGCACCCGGCGGGTGAGCCGCAGCGGTG GGAGAAGATTGCCGCGGCGTTCGGCGGCCGCCGCACGCCGGAGAGCGTAATCCGCGCGGC GAAGTCCGGCGGCGGCGCTGCTGCCGCGGGGGCCTCGTTCGACCAGTTCCTCCGCAAGCG CAAGCCGCTCGACCCGAGGTCCGAGGCGACCGACGCAGGAAGTGGCAATGCCGGAGGAGG AGGAGGGGAGAGTGGTGATGGGTCTTGGAGCGCCGGCGATGACCGGGCATTGCTCAACGC GCTCAAGGAGTTCCCCAAGGACACGGCGATGAGGTGGGAGAAGGTGGCGGTGGCGGTGCC CGGGAAGACGAAGGCAGCTTGCATGAAGAGGGTCACCGAGCTCAAGCGCGATTTCCGGAG CAGCAAGGCAGCATCGGAGGCAGCTCCATAGCTGCAAATGCTACCTAGTTGCCTGCAATT CTTCTTTGAGAGTAAGGTTTTAGACAGAGATTTACCATGATGAAACGAGAAACGAAAAGC CATTTGCTCCGGGGTGATGCCAAATGAAGGAGACAACTGAATTATAGAACAGATGGTGTA CTTTTATTGTTTTGAGAAAGGTCAGGAAAAAAATCCTTGATACATGAAGATACTGGGACA CACGAAAACAAACAGATTGCCAGATTGTAAAAGAAATTGTAGCCCCTTGTTTGGTTGTAG TGTCACTCAAGCCTCCATCCAACATGTGTTAACATTACGTGACTGTTTCTGCTCATCTTT TGATAGGGCTAATACGATACACACTGTTCTCTTC