Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0152800-00
CDS Infomation

cds chromosome:IRGSP-1.0:8:3022668:3026892:-1 gene:Os08g0152800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os08t0152800-00)
Sequence

ATGGGGGAGGAGGAGGCGGCGGCGGCGGCGGCGAGGGTGGCGGAGCAGGCGAGGGAGCTG
CAGGACGCGGCGGCGGGCCTCCTGTCGAGGTCGTCGGCGGAGGAGGAGGCGCTCCGCCGC
CGCGCCGCCGCGCTCGGCGCCGAGCTCGCCAGGCTCCGCAAGGCCGCCGCCCACGCCGAC
AGCGACAAGGTTGAGGAGGACTTGGATCGAGCGACGTGCCTCATAAGCGATGGAGACATT
GCGGCGCTGCTCCCGAGCAAGACACATGGTACTTTCCTGAAGATGTTCCTGGGACCAGTA
AATCTGCGGGCACCGAGGAAGGAGGTGCAGCTCAAGGTGAAGGAAGAGTATAATAGCTAC
AGGGATAGGACTGCATTGCTTTTTCTTGGTTTCCCAATGATTCTGTTGGTACTCCGGTCA
TGGTTATGGAATGGATGCTTCCCAGTATTGCCAGTTCAGCTATACCAGGCTTGGTTGTTG
TTTCTGTATACAACTTTAGCTCTGCGAGAGAACATATTACGAGTTAATGGAAGTGATATC
CGTCCTTGGTGGATGTGCCATCACTATTGTGCCATGCTGATGTCTCTTATTAGTCTAACA
TGGGAGATAAAGGGACAACCTGATTGTTCTCGAAAACAGAGAGGCGTCGAGCTGTTTCTG
TGCTGGGCCATAATGCAAGGTTTCGCCATGATGTTGCAGAACAGATATCAACGCCAAAGA
CTATATACTCGGATTGCTTTAGGAAAGGCTAGAAGAATGGACGTTGTGTGGGGAGAGACT
GCTGGTGTTGAAGGTCAATTGTTGCTACTATGCCCTGTCCTCTTTCTGTTGCAGGGTTTT
GAGGGTTACGTTGGATTTTTACTTCTTCGTACTGCTCATACAGGCATCGTCCCTGAGTGG
CAGGTTGTGGTCTGTGGAGTCCTACTGATCGCAATGGCGATAGGTAATTTTGCAAATACA
GTGGACACGCTGATGGCCAAGTCCAGGTTCAAAGCAAAGAAGAGATCCAGGGGCAAACGG
GATCCTGACACATGCAACTCACCGACTGGCCTATCACCAACAAACTCAACTGCCAGAGCT
TGA

Peptide Sequence

PEP ID

Os08t0152800-00
PEP Infomation

pep chromosome:IRGSP-1.0:8:3022668:3026892:-1 gene:Os08g0152800 transcript:Os08t0152800-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os08t0152800-00)
Sequence

MGEEEAAAAAARVAEQARELQDAAAGLLSRSSAEEEALRRRAAALGAELARLRKAAAHAD
SDKVEEDLDRATCLISDGDIAALLPSKTHGTFLKMFLGPVNLRAPRKEVQLKVKEEYNSY
RDRTALLFLGFPMILLVLRSWLWNGCFPVLPVQLYQAWLLFLYTTLALRENILRVNGSDI
RPWWMCHHYCAMLMSLISLTWEIKGQPDCSRKQRGVELFLCWAIMQGFAMMLQNRYQRQR
LYTRIALGKARRMDVVWGETAGVEGQLLLLCPVLFLLQGFEGYVGFLLLRTAHTGIVPEW
QVVVCGVLLIAMAIGNFANTVDTLMAKSRFKAKKRSRGKRDPDTCNSPTGLSPTNSTARA

Transcript Sequence

Transcript ID

Os08t0152800-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:3022668:3026892:-1 gene:Os08g0152800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os08t0152800-00)
Sequence

CCTCTCCTCCTCCCTTCGTCGGCGTGGGCCCCACCTGTCAGCCTCTGGCCCCCGCCTCCA
CCACCACCTCCTCTCTCTCTATAGAGGAGAGAGAGAGAAAGCGAGGCGCGCGAGCAGTGT
AGAGAGAGAGAGAGAGAGGCGGCGAGATGGGGGAGGAGGAGGCGGCGGCGGCGGCGGCGA
GGGTGGCGGAGCAGGCGAGGGAGCTGCAGGACGCGGCGGCGGGCCTCCTGTCGAGGTCGT
CGGCGGAGGAGGAGGCGCTCCGCCGCCGCGCCGCCGCGCTCGGCGCCGAGCTCGCCAGGC
TCCGCAAGGCCGCCGCCCACGCCGACAGCGACAAGGTTGAGGAGGACTTGGATCGAGCGA
CGTGCCTCATAAGCGATGGAGACATTGCGGCGCTGCTCCCGAGCAAGACACATGGTACTT
TCCTGAAGATGTTCCTGGGACCAGTAAATCTGCGGGCACCGAGGAAGGAGGTGCAGCTCA
AGGTGAAGGAAGAGTATAATAGCTACAGGGATAGGACTGCATTGCTTTTTCTTGGTTTCC
CAATGATTCTGTTGGTACTCCGGTCATGGTTATGGAATGGATGCTTCCCAGTATTGCCAG
TTCAGCTATACCAGGCTTGGTTGTTGTTTCTGTATACAACTTTAGCTCTGCGAGAGAACA
TATTACGAGTTAATGGAAGTGATATCCGTCCTTGGTGGATGTGCCATCACTATTGTGCCA
TGCTGATGTCTCTTATTAGTCTAACATGGGAGATAAAGGGACAACCTGATTGTTCTCGAA
AACAGAGAGGCGTCGAGCTGTTTCTGTGCTGGGCCATAATGCAAGGTTTCGCCATGATGT
TGCAGAACAGATATCAACGCCAAAGACTATATACTCGGATTGCTTTAGGAAAGGCTAGAA
GAATGGACGTTGTGTGGGGAGAGACTGCTGGTGTTGAAGGTCAATTGTTGCTACTATGCC
CTGTCCTCTTTCTGTTGCAGGGTTTTGAGGGTTACGTTGGATTTTTACTTCTTCGTACTG
CTCATACAGGCATCGTCCCTGAGTGGCAGGTTGTGGTCTGTGGAGTCCTACTGATCGCAA
TGGCGATAGGTAATTTTGCAAATACAGTGGACACGCTGATGGCCAAGTCCAGGTTCAAAG
CAAAGAAGAGATCCAGGGGCAAACGGGATCCTGACACATGCAACTCACCGACTGGCCTAT
CACCAACAAACTCAACTGCCAGAGCTTGATATGGATCCGGGGAAAAAAATTCTCCATTCT
ATGAACATTTCCCATGTTCAAGCAGGGCTTGTTACTACCATTGTAAAGCATTAGTTTCTT
GGCCACCAGCTCCTAGTCCTGACTGTCTCTGTCAAAGATCATACTCATGTAATCAGCTGA
TGATTAGGTTGCTGATGGTCTCAGGTTGAGGTAATCAAGAATAAACTGCTCATGTTTTGT
GTATTTTTTTTCTTTTGTTCTGAACATCAGCCATCAGGTGGACTAGATGAACTTAGGACT
GTAACATGTAGCAAAATTTTCCCAGTATAGTTATTGTGAGATTTGCAATGTCAGAACCAA
ACATGTGAAGTTGTGCATTAGCATGTGGCCTATCCTGTTCTCTTCTCATG