Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0153600-00
CDS Infomation	cds chromosome:IRGSP-1.0:8:3082739:3086311:-1 gene:Os08g0153600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os08t0153600-00)
Sequence	TTCATTCATCAAATCCCACGGTCCAGAATCATCGAATCCAACGGGTCGAGATCGTCGCGG ACCCTCTCCCCTCCGCACGAGCTCCTCACGCGCGTCCCCCAAATCCCCAATCACGCCGCC AATGAGAACCCCGTCACTGTCCTCCTCTTCATCCTCGCCGCGGCCCACCGCCTCCGCCGG TTCCTCCTCCTCCTCCGCCGCCGCCGCCGCCGCCGCGCAGTCTCGCCACCACTTCGCGCA GGGCGCCCAGCTCCTCGCCCGTGCGCGCGCCGCCGCAGGGACCAAGAAGCGGAGCCCCCC GCGCGGCGCTCGCCGAGGCCGACCGCGCCATCACCCGTCGACGCCGCCACCTCACCCGAC CCGTGCTCCCTCCCCGTCCCCAATCCCGACGAATCCTCCATCGCGCCGCCGCCGGCTTCC ACCACGCCCCCCGACCATCCCCCCTCTCCCCAATCCCGGCAGCTCCTCCCATCTTGCGAG TCACCGATCGCCCAATGCGGGTTTGTCGTTGCAGTGATCGAACCGTCGCACCGCCGCCGG CTTCCACTGCGCCCCCCAGCCATCTCTCCTCCTCCCCAATCCCGGCGGTCTCCGTCACGC CGCCATCAAACCACGGCCACCTACAACTGCCTCCTTGCCGGCTACGCCAGGGCGCTCGGC CGCCTCGCGGACGCACGCCACCTGTTCGACCGAATACCGACCCCGGATGCTGTCTCCTAC AACACGCTCCTCTCGTGCCACTTCGCCAGCGGCGACGCCGATGGCGCCCGGAGGCTCTTC GCATCGATGCCGGTCAGGGACGTCGTGTCCTGGAACACCATGGTGTCGGGGCTGTCCAAG AGTGGGGCCGTGGAGGAGGCCAAGGCCGTGTTCCTAGCAATGCCAGTGAGGAACTCCGTT TCCTGGAACGCCATGGTTTCCGGGTTCGCCTGCTCTAGAGACATGAGCGCGGCGGAGGAG TGGTTTAGGAATGCGCCGGAGAAGGGGGACGCCGTTCTGTGGACTGCGATGGTGTCGGGG TACATGGATATCGGCAATGTGGTGAAGGCCATCGAATACTTTGAGGCAATGCCAGTGAGG AACTTGGTTTCATGGAATGCTGTGGTTGCTGGGTATGTGAAGAATTCACATGCGGATGAT GCTTTGAGGCTGTTCAGGACCATGGTCAGGGAGGCCAATGTTCAGCCAAATGCATCGACG TTAAGCAGCGTGCTTCTTGGTTGCAGTAACTTGTCTGCACTTGGATTTGGTAAGCAGATA CATCAGTGGTGTATGAAGCTTCCGTTGAGTAGGAACTTGACGGTGGGCACGTCACTTGTG AGCATGTATTGCAAGTGTGGGGACTTGAGTAGCGCGTGCAAACTGTTTGGTGAAATGCAT ACGAGGGATGTGGTTGCGTGGAATGCTATGATATCTGGCTATGCTCAGCATGGAGATGGG AAGGAAGCTATCAATTTATTTGAAAGGATGAAGGATGAAGGAGTTGAGCCCAACTGGATT ACTTTTGTGGCAGTATTGACTGCTTGTATCCACACTGGCTTGTGTGATTTTGGAATACGG TGTTTCGAGGGAATGCAGGAATTGTACGGAATTGAGCCTCGGGTTGATCATTACTCATGC ATGGTGGATCTTCTCTGCAGAGCTGGTAAGCTTGAAAGAGCTGTGGACTTGATCCGCTCA ATGCCCTTTGAACCACATCCTTCTGCATATGGAACCTTATTGGCTGCTTGTAGAGTTTAT AAGAACTTGGAGTTTGCTGAGCTTGCGGCTGGAAAACTGATTGAAAAGGATCCACAGAGC GCAGGTGCCTATGTACAACTTGCAAATATCTATGCTGGCGCAAATCAGTGGGATGATGTC TCTAGAGTAAGGAGGTGGATGAAGGATAATGCAGTTGTGAAAACACCTGGGTATAGCTGG ATAGAGATTAAGGGTGTGATGCATGAGTTTAGATCAAATGACAGATTGCACCCTCAGCTT TACTTGATCCATGAAAAACTGGGCCAGTTAGCGGAGAGGATGAAGGCAATGGGTTATGTT CCAGATCTTGATTTTGTCCTGCATGATGTGGATGAAACTCTGAAGGTGCAGATGCTAATG AGGCACAGTGAGAAGCTTGCTATTTCTTTTGGTCTGATTAGTACTGCTCCTGGGATGACC TTGAGGATTTTCAAGAATCTCAGGGTTTGTGGAGACTGTCATAATGCAGCCAAGGTCATC TCCAAGATCGAGGATCGAGAAATCATTTTGAGGGATACTACACGATTCCACCATTTTAGA GGAGGGCATTGCTCATGTGGTGATTACTGGTGA

Peptide Sequence

PEP ID	Os08t0153600-00
PEP Infomation	pep chromosome:IRGSP-1.0:8:3082739:3086311:-1 gene:Os08g0153600 transcript:Os08t0153600-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os08t0153600-00)
Sequence	FIHQIPRSRIIESNGSRSSRTLSPPHELLTRVPQIPNHAANENPVTVLLFILAAAHRLRR FLLLLRRRRRRRAVSPPLRAGRPAPRPCARRRRDQEAEPPARRSPRPTAPSPVDAATSPD PCSLPVPNPDESSIAPPPASTTPPDHPPSPQSRQLLPSCESPIAQCGFVVAVIEPSHRRR LPLRPPAISPPPQSRRSPSRRHQTTATYNCLLAGYARALGRLADARHLFDRIPTPDAVSY NTLLSCHFASGDADGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMPVRNSV SWNAMVSGFACSRDMSAAEEWFRNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVR NLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQI HQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDG KEAINLFERMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSC MVDLLCRAGKLERAVDLIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQS AGAYVQLANIYAGANQWDDVSRVRRWMKDNAVVKTPGYSWIEIKGVMHEFRSNDRLHPQL YLIHEKLGQLAERMKAMGYVPDLDFVLHDVDETLKVQMLMRHSEKLAISFGLISTAPGMT LRIFKNLRVCGDCHNAAKVISKIEDREIILRDTTRFHHFRGGHCSCGDYW

Transcript Sequence

Transcript ID	Os08t0153600-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:3082739:3086311:-1 gene:Os08g0153600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os08t0153600-00)
Sequence	TTCATTCATCAAATCCCACGGTCCAGAATCATCGAATCCAACGGGTCGAGATCGTCGCGG ACCCTCTCCCCTCCGCACGAGCTCCTCACGCGCGTCCCCCAAATCCCCAATCACGCCGCC AATGAGAACCCCGTCACTGTCCTCCTCTTCATCCTCGCCGCGGCCCACCGCCTCCGCCGG TTCCTCCTCCTCCTCCGCCGCCGCCGCCGCCGCCGCGCAGTCTCGCCACCACTTCGCGCA GGGCGCCCAGCTCCTCGCCCGTGCGCGCGCCGCCGCAGGGACCAAGAAGCGGAGCCCCCC GCGCGGCGCTCGCCGAGGCCGACCGCGCCATCACCCGTCGACGCCGCCACCTCACCCGAC CCGTGCTCCCTCCCCGTCCCCAATCCCGACGAATCCTCCATCGCGCCGCCGCCGGCTTCC ACCACGCCCCCCGACCATCCCCCCTCTCCCCAATCCCGGCAGCTCCTCCCATCTTGCGAG TCACCGATCGCCCAATGCGGGTTTGTCGTTGCAGTGATCGAACCGTCGCACCGCCGCCGG CTTCCACTGCGCCCCCCAGCCATCTCTCCTCCTCCCCAATCCCGGCGGTCTCCGTCACGC CGCCATCAAACCACGGCCACCTACAACTGCCTCCTTGCCGGCTACGCCAGGGCGCTCGGC CGCCTCGCGGACGCACGCCACCTGTTCGACCGAATACCGACCCCGGATGCTGTCTCCTAC AACACGCTCCTCTCGTGCCACTTCGCCAGCGGCGACGCCGATGGCGCCCGGAGGCTCTTC GCATCGATGCCGGTCAGGGACGTCGTGTCCTGGAACACCATGGTGTCGGGGCTGTCCAAG AGTGGGGCCGTGGAGGAGGCCAAGGCCGTGTTCCTAGCAATGCCAGTGAGGAACTCCGTT TCCTGGAACGCCATGGTTTCCGGGTTCGCCTGCTCTAGAGACATGAGCGCGGCGGAGGAG TGGTTTAGGAATGCGCCGGAGAAGGGGGACGCCGTTCTGTGGACTGCGATGGTGTCGGGG TACATGGATATCGGCAATGTGGTGAAGGCCATCGAATACTTTGAGGCAATGCCAGTGAGG AACTTGGTTTCATGGAATGCTGTGGTTGCTGGGTATGTGAAGAATTCACATGCGGATGAT GCTTTGAGGCTGTTCAGGACCATGGTCAGGGAGGCCAATGTTCAGCCAAATGCATCGACG TTAAGCAGCGTGCTTCTTGGTTGCAGTAACTTGTCTGCACTTGGATTTGGTAAGCAGATA CATCAGTGGTGTATGAAGCTTCCGTTGAGTAGGAACTTGACGGTGGGCACGTCACTTGTG AGCATGTATTGCAAGTGTGGGGACTTGAGTAGCGCGTGCAAACTGTTTGGTGAAATGCAT ACGAGGGATGTGGTTGCGTGGAATGCTATGATATCTGGCTATGCTCAGCATGGAGATGGG AAGGAAGCTATCAATTTATTTGAAAGGATGAAGGATGAAGGAGTTGAGCCCAACTGGATT ACTTTTGTGGCAGTATTGACTGCTTGTATCCACACTGGCTTGTGTGATTTTGGAATACGG TGTTTCGAGGGAATGCAGGAATTGTACGGAATTGAGCCTCGGGTTGATCATTACTCATGC ATGGTGGATCTTCTCTGCAGAGCTGGTAAGCTTGAAAGAGCTGTGGACTTGATCCGCTCA ATGCCCTTTGAACCACATCCTTCTGCATATGGAACCTTATTGGCTGCTTGTAGAGTTTAT AAGAACTTGGAGTTTGCTGAGCTTGCGGCTGGAAAACTGATTGAAAAGGATCCACAGAGC GCAGGTGCCTATGTACAACTTGCAAATATCTATGCTGGCGCAAATCAGTGGGATGATGTC TCTAGAGTAAGGAGGTGGATGAAGGATAATGCAGTTGTGAAAACACCTGGGTATAGCTGG ATAGAGATTAAGGGTGTGATGCATGAGTTTAGATCAAATGACAGATTGCACCCTCAGCTT TACTTGATCCATGAAAAACTGGGCCAGTTAGCGGAGAGGATGAAGGCAATGGGTTATGTT CCAGATCTTGATTTTGTCCTGCATGATGTGGATGAAACTCTGAAGGTGCAGATGCTAATG AGGCACAGTGAGAAGCTTGCTATTTCTTTTGGTCTGATTAGTACTGCTCCTGGGATGACC TTGAGGATTTTCAAGAATCTCAGGGTTTGTGGAGACTGTCATAATGCAGCCAAGGTCATC TCCAAGATCGAGGATCGAGAAATCATTTTGAGGGATACTACACGATTCCACCATTTTAGA GGAGGGCATTGCTCATGTGGTGATTACTGGTGA