Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0156700-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:3285096:3289874:-1 gene:Os08g0156700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to VAP27. (Os08t0156700-01)
Sequence	ATGGCTTCCCCCGGACCGGCCACCGCCGGCGAGCTCCTCCGCATCGACCCCGTCGAACTC CGCTTCCCCTTCGAGTTGAAGAAGCAGATCTCGTGCTCGATGCAGCTATCGAATCTCAGC GACGACTACATCGCCTTCAAGGTGAAAACTACAAGCCCAAAGAAGTATTCGGTGCGGCCT AACACAGGGGTTGTCTTGCCACGGTCTACCTGCGATGTTGTTGTGACAATGCAAGCACAG CGGGAAGCCCCGCCTGACATGCAGTGCAAAGATAAGTTCCTAGTCCAGAGCGTCATTGCA CCTTCCGGTGTAACTGTGAAGGATATCACGGGAGAAATGTTTACGAAGGAGTCCGGAAAT AAGGTTGAAGAGGTAAAATTGCGAGTGACCTATATTGCTCCTCCACAGCCACCATCTCCT GTTCCCGAGGAATCAGAAGAAGGTTCCCCATCAAGGGTTTCTGAGTCAGAAAATGGAGAC AGTCTTGGTGGGGGTTTCACTAGAGCACTGAGAGAACGCATTGAGCCTCAAGAAAATTCA TTAGAGGCTGGAGCTTTGATTAACAAATTGAATGAAGAGAAGAACTCTGCAATTCAACAG AACCATAAAATTAGACAGGAACTGGATATGATGAGACGGGAGATAAGCAAGAAGCGCGGA GGGTTCTCCTTCATAATCGTCATAATTGTCGCCTTGATCGGGATCTTCTTGGGCTATATG ATGAAGTCATAA

Peptide Sequence

PEP ID	Os08t0156700-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:3285096:3289874:-1 gene:Os08g0156700 transcript:Os08t0156700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to VAP27. (Os08t0156700-01)
Sequence	MASPGPATAGELLRIDPVELRFPFELKKQISCSMQLSNLSDDYIAFKVKTTSPKKYSVRP NTGVVLPRSTCDVVVTMQAQREAPPDMQCKDKFLVQSVIAPSGVTVKDITGEMFTKESGN KVEEVKLRVTYIAPPQPPSPVPEESEEGSPSRVSESENGDSLGGGFTRALRERIEPQENS LEAGALINKLNEEKNSAIQQNHKIRQELDMMRREISKKRGGFSFIIVIIVALIGIFLGYM MKS

Transcript Sequence

Transcript ID	Os08t0156700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:3285096:3289874:-1 gene:Os08g0156700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to VAP27. (Os08t0156700-01)
Sequence	ATTCCTCATTTTCCCTTTTCTTCCTTCCTTCCCCTCTTTGGCTTCTCTCCTGGCCTCTCC TCTCCTCTCCTCTCGTCGTTGCACCCACCTCCTCTCCCAAGATCTCACCTTTCCACCCCC TCCGCCCCCGCCTCGATCCGGCAATGGCTTCCCCCGGACCGGCCACCGCCGGCGAGCTCC TCCGCATCGACCCCGTCGAACTCCGCTTCCCCTTCGAGTTGAAGAAGCAGATCTCGTGCT CGATGCAGCTATCGAATCTCAGCGACGACTACATCGCCTTCAAGGTGAAAACTACAAGCC CAAAGAAGTATTCGGTGCGGCCTAACACAGGGGTTGTCTTGCCACGGTCTACCTGCGATG TTGTTGTGACAATGCAAGCACAGCGGGAAGCCCCGCCTGACATGCAGTGCAAAGATAAGT TCCTAGTCCAGAGCGTCATTGCACCTTCCGGTGTAACTGTGAAGGATATCACGGGAGAAA TGTTTACGAAGGAGTCCGGAAATAAGGTTGAAGAGGTAAAATTGCGAGTGACCTATATTG CTCCTCCACAGCCACCATCTCCTGTTCCCGAGGAATCAGAAGAAGGTTCCCCATCAAGGG TTTCTGAGTCAGAAAATGGAGACAGTCTTGGTGGGGGTTTCACTAGAGCACTGAGAGAAC GCATTGAGCCTCAAGAAAATTCATTAGAGGCTGGAGCTTTGATTAACAAATTGAATGAAG AGAAGAACTCTGCAATTCAACAGAACCATAAAATTAGACAGGAACTGGATATGATGAGAC GGGAGATAAGCAAGAAGCGCGGAGGGTTCTCCTTCATAATCGTCATAATTGTCGCCTTGA TCGGGATCTTCTTGGGCTATATGATGAAGTCATAATTCTTTGAGTCGACATCGAAGGGAA CTGGACCCCACATTCATGCCAAGTTATTCTTGGGAGGCAAAGAGACCGTCATGAAGTTCT CCTTTCTGTTTTGTCAATATAGGAGTGTTGCGTACGTGGGAAAATCTTCAACCAGATTAA GCTTGTTTTCTTTTGCAGTTTGTTGTTTGTTGTATTGGGTGAGTTGTGCACTTCTGACAC TGTAACTTGGAAATGCATTAATCGCTTCTGTTGACAGTTTATCTTGCC