Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0154250-01
CDS Infomation

cds chromosome:IRGSP-1.0:8:3120327:3125522:-1 gene:Os08g0154250 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to monocopper oxidase. (Os08t0154250-01)
Sequence

ATGGCGGCGGCGGCGGCGGTTGCGGCGGTGGTGGTCGCGGCCGTGGTGGCGGCGGCGGCG
TCCGCGGCGGCCCCCGCGTCGGCCGGCGAGCCCACGCGCGACGTGCGGTGGGAGGTCGGC
TACATGACGGTGGCGCCGCTCGGCGTCTCGCAGAAGGTGATCGCGATAAACAACCAGTTC
CCGGGCCCACTCCTGAACGTGACAACCAACTGGAACGTGAGGGTGAACGTCCAAAACAAC
CTGGATGAGCCCCTCCTCCTCACCTGGGATGGCATCCAGATGAGGATGAACTCATGGCAG
GACGGCGTCGCCGGCACCAACTGCCCGATCCCTCCCGGGTGGAACTGGACCTACCAGTTC
CAGCTCAAGGACCAGATCGGCAGCTTCTTCTACTTCCCTTCGCTTGGTCTCCAGCGAGCC
GCCGGCGGGTTCGGCCCGGTCACCGTCAACAACCGCGCCGTCGTGCCGGTCCCCTTCGCC
CAGCCCGACGGCGACATCACCTTGTTCATCGGTGATTGGTACACCAAGAGCCACGTCGAA
TTGAGGAAAATGCTAGATGATGGTAAGGATCTCGGGATACCGGATGGAATTCTGATCAAT
GGGAAAGGCCCTTACAGCTATGACAACACATTGATTCCAGAAGGCCTTCAACATGAAACT
GTTGGAGTTGAGCCAGGCAAAACTTATCGCTTCCGTGTTCACAATGTCGGCACCTCAACT
AGCCTCAACTTCAGAATCCAGAATCACAATATGCGCCTAGTAGAGGCCGAAGGAACCTAC
ACTTATCAGCAGAATTACACCAATCTTGACATCCATGTTGGACAGTCATACTCTTTCTTG
GTGACCATGGACCAAAATGCAAGCACTGACTACTACATTGTGGCGAGCCCAAGGTTCGTC
ACGAACGAGTCTCGCTGGCACGATGTCAACGGTGTGGCTGTCCTGCAGTACTCAAACTCC
AAAGGAAGAGCTTCTGGTCCCCTTCCTGATGGTCCAAATGATTTCTATTACAAGTCCTAT
TCCATGGACCAAGCCAGGTCTATCAAAATGAATACAACTGCTGGTGCTGCACGTCCAAAT
CCACAGGGATCATTCCGCTACGACTCTATCAACATCACTCAGACCTTCGTTCTCAAGAAC
GAGTTACCTTTGCTCATCAATGGAAAGCGTCGAAGGACGATAAACGGGGTCTCATACTCT
CCACCAGAGACTCCACTGAGGCTTGCTGATCTCCACAACTTGACTGGAGTGTACAAGACT
GACTTCCCCACAATGCCAGGCAATGCTCCACCAAAAATGGCTTCATCCACGCTGAACGCA
TCGTACAAGGGCTTCCTCGAGATCGTCTTTCAGAACAATGACACTGGTGTTCAGACCTAC
CATCTGGATGGTTACTCATTCTTTGTTGTTGGGATGGATAATGGTGATTGGACTCCAGAT
TGCAGGAGTAGGTACAACAAATGGGATGCCATCTCTCGCAGCACTACTCAGGTTTTCCCT
GGAGGGTGGACTGCGGTTCTAGTCTCGCTCGACAATGTTGGCATCTGGAATCTCCGGTCT
GAGAAGCTGGATAACTGGTACAATGGGCAGGAGGTCTATGTGAAAGTGGCTGATCCACTG
GGATACAACATCACTGAAATGATCATGCCAGATAATGCATTGTACTGTGGTCTACTGAAA
GACTTGCAAAAGCCACAGATTCACCAGGTAAACAGCAAGTCATCGGCTCAAGCTGCAGAT
CGATGGGGCGCGCGAGTTCTTGCAATGGTGTTGCTGATCATTGCAGCTGTGGTTTCCATT
TAA

Peptide Sequence

PEP ID

Os08t0154250-01
PEP Infomation

pep chromosome:IRGSP-1.0:8:3120327:3125522:-1 gene:Os08g0154250 transcript:Os08t0154250-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to monocopper oxidase. (Os08t0154250-01)
Sequence

MAAAAAVAAVVVAAVVAAAASAAAPASAGEPTRDVRWEVGYMTVAPLGVSQKVIAINNQF
PGPLLNVTTNWNVRVNVQNNLDEPLLLTWDGIQMRMNSWQDGVAGTNCPIPPGWNWTYQF
QLKDQIGSFFYFPSLGLQRAAGGFGPVTVNNRAVVPVPFAQPDGDITLFIGDWYTKSHVE
LRKMLDDGKDLGIPDGILINGKGPYSYDNTLIPEGLQHETVGVEPGKTYRFRVHNVGTST
SLNFRIQNHNMRLVEAEGTYTYQQNYTNLDIHVGQSYSFLVTMDQNASTDYYIVASPRFV
TNESRWHDVNGVAVLQYSNSKGRASGPLPDGPNDFYYKSYSMDQARSIKMNTTAGAARPN
PQGSFRYDSINITQTFVLKNELPLLINGKRRRTINGVSYSPPETPLRLADLHNLTGVYKT
DFPTMPGNAPPKMASSTLNASYKGFLEIVFQNNDTGVQTYHLDGYSFFVVGMDNGDWTPD
CRSRYNKWDAISRSTTQVFPGGWTAVLVSLDNVGIWNLRSEKLDNWYNGQEVYVKVADPL
GYNITEMIMPDNALYCGLLKDLQKPQIHQVNSKSSAQAADRWGARVLAMVLLIIAAVVSI

Transcript Sequence

Transcript ID

Os08t0154250-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:3120327:3125522:-1 gene:Os08g0154250 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to monocopper oxidase. (Os08t0154250-01)
Sequence

GAGAACCAAACCAAAAACCCCTCCTTTTTCTTCCTTCTCCTGCAGCGAGAGAGAGGATGG
CGGCGGCGGCGGCGGTTGCGGCGGTGGTGGTCGCGGCCGTGGTGGCGGCGGCGGCGTCCG
CGGCGGCCCCCGCGTCGGCCGGCGAGCCCACGCGCGACGTGCGGTGGGAGGTCGGCTACA
TGACGGTGGCGCCGCTCGGCGTCTCGCAGAAGGTGATCGCGATAAACAACCAGTTCCCGG
GCCCACTCCTGAACGTGACAACCAACTGGAACGTGAGGGTGAACGTCCAAAACAACCTGG
ATGAGCCCCTCCTCCTCACCTGGGATGGCATCCAGATGAGGATGAACTCATGGCAGGACG
GCGTCGCCGGCACCAACTGCCCGATCCCTCCCGGGTGGAACTGGACCTACCAGTTCCAGC
TCAAGGACCAGATCGGCAGCTTCTTCTACTTCCCTTCGCTTGGTCTCCAGCGAGCCGCCG
GCGGGTTCGGCCCGGTCACCGTCAACAACCGCGCCGTCGTGCCGGTCCCCTTCGCCCAGC
CCGACGGCGACATCACCTTGTTCATCGGTGATTGGTACACCAAGAGCCACGTCGAATTGA
GGAAAATGCTAGATGATGGTAAGGATCTCGGGATACCGGATGGAATTCTGATCAATGGGA
AAGGCCCTTACAGCTATGACAACACATTGATTCCAGAAGGCCTTCAACATGAAACTGTTG
GAGTTGAGCCAGGCAAAACTTATCGCTTCCGTGTTCACAATGTCGGCACCTCAACTAGCC
TCAACTTCAGAATCCAGAATCACAATATGCGCCTAGTAGAGGCCGAAGGAACCTACACTT
ATCAGCAGAATTACACCAATCTTGACATCCATGTTGGACAGTCATACTCTTTCTTGGTGA
CCATGGACCAAAATGCAAGCACTGACTACTACATTGTGGCGAGCCCAAGGTTCGTCACGA
ACGAGTCTCGCTGGCACGATGTCAACGGTGTGGCTGTCCTGCAGTACTCAAACTCCAAAG
GAAGAGCTTCTGGTCCCCTTCCTGATGGTCCAAATGATTTCTATTACAAGTCCTATTCCA
TGGACCAAGCCAGGTCTATCAAAATGAATACAACTGCTGGTGCTGCACGTCCAAATCCAC
AGGGATCATTCCGCTACGACTCTATCAACATCACTCAGACCTTCGTTCTCAAGAACGAGT
TACCTTTGCTCATCAATGGAAAGCGTCGAAGGACGATAAACGGGGTCTCATACTCTCCAC
CAGAGACTCCACTGAGGCTTGCTGATCTCCACAACTTGACTGGAGTGTACAAGACTGACT
TCCCCACAATGCCAGGCAATGCTCCACCAAAAATGGCTTCATCCACGCTGAACGCATCGT
ACAAGGGCTTCCTCGAGATCGTCTTTCAGAACAATGACACTGGTGTTCAGACCTACCATC
TGGATGGTTACTCATTCTTTGTTGTTGGGATGGATAATGGTGATTGGACTCCAGATTGCA
GGAGTAGGTACAACAAATGGGATGCCATCTCTCGCAGCACTACTCAGGTTTTCCCTGGAG
GGTGGACTGCGGTTCTAGTCTCGCTCGACAATGTTGGCATCTGGAATCTCCGGTCTGAGA
AGCTGGATAACTGGTACAATGGGCAGGAGGTCTATGTGAAAGTGGCTGATCCACTGGGAT
ACAACATCACTGAAATGATCATGCCAGATAATGCATTGTACTGTGGTCTACTGAAAGACT
TGCAAAAGCCACAGATTCACCAGGTAAACAGCAAGTCATCGGCTCAAGCTGCAGATCGAT
GGGGCGCGCGAGTTCTTGCAATGGTGTTGCTGATCATTGCAGCTGTGGTTTCCATTTAAA
TTTGTTGGAATCAGATGAGGATATCTTTTAGTTAGGCTCTGTGGGTGATAGAAAATCATA
TTGTTCTTTGAGTACAGAACAACTTGAGGAAGCTGTCTGTGCAAAGTGCAAAACTTGGAT
TCTAGAAATGAAAAACCTGTCAATTTTCC