Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0157800-01
CDS Infomation

cds chromosome:IRGSP-1.0:8:3382539:3387003:-1 gene:Os08g0157800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os08t0157800-01)
Sequence

ATGACCTCCTCCTCCACCGCCGCCGCCGCCATTCAATCCGCCTCGTCCTCCACCCTCTCC
CCGCACGCGGCTCCCTTCGCCCTCCCCGTCCGCCCGGCCCGCGCCCCTCTCCAAGATGGT
GATGTTTCTAGGTCGATGGATGGTAGCATTGTGGTGCATGGATTAGATAATAAAATTTTA
GGAGATGCTCATCCATCATCGTCGTCAGCAACATCTTGCTTTCGAACACAATCATTTGAC
ACAGTTTTACCAGCCTCCACATGTGGAGCGAACGCAAGTCAGCCGAGGGAATGGCCAGAA
ATTGGCAGCGATGCAGCTTATCCATCCTCGATTTGTTCTACTTCTGTGGTATTTTCATAT
CCTTCAGTCATGATGGCCTCCAATCATAACCAGAAAAATCCCTTGTACCCTGGGATGGGA
AGTAATGGAAGCAGATGTTCAACAGTCAAGATAGAAAGCCCACCAAATAAAATATCTGAA
GCCAATAAAATCAGTTGTGGTTTAACGAGCAAGTCATCTATGACAAAAGATGTTAGTAAA
TCCAACGAAGATGCTGTGAAAAATGCCCCCTTTCCACAAATTTTGGAAGTTGGTATGGAG
ATCTGCTCCAAAGAGGCAAGCCCTGTCTCCCATACGAGGCCTCTTCATATTTCAACTGCT
GGCTCTGATCCATGCGATTCTATGGCTGATGGTGTGAAAACAGAACCATCAGAATGCTAT
GTGGATTCACCATGTTGGAGAGGAAGAGGAACTTCACTTTCTCATCAAACGTCAGTGACA
CAGTTAATAAATCAAGAATCAGAGGCTTTTGATGCTGGCCAAAAGAAGAGCACTAGCACT
GTTCAGCATTGTGAGGTTCTGACCGCATCTCAAAATTTGGACACTATCGAGAATAAGCAA
AACCAATCCCAATCTCATGTTGAATTGTCTGTGTCTATGAAATCTGGAGACAATGGTAAA
AAAGAGGAAGAAGTTTCCCACAATAAGGAGCTTGAGAGTGCAAAACAATGTGCAGCAAAA
TGCACCGCAGAGCAGAAACACAGTTTGGAGCTGAGAGATAATAGCGTGAAGCGATCTGGT
CTAAACTTTGCTGCTCCTGATTTTATCCCTTCATCAGTTGGGAAATCAAAAATTGTCAAA
GGGTCCTGTTCCACGACAGGAAGGAACACTTCTGGAATTCTCAAGGCAATGGGGAATTTG
TCAGAAATGCTTCGCGATAGCTGTTTGTTGGATGAAAATGAGCTCGATGAGCATGAGCAC
ACTCTCCTCCAATCAGTAATTGAGAATCTTCAGACATGTATTGATAGGAAAAAAAAGGGT
CCCATTAATGATGATGGCTCTAACAAGGCAGGACTAAGGGCTCCTCATTCTCAGTCCGCC
GTTTTAAAATCTTATGCAGGGGACTACAGAGGTAGTTGTACAACCAATGGTGGAAATGGC
ATAACTGTAAATAAATCTGTGGGTCCTACTCGTGTGCTCAGTGATTTTGGGAAGAACAGC
TTGACATGGTCCCAGCCTTCATTCAACAATATTCCAAGGATGATATCCTGTGAAGAAGAC
CACTCACAGATTCTCATTTATAAGAATCTGTGGATTGATGCTGAGCGTACAAATTGTGAG
TTGAAGTATCTACTGAAACAGAACCGTATCAAAATTGGCCAAGAATCCAGTATGGCTCAT
ATTGGTGGTCCAAGAAATCCTTCTTTCCAGGCATGTGATTTAGGTGCAGGTCCAAGTAAT
TCTTATGGAGCTGCCATATCTTACCCACCAACTCTGAGTTTTCCTAAGGGTGATTCTACT
GAAGAGACATCAAGAGCAAGGAACACTGACCTCCTTTACACTGGTGATTGCATCCGGTTA
GGAGATAACAGTGTGCCTAGCTGCTCTGCAAGCACCATCAGCCATCCTACTCGACCGAAT
AATTTTCAGGGTGACCTTTTAACAGGCTTGGAGGAAACTGGCTTGCATCATCATGCTCAG
CCAGTACCGCAACTCGCACCGAGCAGAGTTCACAGGGAACCGAGAATAAGCACTATGGAT
GAAGCGTCAGGCCACTCATGCTTCACCGGAGCAGACGGCATTTTGAGTGGCAATTCTGAA
TATGGCTTGTCATCAGATTGGGAGCATGTTCTGAAGGAAGAAATCGGCTGGAGCTGA

Peptide Sequence

PEP ID

Os08t0157800-01
PEP Infomation

pep chromosome:IRGSP-1.0:8:3382539:3387003:-1 gene:Os08g0157800 transcript:Os08t0157800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os08t0157800-01)
Sequence

MTSSSTAAAAIQSASSSTLSPHAAPFALPVRPARAPLQDGDVSRSMDGSIVVHGLDNKIL
GDAHPSSSSATSCFRTQSFDTVLPASTCGANASQPREWPEIGSDAAYPSSICSTSVVFSY
PSVMMASNHNQKNPLYPGMGSNGSRCSTVKIESPPNKISEANKISCGLTSKSSMTKDVSK
SNEDAVKNAPFPQILEVGMEICSKEASPVSHTRPLHISTAGSDPCDSMADGVKTEPSECY
VDSPCWRGRGTSLSHQTSVTQLINQESEAFDAGQKKSTSTVQHCEVLTASQNLDTIENKQ
NQSQSHVELSVSMKSGDNGKKEEEVSHNKELESAKQCAAKCTAEQKHSLELRDNSVKRSG
LNFAAPDFIPSSVGKSKIVKGSCSTTGRNTSGILKAMGNLSEMLRDSCLLDENELDEHEH
TLLQSVIENLQTCIDRKKKGPINDDGSNKAGLRAPHSQSAVLKSYAGDYRGSCTTNGGNG
ITVNKSVGPTRVLSDFGKNSLTWSQPSFNNIPRMISCEEDHSQILIYKNLWIDAERTNCE
LKYLLKQNRIKIGQESSMAHIGGPRNPSFQACDLGAGPSNSYGAAISYPPTLSFPKGDST
EETSRARNTDLLYTGDCIRLGDNSVPSCSASTISHPTRPNNFQGDLLTGLEETGLHHHAQ
PVPQLAPSRVHREPRISTMDEASGHSCFTGADGILSGNSEYGLSSDWEHVLKEEIGWS

Transcript Sequence

Transcript ID

Os08t0157800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:3382539:3387003:-1 gene:Os08g0157800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os08t0157800-01)
Sequence

CTCGTTATTTACGACTCTTGCCACTCTCCGCCGCCCCACCAAACCCCACCGGCGACCTCA
CCGGAGATGACCTCCTCCTCCACCGCCGCCGCCGCCATTCAATCCGCCTCGTCCTCCACC
CTCTCCCCGCACGCGGCTCCCTTCGCCCTCCCCGTCCGCCCGGCCCGCGCCCCTCTCCAA
GATGGTGATGTTTCTAGGTCGATGGATGGTAGCATTGTGGTGCATGGATTAGATAATAAA
ATTTTAGGAGATGCTCATCCATCATCGTCGTCAGCAACATCTTGCTTTCGAACACAATCA
TTTGACACAGTTTTACCAGCCTCCACATGTGGAGCGAACGCAAGTCAGCCGAGGGAATGG
CCAGAAATTGGCAGCGATGCAGCTTATCCATCCTCGATTTGTTCTACTTCTGTGGTATTT
TCATATCCTTCAGTCATGATGGCCTCCAATCATAACCAGAAAAATCCCTTGTACCCTGGG
ATGGGAAGTAATGGAAGCAGATGTTCAACAGTCAAGATAGAAAGCCCACCAAATAAAATA
TCTGAAGCCAATAAAATCAGTTGTGGTTTAACGAGCAAGTCATCTATGACAAAAGATGTT
AGTAAATCCAACGAAGATGCTGTGAAAAATGCCCCCTTTCCACAAATTTTGGAAGTTGGT
ATGGAGATCTGCTCCAAAGAGGCAAGCCCTGTCTCCCATACGAGGCCTCTTCATATTTCA
ACTGCTGGCTCTGATCCATGCGATTCTATGGCTGATGGTGTGAAAACAGAACCATCAGAA
TGCTATGTGGATTCACCATGTTGGAGAGGAAGAGGAACTTCACTTTCTCATCAAACGTCA
GTGACACAGTTAATAAATCAAGAATCAGAGGCTTTTGATGCTGGCCAAAAGAAGAGCACT
AGCACTGTTCAGCATTGTGAGGTTCTGACCGCATCTCAAAATTTGGACACTATCGAGAAT
AAGCAAAACCAATCCCAATCTCATGTTGAATTGTCTGTGTCTATGAAATCTGGAGACAAT
GGTAAAAAAGAGGAAGAAGTTTCCCACAATAAGGAGCTTGAGAGTGCAAAACAATGTGCA
GCAAAATGCACCGCAGAGCAGAAACACAGTTTGGAGCTGAGAGATAATAGCGTGAAGCGA
TCTGGTCTAAACTTTGCTGCTCCTGATTTTATCCCTTCATCAGTTGGGAAATCAAAAATT
GTCAAAGGGTCCTGTTCCACGACAGGAAGGAACACTTCTGGAATTCTCAAGGCAATGGGG
AATTTGTCAGAAATGCTTCGCGATAGCTGTTTGTTGGATGAAAATGAGCTCGATGAGCAT
GAGCACACTCTCCTCCAATCAGTAATTGAGAATCTTCAGACATGTATTGATAGGAAAAAA
AAGGGTCCCATTAATGATGATGGCTCTAACAAGGCAGGACTAAGGGCTCCTCATTCTCAG
TCCGCCGTTTTAAAATCTTATGCAGGGGACTACAGAGGTAGTTGTACAACCAATGGTGGA
AATGGCATAACTGTAAATAAATCTGTGGGTCCTACTCGTGTGCTCAGTGATTTTGGGAAG
AACAGCTTGACATGGTCCCAGCCTTCATTCAACAATATTCCAAGGATGATATCCTGTGAA
GAAGACCACTCACAGATTCTCATTTATAAGAATCTGTGGATTGATGCTGAGCGTACAAAT
TGTGAGTTGAAGTATCTACTGAAACAGAACCGTATCAAAATTGGCCAAGAATCCAGTATG
GCTCATATTGGTGGTCCAAGAAATCCTTCTTTCCAGGCATGTGATTTAGGTGCAGGTCCA
AGTAATTCTTATGGAGCTGCCATATCTTACCCACCAACTCTGAGTTTTCCTAAGGGTGAT
TCTACTGAAGAGACATCAAGAGCAAGGAACACTGACCTCCTTTACACTGGTGATTGCATC
CGGTTAGGAGATAACAGTGTGCCTAGCTGCTCTGCAAGCACCATCAGCCATCCTACTCGA
CCGAATAATTTTCAGGGTGACCTTTTAACAGGCTTGGAGGAAACTGGCTTGCATCATCAT
GCTCAGCCAGTACCGCAACTCGCACCGAGCAGAGTTCACAGGGAACCGAGAATAAGCACT
ATGGATGAAGCGTCAGGCCACTCATGCTTCACCGGAGCAGACGGCATTTTGAGTGGCAAT
TCTGAATATGGCTTGTCATCAGATTGGGAGCATGTTCTGAAGGAAGAAATCGGCTGGAGC
TGAAGGGATCTGCCAGCCAGATTGCTACTTAATTTGTACATATATATATGCTTGAGTAAT
TAGAGATGCAGGAATTCTGCTCATGGGTTTATTTTGAGTTTTTTTGTCTGATAAGGCTGA
GGATAGCAGGCACTGCTTGGCAAAATGGTGCTTTCCAGCCTCTGAAAAAACAGCACCACT
TTTATGTATGCATGTCTAATTAGCTTCTTATGAACAATTGTATAAGAACTCCTAAGTCCT
AACCTAGCTGCACATTTTGGCCATGGCAGTGCCAAATTGTCAC