Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0153900-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:3093804:3094878:-1 gene:Os08g0153900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF599 family protein. (Os08t0153900-01)
Sequence	ATGATGAAGAAGACATCCAAGGAGCTGGACTACGTGCTGGTGCCGATGGGGATGGCGGTG ATGGTGGCGTACCACGCGTGGCTCCTCCTCCGCATCCGGCGGCGCCCGGCGACCACCGTG ATCGGCATCAACGCCATCAACCGCCGCATATGGGTGCGCCACGTCATGGAGGAGGCGTCC GGGAAGCACGCCGTGCTGGCGGTGCAGACCATGCGCAACAGCATCATGGCCTCCACCGTC CTCGCCTCCGTCGCCATCACCCTCAGCTCCCTCGTCGCCGCGCTCATGGCCAGCGGCGTC GCCCACGGCATCTTCTCCCCCGGCGCCGGCGACGGCCAGGGCGAGATCGTCGTCGGCGCC GGCGGCGAGACGGCGCTGTCGATCAAGTTCTTCGCCATCCTCGTCTGCTTCCTCGTCGCC TTCCTCCTCAACGTCCAGTCCATCCGCTACTACAGCCACACCGGCATCCTCGTCAACGTG CCGCTCCACGCGCACCGCCACCGCCGCCGCCGACCGGGGCTCGCCGTCGACTACGTGACG GCGACGCTCAACCGCGGCAGCTACTTCTGGTCCCTCGGCGTCCGCGCCTTCTACTTCTCG TGCCCCGTCTTCCTCTGGCTCTTCGGCCCCATCCCCATGTTCGCCTCCTGCCTCGCCATG GTCTGCGCGCTCTACTTCCTCGACGTGTACACCGAGTGGGACGAGAAGCCGGAGGAGGAA GAGGAGCTCAACGGCAATGGCGATGGCGACGACGGCGGCGCCGCCGCGTGCCATGAACAA CCCAAGATGGCCGCCGGCAACAGGGTGACGCCTCAGCAAGACGTCGTCTGA

Peptide Sequence

PEP ID	Os08t0153900-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:3093804:3094878:-1 gene:Os08g0153900 transcript:Os08t0153900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF599 family protein. (Os08t0153900-01)
Sequence	MMKKTSKELDYVLVPMGMAVMVAYHAWLLLRIRRRPATTVIGINAINRRIWVRHVMEEAS GKHAVLAVQTMRNSIMASTVLASVAITLSSLVAALMASGVAHGIFSPGAGDGQGEIVVGA GGETALSIKFFAILVCFLVAFLLNVQSIRYYSHTGILVNVPLHAHRHRRRRPGLAVDYVT ATLNRGSYFWSLGVRAFYFSCPVFLWLFGPIPMFASCLAMVCALYFLDVYTEWDEKPEEE EELNGNGDGDDGGAAACHEQPKMAAGNRVTPQQDVV

Transcript Sequence

Transcript ID	Os08t0153900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:3093804:3094878:-1 gene:Os08g0153900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF599 family protein. (Os08t0153900-01)
Sequence	TCGTCTCCCTCGCCGCCGGCCGCCGGCGAACCCAAGATTTCAGTTCAGACGAGCACCAGC CGCCGCCGCCGTGATGATGAAGAAGACATCCAAGGAGCTGGACTACGTGCTGGTGCCGAT GGGGATGGCGGTGATGGTGGCGTACCACGCGTGGCTCCTCCTCCGCATCCGGCGGCGCCC GGCGACCACCGTGATCGGCATCAACGCCATCAACCGCCGCATATGGGTGCGCCACGTCAT GGAGGAGGCGTCCGGGAAGCACGCCGTGCTGGCGGTGCAGACCATGCGCAACAGCATCAT GGCCTCCACCGTCCTCGCCTCCGTCGCCATCACCCTCAGCTCCCTCGTCGCCGCGCTCAT GGCCAGCGGCGTCGCCCACGGCATCTTCTCCCCCGGCGCCGGCGACGGCCAGGGCGAGAT CGTCGTCGGCGCCGGCGGCGAGACGGCGCTGTCGATCAAGTTCTTCGCCATCCTCGTCTG CTTCCTCGTCGCCTTCCTCCTCAACGTCCAGTCCATCCGCTACTACAGCCACACCGGCAT CCTCGTCAACGTGCCGCTCCACGCGCACCGCCACCGCCGCCGCCGACCGGGGCTCGCCGT CGACTACGTGACGGCGACGCTCAACCGCGGCAGCTACTTCTGGTCCCTCGGCGTCCGCGC CTTCTACTTCTCGTGCCCCGTCTTCCTCTGGCTCTTCGGCCCCATCCCCATGTTCGCCTC CTGCCTCGCCATGGTCTGCGCGCTCTACTTCCTCGACGTGTACACCGAGTGGGACGAGAA GCCGGAGGAGGAAGAGGAGCTCAACGGCAATGGCGATGGCGACGACGGCGGCGCCGCCGC GTGCCATGAACAACCCAAGATGGCCGCCGGCAACAGGGTGACGCCTCAGCAAGACGTCGT CTGAAAACTGAAACTCTGAAGGTGTTTGTTGCCTGTGCCTGCATGCAGGTGATCTGGATT CAGCAGCTCGTTGAATCAAGATTAATAATTAGTTTATGTACTTTGGTATAAATAAAATCG CCGTGCCTAGGATTCAATATCTCGTTGAATCCTAGATTTGTCGCGACAAATTCGC