Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0158200-02
CDS Infomation	cds chromosome:IRGSP-1.0:8:3408278:3409968:-1 gene:Os08g0158200 gene_biotype:protein_coding transcript_biotype:protein_coding description:FAD linked oxidase, N-terminal domain containing protein. (Os08t0158200-02)
Sequence	ATGAGTCCCACCATTTCACCTGTCCTGGTTTTCCTCCTCCTATCACTTCATCAGAGCATA TGCTCCAGTGCTCATGATGCTGCAAGTGCAAGCAGCTTCTCCTCCTGCCTTGCCACCCAT GGTGTCAGCAACTTCTCCCTCCCTGCATCACCAAGCTACAATACCACCCTCAACTTCTCC ATCAGAAATCTCCGGTTCACGCTCCCCGATGTCACCAGGCCGGCAGCCATCGTCCTTCCC TGGTCAAAGGAGGATCTCCGGCGAGCCATACTATGTGCACGCAACAGTTCGCTGGCGATC CGTGTACGCAGCGGCGGGCACAGCTACGAGGGCTTGTCATACACCACGGAGAACCATGTC CCCTTCGTTGTGATCGACCTCATGAACCTGAACCGTGTCCAGGTTGACTCGGTCTCGGCC ACAGCCTGGGCCGAGGCCGGTGCGACTCTAGGTGAGCTCTACTACGCCGTGGGACGGTCG AGCCAGTCCTTGGCCTTCTCAGGCGGGTCGTGTTCCACCATCGGCTTAGGTGGTGTCATC TCCGGTGGCGGCTTTGGGTTGCTGTCACGGAAATTTGGGCTCGCCGCTGATAACGTATTG GATGCGGTGCTCGTTGACCCGAATGGAAGAGTCCTTGACCGGAATTCGATGGGCGAAGAC ATCTTTTGGGCAATTTGCGGTGGCGGTGGCGGGAGCTGGGGTGTGGTGTATGCTTGGAAG CTCCGGCTCGTGCCGGTTCCTCACAACGTCACCGTATTCATCGTTGACCGTACTGGACCG GTCGAGTACGTAGCTGGGTTGGTTCATTGGTGGCAGCATGTAGGGCCCAATCTACCTGAC GAGTTCTATCTCTCAGTGTATTTTCCTACTGGATCATCAGATGGTAATGTCTCTGTCTCA TTTGAGGGCCAGGTTTTAGGAACAAAACAACAAACCCTGTCAGTGTTGAGCCAAAGCTTT CCAATGTTAGGTGTCACTGAGTCTGACCTAAGTGAGATGAGTTGGGTCGAGTCAACAGCC AAGTTCGCCAATGTTGGCACAGTCTCTGACCTATCGAATCGGTCGCCTGGAACAAACTCA TACACTAAGAGTAAGTCTGATTATGTGAAGGCACCAATCTCGAGGCATGACATGGTTGAG ATCGCCCGATACCTATCAGCTGGACCACCAGGGTCCATCATACTTGACCCTTATGGAGGT GCCATGGCTCGAATCGGGAGTGACGCGACACCATTCCCACATCGAGCTGGCATCCTCTAC AGTATTCAGTATACTGTATATTGGGGACAATCGGATCAAGCTAGGGCTAATGAGTACATC ATATGGCTCCGATCGTTGTACACATACATGACCCCCCATGTGTCAAAGGATCCCCGTGGT GCGTATGTCAACTACCTAGATCTAGACTTGGGCGCCAACAACTGGACGCACCCCATAGGT GGATCATCTATGGAAGCAGTGGCGCGTGCGAGATCTTCTTGGGGTGCAGCATATTTTGGG AACAATTTCAATCGGTTGGTCAGCACCAAGACGACAATTGATCCAAGCAATGTGTTCAAT AACGCTCAAAGCATTCCCCCTTTGAATTAG

Peptide Sequence

PEP ID	Os08t0158200-02
PEP Infomation	pep chromosome:IRGSP-1.0:8:3408278:3409968:-1 gene:Os08g0158200 transcript:Os08t0158200-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:FAD linked oxidase, N-terminal domain containing protein. (Os08t0158200-02)
Sequence	MSPTISPVLVFLLLSLHQSICSSAHDAASASSFSSCLATHGVSNFSLPASPSYNTTLNFS IRNLRFTLPDVTRPAAIVLPWSKEDLRRAILCARNSSLAIRVRSGGHSYEGLSYTTENHV PFVVIDLMNLNRVQVDSVSATAWAEAGATLGELYYAVGRSSQSLAFSGGSCSTIGLGGVI SGGGFGLLSRKFGLAADNVLDAVLVDPNGRVLDRNSMGEDIFWAICGGGGGSWGVVYAWK LRLVPVPHNVTVFIVDRTGPVEYVAGLVHWWQHVGPNLPDEFYLSVYFPTGSSDGNVSVS FEGQVLGTKQQTLSVLSQSFPMLGVTESDLSEMSWVESTAKFANVGTVSDLSNRSPGTNS YTKSKSDYVKAPISRHDMVEIARYLSAGPPGSIILDPYGGAMARIGSDATPFPHRAGILY SIQYTVYWGQSDQARANEYIIWLRSLYTYMTPHVSKDPRGAYVNYLDLDLGANNWTHPIG GSSMEAVARARSSWGAAYFGNNFNRLVSTKTTIDPSNVFNNAQSIPPLN

Transcript Sequence

Transcript ID	Os08t0158200-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:3408278:3409968:-1 gene:Os08g0158200 gene_biotype:protein_coding transcript_biotype:protein_coding description:FAD linked oxidase, N-terminal domain containing protein. (Os08t0158200-02)
Sequence	AACCTATCTCTCATGAAGTCATGAGTCCCACCATTTCACCTGTCCTGGTTTTCCTCCTCC TATCACTTCATCAGAGCATATGCTCCAGTGCTCATGATGCTGCAAGTGCAAGCAGCTTCT CCTCCTGCCTTGCCACCCATGGTGTCAGCAACTTCTCCCTCCCTGCATCACCAAGCTACA ATACCACCCTCAACTTCTCCATCAGAAATCTCCGGTTCACGCTCCCCGATGTCACCAGGC CGGCAGCCATCGTCCTTCCCTGGTCAAAGGAGGATCTCCGGCGAGCCATACTATGTGCAC GCAACAGTTCGCTGGCGATCCGTGTACGCAGCGGCGGGCACAGCTACGAGGGCTTGTCAT ACACCACGGAGAACCATGTCCCCTTCGTTGTGATCGACCTCATGAACCTGAACCGTGTCC AGGTTGACTCGGTCTCGGCCACAGCCTGGGCCGAGGCCGGTGCGACTCTAGGTGAGCTCT ACTACGCCGTGGGACGGTCGAGCCAGTCCTTGGCCTTCTCAGGCGGGTCGTGTTCCACCA TCGGCTTAGGTGGTGTCATCTCCGGTGGCGGCTTTGGGTTGCTGTCACGGAAATTTGGGC TCGCCGCTGATAACGTATTGGATGCGGTGCTCGTTGACCCGAATGGAAGAGTCCTTGACC GGAATTCGATGGGCGAAGACATCTTTTGGGCAATTTGCGGTGGCGGTGGCGGGAGCTGGG GTGTGGTGTATGCTTGGAAGCTCCGGCTCGTGCCGGTTCCTCACAACGTCACCGTATTCA TCGTTGACCGTACTGGACCGGTCGAGTACGTAGCTGGGTTGGTTCATTGGTGGCAGCATG TAGGGCCCAATCTACCTGACGAGTTCTATCTCTCAGTGTATTTTCCTACTGGATCATCAG ATGGTAATGTCTCTGTCTCATTTGAGGGCCAGGTTTTAGGAACAAAACAACAAACCCTGT CAGTGTTGAGCCAAAGCTTTCCAATGTTAGGTGTCACTGAGTCTGACCTAAGTGAGATGA GTTGGGTCGAGTCAACAGCCAAGTTCGCCAATGTTGGCACAGTCTCTGACCTATCGAATC GGTCGCCTGGAACAAACTCATACACTAAGAGTAAGTCTGATTATGTGAAGGCACCAATCT CGAGGCATGACATGGTTGAGATCGCCCGATACCTATCAGCTGGACCACCAGGGTCCATCA TACTTGACCCTTATGGAGGTGCCATGGCTCGAATCGGGAGTGACGCGACACCATTCCCAC ATCGAGCTGGCATCCTCTACAGTATTCAGTATACTGTATATTGGGGACAATCGGATCAAG CTAGGGCTAATGAGTACATCATATGGCTCCGATCGTTGTACACATACATGACCCCCCATG TGTCAAAGGATCCCCGTGGTGCGTATGTCAACTACCTAGATCTAGACTTGGGCGCCAACA ACTGGACGCACCCCATAGGTGGATCATCTATGGAAGCAGTGGCGCGTGCGAGATCTTCTT GGGGTGCAGCATATTTTGGGAACAATTTCAATCGGTTGGTCAGCACCAAGACGACAATTG ATCCAAGCAATGTGTTCAATAACGCTCAAAGCATTCCCCCTTTGAATTAGTTCTAGTGAA AATGTCAAATAGAAATGAAACTGGCTGTGTTCGGCAGCAATGGATTGGGAGAATAACTGC TATGTTTTTTT