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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0155400-02
CDS Infomation

cds chromosome:IRGSP-1.0:8:3182517:3186026:-1 gene:Os08g0155400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:nitrate transporter 1.1A description:Similar to Nitrate/chlorate transporter. (Os08t0155400-01);Similar to cDNA clone:J023045B01, full insert sequence. (Os08t0155400-02);Similar to cDNA clone:J023045B01, full insert sequence. (Os08t0155400-03)
Sequence

CTGAAAACTGATGTTCTTCTGCAAGTAAGCTTAACAAAAGTTGCAAATGTTTTTCTCCTC
AGGTTCTTGGACCATGCGGCGATCAACGACGCGCCGGACGGCGAGCAGAGCAAGTGGACG
CTGGCGACGCTGACGGACGTGGAGGAGGTGAAGACGGTGGCGAGGATGCTGCCGATCTGG
GCGACGACGATCATGTTCTGGACGGTGTACGCCCAGATGACCACCTTCTCCGTGTCCCAG
GCGACCACCATGGACCGCCACATCGGCGCCTCCTTCCAGATCCCGGCGGGCTCCCTCACC
GTCTTCTTCGTCGGCTCCATCCTCCTCACCGTGCCCATCTACGACCGCCTCGTCGTGCCC
GTGGCGCGGCGCGCCACCGGCAACCCGCACGGGCTCACCCCGCTCCAGCGCATCGGCGTC
GGGCTGGTGCTGTCCATCGTCGCCATGGTGTGCGCCGCGCTGACGGAGGTGAGGCGGCTC
CGCGTGGCGAGGGACGCGCGCGTCGGCGGCGGCGAGGCCGTGCCCATGACCGTGTTCTGG
CTGATCCCGCAGTTCCTGTTCGTCGGCGCCGGCGAGGCGTTCACCTACATCGGCCAGCTC
GACTTCTTCCTCCGCGAGTGCCCCAAGGGGATGAAGACGATGAGCACGGGGCTGTTCCTG
AGCACGCTCTCGCTGGGGTTCTTCGTCAGCTCGGCGCTCGTCGCCGCCGTCCACAAGCTC
ACCGGCGACCGCCACCCCTGGCTCGCCGACGACCTCAACAAGGGCCAGCTCCACAAGTTC
TACTGGCTCCTCGCCGGCGTCTGCCTCGCCAACCTCCTCGTATACCTCGTCGCCGCCAGG
TGGTACAAGTACAAGGCCGGCCGCGCCGCCGCCGCCGGCGACGGCGGCGTCGAGATGGCC
GACGCCGAGCCATGCCTCCACTGA

Peptide Sequence

PEP ID

Os08t0155400-02
PEP Infomation

pep chromosome:IRGSP-1.0:8:3182517:3186026:-1 gene:Os08g0155400 transcript:Os08t0155400-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:nitrate transporter 1.1A description:Similar to Nitrate/chlorate transporter. (Os08t0155400-01);Similar to cDNA clone:J023045B01, full insert sequence. (Os08t0155400-02);Similar to cDNA clone:J023045B01, full insert sequence. (Os08t0155400-03)
Sequence

LKTDVLLQVSLTKVANVFLLRFLDHAAINDAPDGEQSKWTLATLTDVEEVKTVARMLPIW
ATTIMFWTVYAQMTTFSVSQATTMDRHIGASFQIPAGSLTVFFVGSILLTVPIYDRLVVP
VARRATGNPHGLTPLQRIGVGLVLSIVAMVCAALTEVRRLRVARDARVGGGEAVPMTVFW
LIPQFLFVGAGEAFTYIGQLDFFLRECPKGMKTMSTGLFLSTLSLGFFVSSALVAAVHKL
TGDRHPWLADDLNKGQLHKFYWLLAGVCLANLLVYLVAARWYKYKAGRAAAAGDGGVEMA
DAEPCLH

Transcript Sequence

Transcript ID

Os08t0155400-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:3182517:3186026:-1 gene:Os08g0155400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:nitrate transporter 1.1A description:Similar to Nitrate/chlorate transporter. (Os08t0155400-01);Similar to cDNA clone:J023045B01, full insert sequence. (Os08t0155400-02);Similar to cDNA clone:J023045B01, full insert sequence. (Os08t0155400-03)
Sequence

GTGTGCACACCGAAAGTTAGAGGCCAGGAAAAAGGTAGAAAAAAACAGAAGAAAGTTAGC
CCTAGAAGCCACAACTAGCTTAACAAGAGCTAGTGTATCATTTTGTGTAGGCAATCTCCA
TCTTGCAAGTGATCAGGACAAGGAGATCTAAGCAGCAAACCTCTCTCTGTCTCTCTTGTC
TTTCTCTTTCTCACATGCATCAGCCTTTCATTTTGGCATGGCTCACTTGGAGTTGCATTG
CACATCTGTCCATTTTCTTGATGCTTCAAAAGCAATGGGGATCATTCATCTCCATGGATT
GGACCATATGCAAAAGTAGCTTGAGAAAAGGAAGGAGGGGCATGTGAGCAGTGTAGTTTT
AGCATTGTGGGTCTCCCCTATAGTTGTCTTAGGTTGGTGAGGTTGATGGGAGAAACTAAA
TCTACCCCCCATAGTTATTATTATTGTCCGCATCGATAAAAAAGTTACCTTCTCTTCCCC
TATAGTTATCTTATGTTGGTGAGGTTGATAGGAGAAACCAAATCTACCCTCCGTAGTTAT
TATTATTGTTCGCATAGATTAAAAAGCCGCCTTTTTAAGTCAAAAGAGCAGTGGTGATAT
GTGAGAATTCAGGTACACCTCGTGGTTAATTAATTACACTTTTTAAGCCTGCGAGCGACA
CTTGTCGTGTCACTCACCTCGAGATTCATGACTGTTATTTTAGTTAGGCACACGTGATCA
CATTCATTTTAGCCATGGTAGTCGGCCTCAGCACGGATATAGTAGGGCAGAGTTCAAGAA
AATGCCTTCATGGCAACTTCCCTGCCATGAACTCTTCAGCCCCATGGTGTTCCACATGAT
AAAGTTCAGCTCCTTTTTTTGAACAGTAACAATCAAAGTCATGTCAGATTAACACTTTGA
ATAAAAACATTATGAGATTATGTTTTATCTTATCGATAGGTTGGTGTCAGTCTACATGGT
TGTTTAGTCTCTGTTCGATCTGTCAGTGTCTCCAGATTATGAACTCACATCTTCAGAGTT
TATCTGGGGATGTATAGAGCCGCAGATGCGTATATGATTATTATCAACATTGCATCAAAT
CACATGAAAACATGTTGCTTGTTCCTGATACTAATTAGTAGCTTGACAGATCAGATCAAC
TTGTGCAAATGGGAAGAATACTGCCAACTATGAGACACACTTGACAAATTGTTTAGTCCT
TAGTTTTGGCTGGAAACTCTGACGATGTTGTTTTCAGAAAGATAAGCCCTGGAAGACTTA
GCTGCTGACGACGATTCCCTCACGAAATGAGAGGGTGATTTTAATTTGACGAATAGATTA
TAGATGGTCATGTTAATGGGGGCATAATCAGAGCAACTAACTGGGATAAAATTGTTTTAG
TGTTATGATTGGATTTGTGTCTTGTTCTTGTGAAGCATCTTGTTTCTGTGACCACTGCTT
TAGCTTGCACACGACCTCCTTGTTGCCTTTTTTTTTCTTTGGTCCCAAAGGTGAAAAGAA
CATTGCAATAGCTTTTGTTTCAATTAAAATAGGTCAATGATAGACACAAGTATTGCAAAA
GTCTTACTTTATATGTTTTCTGCAATCACTGCCTAAACTTTTTGAAAAGTTACCAAGTTT
GCAAAAATTGCTGATGAGGTTTCTGAATCTGAACTCTGAAGAGAACAACTCAATCCTTCG
AAATTCCTGCATGCTGATTGAAAGAATTAGCTGACGATTGTACTACACATGGTTGAAACT
GAACTGACAATTGATGTACACGTGTTTGAAACTTAAGTGAAAATTGATGGACACATGGTT
GAAACTTCAGTGACAACTGTAGTACACATGATTGAAACTTAACTGAAAGTTAATGCACAC
AAAGATTGAAACTATACATGGTTGAAAATTTTAACTGAAAATTGATGCACTCATCATTGA
AGCTTAAACTGAAAATCGATGCACACGTGATTGAATCTTAACTGGAAATTGATTTTTTTT
TCTTTTTGCAAGTAAGCTTAATAAACTCTGCACTACACATGATTGCAACTTGACTGAAAT
TGATGCACACATGATTGAAACTCAACTGACAATTGTACTACACATGATCGAAACTCAACT
GAAAATTGATGCACGCATGATTGCAGCTTCACTGAATACTGATGTACACACACATGATTG
AAACTTAACTGAAAAAACTTAAATGTACAATACATATTATTGAAACTTAACTGAAAAAAC
TTGATGCACAATACACATGATTGAAACTTAAACTGAACAAACTTGATGTTACAATACATA
TGATGATTGAAACTTAACCTGAAAGAACTTGATGTACAGTACAATACAAATGGCTGAAAC
TTGGTAGTAACTGAAAACTGATGTTCTTCTGCAAGTAAGCTTAACAAAAGTTGCAAATGT
TTTTCTCCTCAGGTTCTTGGACCATGCGGCGATCAACGACGCGCCGGACGGCGAGCAGAG
CAAGTGGACGCTGGCGACGCTGACGGACGTGGAGGAGGTGAAGACGGTGGCGAGGATGCT
GCCGATCTGGGCGACGACGATCATGTTCTGGACGGTGTACGCCCAGATGACCACCTTCTC
CGTGTCCCAGGCGACCACCATGGACCGCCACATCGGCGCCTCCTTCCAGATCCCGGCGGG
CTCCCTCACCGTCTTCTTCGTCGGCTCCATCCTCCTCACCGTGCCCATCTACGACCGCCT
CGTCGTGCCCGTGGCGCGGCGCGCCACCGGCAACCCGCACGGGCTCACCCCGCTCCAGCG
CATCGGCGTCGGGCTGGTGCTGTCCATCGTCGCCATGGTGTGCGCCGCGCTGACGGAGGT
GAGGCGGCTCCGCGTGGCGAGGGACGCGCGCGTCGGCGGCGGCGAGGCCGTGCCCATGAC
CGTGTTCTGGCTGATCCCGCAGTTCCTGTTCGTCGGCGCCGGCGAGGCGTTCACCTACAT
CGGCCAGCTCGACTTCTTCCTCCGCGAGTGCCCCAAGGGGATGAAGACGATGAGCACGGG
GCTGTTCCTGAGCACGCTCTCGCTGGGGTTCTTCGTCAGCTCGGCGCTCGTCGCCGCCGT
CCACAAGCTCACCGGCGACCGCCACCCCTGGCTCGCCGACGACCTCAACAAGGGCCAGCT
CCACAAGTTCTACTGGCTCCTCGCCGGCGTCTGCCTCGCCAACCTCCTCGTATACCTCGT
CGCCGCCAGGTGGTACAAGTACAAGGCCGGCCGCGCCGCCGCCGCCGGCGACGGCGGCGT
CGAGATGGCCGACGCCGAGCCATGCCTCCACTGATCCACACCGTCCATCCATCCATCCAT
CAGACGGCTACGATTTCTTCTTCGCATCTTGTACTATATATATACTAGTATACTACTAGT
ACGTACGTACGTACGTGTGTACCAAGCGAGGCGTGTATGCGTATACGTATACGTGTACGT
GTGCCTGCGTGTAGTATAATGGAATTAATAACTTGTTAGAGGGGGGAAACAGTAAAAAAA
ATGACGAAATTAATGGTGGGGATTAGGGAG