Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0156900-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:3301039:3304257:-1 gene:Os08g0156900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TOPOISOMERASE 6 SUBUNIT A2 description:Spo11/DNA topoisomerase VI, subunit A family protein. (Os08t0156900-01);Similar to Topoisomerase 6 subunit A. (Os08t0156900-02)
Sequence	ATGGCGGAGGCGGGAGTGGCGGCCGCCTCGCTCTTCGGCGCCGACCGCCGCCTCTGCTCC GCCGACATCCTCCCTCCCGCCGAGGTGCGGGCGAGGATCGAGGTGGCGGTGCTCAACTTC CTCGCGGCGCTCACCGACCCGGCCGCACCGGCCATCTCCGCCCTCCCGCTGATCAGCCGG GGCGCCGCCAACCGCGGCCTGCGGCGCGCGCTGCTGCGCGACGACGTCTCGTCGGTGTAC CTCTCCTACGCCTCCTGCAAGAGATCCCTCACGAGGGCCAACGACGCCAAGGCATTCGTT AGAGTGTGGAAGGTGATGGAGATGTGCTACAAGATTTTGGGGGAGGGGAAGCTGGTCACC CTGAGGGAGCTGTTCTACACGCTCCTCTCTGAATCGCCCACCTACTTCACCTGCCAGCGG CATGTCAACCAGACTGTTCAAGATGTCGTCTCGTTGCTCCGGTGTACGAGGCAGAGCCTG GGGATCATGGCGTCGAGTAGAGGGGCACTGATTGGGCGGCTTGTGGTGCAGGGGCCGGAG GAAGAACATGTTGACTGCTCCATTCTTGGACCTTCTGGGCATGCGATCACTGGAGATCTC AATGTATTGAGCAAATTAATCTTTTCTTCAGATGCGCGGTATATCATTGTAGTGGAGAAG GATGCCATATTTCAGAGGCTGGCTGAAGATCGCATATATAGTCACCTTCCGTGTATCCTG ATTACTGCAAAAGGATATCCTGATCTTGCCACAAGGTTTATCTTGCATCGACTGAGCCAG ACTTATCCGAACATGCCGATTTTCGCATTAGTAGACTGGAACCCAGCAGGGCTTGCTATA CTATGCACTTACAAGTATGGAAGCATTTCAATGGGTTTGGAATCATACAGATATGCTTGC AATGTAAAATGGCTTGGCCTAAGAGGAGATGATCTGCAGCTTATACCTCAGAGCGCATAT CAAGAACTGAAGCCACGTGATCTGCAGATTGCCAAAAGCTTGCTGTCATCTAAGTTTCTG CAGGACAAGCACAGAGCTGAGCTGACACTGATGTTGGAGACAGGCAAGCGTGCCGAGATC GAAGCTCTCTACTCACATGGGTTTGATTTCCTGGGGAAATATGTTGCAAGGAAGATTGTA CAGGGTGATTACATTTGA

Peptide Sequence

PEP ID	Os08t0156900-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:3301039:3304257:-1 gene:Os08g0156900 transcript:Os08t0156900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TOPOISOMERASE 6 SUBUNIT A2 description:Spo11/DNA topoisomerase VI, subunit A family protein. (Os08t0156900-01);Similar to Topoisomerase 6 subunit A. (Os08t0156900-02)
Sequence	MAEAGVAAASLFGADRRLCSADILPPAEVRARIEVAVLNFLAALTDPAAPAISALPLISR GAANRGLRRALLRDDVSSVYLSYASCKRSLTRANDAKAFVRVWKVMEMCYKILGEGKLVT LRELFYTLLSESPTYFTCQRHVNQTVQDVVSLLRCTRQSLGIMASSRGALIGRLVVQGPE EEHVDCSILGPSGHAITGDLNVLSKLIFSSDARYIIVVEKDAIFQRLAEDRIYSHLPCIL ITAKGYPDLATRFILHRLSQTYPNMPIFALVDWNPAGLAILCTYKYGSISMGLESYRYAC NVKWLGLRGDDLQLIPQSAYQELKPRDLQIAKSLLSSKFLQDKHRAELTLMLETGKRAEI EALYSHGFDFLGKYVARKIVQGDYI

Transcript Sequence

Transcript ID	Os08t0156900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:3301039:3304257:-1 gene:Os08g0156900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TOPOISOMERASE 6 SUBUNIT A2 description:Spo11/DNA topoisomerase VI, subunit A family protein. (Os08t0156900-01);Similar to Topoisomerase 6 subunit A. (Os08t0156900-02)
Sequence	AGCGGAAACCTGGGCGAGTTGTCCGTTGGCGCCGCCGCCGGCGAGCTCGCGCACGGCCGC CGCGGCAGTACGGGATGGCGGAGGCGGGAGTGGCGGCCGCCTCGCTCTTCGGCGCCGACC GCCGCCTCTGCTCCGCCGACATCCTCCCTCCCGCCGAGGTGCGGGCGAGGATCGAGGTGG CGGTGCTCAACTTCCTCGCGGCGCTCACCGACCCGGCCGCACCGGCCATCTCCGCCCTCC CGCTGATCAGCCGGGGCGCCGCCAACCGCGGCCTGCGGCGCGCGCTGCTGCGCGACGACG TCTCGTCGGTGTACCTCTCCTACGCCTCCTGCAAGAGATCCCTCACGAGGGCCAACGACG CCAAGGCATTCGTTAGAGTGTGGAAGGTGATGGAGATGTGCTACAAGATTTTGGGGGAGG GGAAGCTGGTCACCCTGAGGGAGCTGTTCTACACGCTCCTCTCTGAATCGCCCACCTACT TCACCTGCCAGCGGCATGTCAACCAGACTGTTCAAGATGTCGTCTCGTTGCTCCGGTGTA CGAGGCAGAGCCTGGGGATCATGGCGTCGAGTAGAGGGGCACTGATTGGGCGGCTTGTGG TGCAGGGGCCGGAGGAAGAACATGTTGACTGCTCCATTCTTGGACCTTCTGGGCATGCGA TCACTGGAGATCTCAATGTATTGAGCAAATTAATCTTTTCTTCAGATGCGCGGTATATCA TTGTAGTGGAGAAGGATGCCATATTTCAGAGGCTGGCTGAAGATCGCATATATAGTCACC TTCCGTGTATCCTGATTACTGCAAAAGGATATCCTGATCTTGCCACAAGGTTTATCTTGC ATCGACTGAGCCAGACTTATCCGAACATGCCGATTTTCGCATTAGTAGACTGGAACCCAG CAGGGCTTGCTATACTATGCACTTACAAGTATGGAAGCATTTCAATGGGTTTGGAATCAT ACAGATATGCTTGCAATGTAAAATGGCTTGGCCTAAGAGGAGATGATCTGCAGCTTATAC CTCAGAGCGCATATCAAGAACTGAAGCCACGTGATCTGCAGATTGCCAAAAGCTTGCTGT CATCTAAGTTTCTGCAGGACAAGCACAGAGCTGAGCTGACACTGATGTTGGAGACAGGCA AGCGTGCCGAGATCGAAGCTCTCTACTCACATGGGTTTGATTTCCTGGGGAAATATGTTG CAAGGAAGATTGTACAGGGTGATTACATTTGACAGTGCATTGCTGCCTGCCTCATGGTTT CTCTGGTTTTACTGAGAACTGAAATTTTGAGCTGATTCCATCAGCCCTGGCCCTGTCCAG TTTTCTTCAAAAATGACTTGTATCTTTGAAGAATGTTGCTGTTGTTACTGCACGTCCCCT GCGTGAGTATGCTGTATGCAGAATACTTGAAATTATTACACCATCTGAAGGTGAAGGAGA AATCTGAACCTTGACATACACAAAAGGATACTGCTATACATCCCCAGAATGTCAGTAGTA AACTGCTCAGCTGTGGACTACTGGATGTAAATTGTAGTCTAGCAGTTGCATATATCTCCT CCTTTTTACCTCCTTTATTAAACAAAGATCAAACGGTCTTTAGTGTGTTAACACATGGAA TATTGTCGGATTTACTGCAGTTCTAAGGTGCTGTTTGATTCACTTCC