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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0157400-01
CDS Infomation

cds chromosome:IRGSP-1.0:8:3326359:3327581:-1 gene:Os08g0157400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os08t0157400-01)
Sequence

ATGGGGTTCCCGTCGGTGTGCTACTGCGTGATACTGCCGCAGCCGCTGGTGCTGGTGCTG
CAGCTGCTCGACCTGCTGCGCCACGCCTTCCTGCTCTGCCTCTCCGCGCTCGGCCTCGCC
GCGCCGCCGCTCCCGGACGAACACCCCGCCTACGCGCCGCCTCCGCCGCCGCCGGCGTCG
ATGGCGGCCCTCCCCGCCGACCTCGTCTGGGCGTTCCAGCCCGCGCCGGAGCCGGCCGCC
ATCAAGGCGCGCCTCCCCGCCGTCCGCTACGCCGACTTCGTCAGGTGCCGCCGCGCCGCC
GCGGCGGCCGCGGCGTCGTGCGTCGTGTGCCTCGGCGCGCTCGAGGCGCGTCACCGGGTG
CGCGAGCTCGGCAACTGCGCGCACGCGTTCCACAAGGCGTGCATCGACAAGTGGGTCGAC
AAGGGCCAGGCCACCTGCCCGCTCTGCCGCGCCGCCCTCCTCCCCTCCGCCGACGACGCC
GACGCCGCCGCCATCGCCGCCACCACCAGGCACCACCTCCCCTCCTTCTGA

Peptide Sequence

PEP ID

Os08t0157400-01
PEP Infomation

pep chromosome:IRGSP-1.0:8:3326359:3327581:-1 gene:Os08g0157400 transcript:Os08t0157400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os08t0157400-01)
Sequence

MGFPSVCYCVILPQPLVLVLQLLDLLRHAFLLCLSALGLAAPPLPDEHPAYAPPPPPPAS
MAALPADLVWAFQPAPEPAAIKARLPAVRYADFVRCRRAAAAAAASCVVCLGALEARHRV
RELGNCAHAFHKACIDKWVDKGQATCPLCRAALLPSADDADAAAIAATTRHHLPSF

Transcript Sequence

Transcript ID

Os08t0157400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:3326359:3327581:-1 gene:Os08g0157400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os08t0157400-01)
Sequence

CTCTCTCTCTCTCTCTCTCTCTCTAAAGATTCCATCTTTGATTTCGTTTCTCTCTCTAGA
AGGAAGGAAGGAGGTCGCCGGCGGCGATGGGGTTCCCGTCGGTGTGCTACTGCGTGATAC
TGCCGCAGCCGCTGGTGCTGGTGCTGCAGCTGCTCGACCTGCTGCGCCACGCCTTCCTGC
TCTGCCTCTCCGCGCTCGGCCTCGCCGCGCCGCCGCTCCCGGACGAACACCCCGCCTACG
CGCCGCCTCCGCCGCCGCCGGCGTCGATGGCGGCCCTCCCCGCCGACCTCGTCTGGGCGT
TCCAGCCCGCGCCGGAGCCGGCCGCCATCAAGGCGCGCCTCCCCGCCGTCCGCTACGCCG
ACTTCGTCAGGTGCCGCCGCGCCGCCGCGGCGGCCGCGGCGTCGTGCGTCGTGTGCCTCG
GCGCGCTCGAGGCGCGTCACCGGGTGCGCGAGCTCGGCAACTGCGCGCACGCGTTCCACA
AGGCGTGCATCGACAAGTGGGTCGACAAGGGCCAGGCCACCTGCCCGCTCTGCCGCGCCG
CCCTCCTCCCCTCCGCCGACGACGCCGACGCCGCCGCCATCGCCGCCACCACCAGGCACC
ACCTCCCCTCCTTCTGATCCATGTCGCCAAGAACCCATCTTGCTTAGCACCCAACACCCC
CTTCCACCCCAAGAGCAACAAGGGTTCCCTCCTCCTTTCTCCACCAATGGATCAAATCCA
ATCAAAATGGAAGAACACACAACACAAGAGAAGAGAGATAGAGAGAGAAATCAATGGAGG
AAGAAGATGAGAGGAGAGAGAGGGGGTGTGTGTGGTGGAGGAGTATTATTGGTAGGTGAG
GCACTAATTATGAGGAGGACAAGGATGGCTACCTGCACTGCATTGGATCTGGTGAATTTC
AGCCCTAGCTAGCTATAGATCCAACATCTCCTCTCTTCCCTTCTCTTCTCTTCTCTTCAC
TTCACTTCACATCAACTTTTTCTTTGCTTTTCTTTTTTCTACTTTACTTTCTTCTTTTGT
TGCCTTCACCTCCTTTTTGAAATTTTGCTTTCTTTCTCTTTAATTTTTCTCCCTCTTTTT
CCTTCTTTTTTTTGAGGGTTTCCTCTCCCCTTGTCATTAACTTAATTTGTAAGGGGGGAT
TAAGAGAGAGAGATGTGTACATACCTGCCTCCACTTTGACAAATATTGGAATAATAATTT
ATAATGATGATGATGATGATGAT