Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0151700-01
CDS Infomation

cds chromosome:IRGSP-1.0:8:2972601:2976414:1 gene:Os08g0151700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os08t0151700-01)
Sequence

ATGACCGGCGCCGCCGCATGGCCGGTCTGCACCATCTGCTACGAGGACCTCCGCCCGCTC
TCCGACCAGCACCTCCACTGCCTCCCCGCCTGCGGCCACGTCTTCCACGCCCTCTGTTTG
GAGCAATGGCTGGAGTACTGCCCGGGCGGGAAGAAGAAGCTCACCTGCCCCATCTGCAAG
CAGCCATGCGGCGCCGCCCACCCACCGACCCGCCTCTTCTTCCAATCCACCGGCGCGTGC
CCCACGCAGACCGCCTCCTCCTCCCCCTCGCGGCACGAGCCCACCGATGGCGGCGCCGAC
CGGGATGAGCTCGCCGCCGAGGTCGCGCGGCTGGAGCAGAAGGCCGCCTCCCTCGGCAGG
GTGCTCGACGAGCAGCGCGACGGGATCCAGAAGCTCAACGCCGAGGTTGCTATGTGGAGG
GAGAAGGCGGCCGAGGCGGAGGTGATGAAGGAATCGGTCAGGAGGGAGAAAGAATGTGTT
CAGCATCTGCTCAATGCGAAAACAGAGGAATTGTCAAGGAAGTCATCAGAATGTGGCAGG
TTGCAGGAGAAGGGCCTCTCATTGGCGAAGGAACTTGCAGCATTGAAGCTGTCGACAGAT
ATGAACCTTCAGGAGGAAGAGATCCTTAAGTTGGCATCACTTGGTAACCATGGAAATGCT
GCGAATGCGGTTGATGTTTTGACGAGATCTCTTGCTCTTCGGAACAAGAGCTACAAAGAA
TTGATGATCCAATGCAATGTTCTGGGAAGATCAGAATCTCGTTCCCAGCAGAGGTTTGAG
AAGGCAAAAGAACTCATTAAGAAGTTAAAGGCAAGAGTACAAGACCTTGAGAAGGAACAA
GAAGAAAAAGAAAATGGTGTGATTAGGGACCTGAGGTCTGCAAAGAAATTTAAAGCTGAC
CAGACAAATTCAGGAAATACCACAGTTAATAATGGTTTCTCGGGTCTTGCTGCTGGATGT
GGAGATTATCCGATGAAGCTCGATGAAGTGGTGCAGGATCCATGCGACAAGCCTGGGCCA
TCACCTGAAGCTAAAAATGACCTGAATATAAAAGACAAAATGGACGACAAGCATGCGGAT
GTGATTGACTTAGATGCTGATGATTCTGTCTTCCAACATGAACACAAGAAAGGACTTTCT
GCCAAACCATTTGGGAACGATGGTAACGATTTGGATTTCAAAAGTCGGTCTAGTCTTCAA
GAACATTATAGGAAGGAATCCATAACATGCAAGACATATGTAGCAGAGGAAAATTCCTTT
CTAAAACCTTCCATGGTAACTGAAAGATCAGCACTTCAGGAGAGCTTTACCACAAACAAA
CTTCAAAGCTTTCAAGAAACTCCTGTTCTAAGAAGTATGAAAGCTACAACTTCGACATGG
GAGAAAGAAACACTGACGATTGATGGCATCTCTAAACAAGCTACTAGAATGGCTCCTGGC
ACTGGACCCCAGCAGGTTCACAATTTCAATTCTCTTTCAGATGACTTCCAAATACCAATT
AGAAATCTTGGTGGAGAGGGAACAGGAAAAAGCGTCGGCAAATGGTGCAAGGGCGTAGCT
ACCCCTGGATCTCTCAACACAAATGCAAATAAAAGGAATCTGATCGCCGTAGGGCCAGAC
GGACGTGGGGGAAAGGTCAAAATTTTGAGAGATCTTGGCAAATTCCAAGATAGCAAGACT
CAAGCACTATGGCCTAAGGCACAGAAGGTTGGAAGCAGAGGTGGGCAATCTCAGATAGAT
CATTTCTTTGGGAAGAGATGA

Peptide Sequence

PEP ID

Os08t0151700-01
PEP Infomation

pep chromosome:IRGSP-1.0:8:2972601:2976414:1 gene:Os08g0151700 transcript:Os08t0151700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os08t0151700-01)
Sequence

MTGAAAWPVCTICYEDLRPLSDQHLHCLPACGHVFHALCLEQWLEYCPGGKKKLTCPICK
QPCGAAHPPTRLFFQSTGACPTQTASSSPSRHEPTDGGADRDELAAEVARLEQKAASLGR
VLDEQRDGIQKLNAEVAMWREKAAEAEVMKESVRREKECVQHLLNAKTEELSRKSSECGR
LQEKGLSLAKELAALKLSTDMNLQEEEILKLASLGNHGNAANAVDVLTRSLALRNKSYKE
LMIQCNVLGRSESRSQQRFEKAKELIKKLKARVQDLEKEQEEKENGVIRDLRSAKKFKAD
QTNSGNTTVNNGFSGLAAGCGDYPMKLDEVVQDPCDKPGPSPEAKNDLNIKDKMDDKHAD
VIDLDADDSVFQHEHKKGLSAKPFGNDGNDLDFKSRSSLQEHYRKESITCKTYVAEENSF
LKPSMVTERSALQESFTTNKLQSFQETPVLRSMKATTSTWEKETLTIDGISKQATRMAPG
TGPQQVHNFNSLSDDFQIPIRNLGGEGTGKSVGKWCKGVATPGSLNTNANKRNLIAVGPD
GRGGKVKILRDLGKFQDSKTQALWPKAQKVGSRGGQSQIDHFFGKR

Transcript Sequence

Transcript ID

Os08t0151700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:2972601:2976414:1 gene:Os08g0151700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os08t0151700-01)
Sequence

GGCTTCTTTTCCCCTCCTCTCCCAAATCCAACCACAAGAAGAGGAGGAGGAGGCCACCGT
TCGCATCCGCCGGATGCCACCGCCGCCGACGACGACGACGCCGCCATGACCGGCGCCGCC
GCATGGCCGGTCTGCACCATCTGCTACGAGGACCTCCGCCCGCTCTCCGACCAGCACCTC
CACTGCCTCCCCGCCTGCGGCCACGTCTTCCACGCCCTCTGTTTGGAGCAATGGCTGGAG
TACTGCCCGGGCGGGAAGAAGAAGCTCACCTGCCCCATCTGCAAGCAGCCATGCGGCGCC
GCCCACCCACCGACCCGCCTCTTCTTCCAATCCACCGGCGCGTGCCCCACGCAGACCGCC
TCCTCCTCCCCCTCGCGGCACGAGCCCACCGATGGCGGCGCCGACCGGGATGAGCTCGCC
GCCGAGGTCGCGCGGCTGGAGCAGAAGGCCGCCTCCCTCGGCAGGGTGCTCGACGAGCAG
CGCGACGGGATCCAGAAGCTCAACGCCGAGGTTGCTATGTGGAGGGAGAAGGCGGCCGAG
GCGGAGGTGATGAAGGAATCGGTCAGGAGGGAGAAAGAATGTGTTCAGCATCTGCTCAAT
GCGAAAACAGAGGAATTGTCAAGGAAGTCATCAGAATGTGGCAGGTTGCAGGAGAAGGGC
CTCTCATTGGCGAAGGAACTTGCAGCATTGAAGCTGTCGACAGATATGAACCTTCAGGAG
GAAGAGATCCTTAAGTTGGCATCACTTGGTAACCATGGAAATGCTGCGAATGCGGTTGAT
GTTTTGACGAGATCTCTTGCTCTTCGGAACAAGAGCTACAAAGAATTGATGATCCAATGC
AATGTTCTGGGAAGATCAGAATCTCGTTCCCAGCAGAGGTTTGAGAAGGCAAAAGAACTC
ATTAAGAAGTTAAAGGCAAGAGTACAAGACCTTGAGAAGGAACAAGAAGAAAAAGAAAAT
GGTGTGATTAGGGACCTGAGGTCTGCAAAGAAATTTAAAGCTGACCAGACAAATTCAGGA
AATACCACAGTTAATAATGGTTTCTCGGGTCTTGCTGCTGGATGTGGAGATTATCCGATG
AAGCTCGATGAAGTGGTGCAGGATCCATGCGACAAGCCTGGGCCATCACCTGAAGCTAAA
AATGACCTGAATATAAAAGACAAAATGGACGACAAGCATGCGGATGTGATTGACTTAGAT
GCTGATGATTCTGTCTTCCAACATGAACACAAGAAAGGACTTTCTGCCAAACCATTTGGG
AACGATGGTAACGATTTGGATTTCAAAAGTCGGTCTAGTCTTCAAGAACATTATAGGAAG
GAATCCATAACATGCAAGACATATGTAGCAGAGGAAAATTCCTTTCTAAAACCTTCCATG
GTAACTGAAAGATCAGCACTTCAGGAGAGCTTTACCACAAACAAACTTCAAAGCTTTCAA
GAAACTCCTGTTCTAAGAAGTATGAAAGCTACAACTTCGACATGGGAGAAAGAAACACTG
ACGATTGATGGCATCTCTAAACAAGCTACTAGAATGGCTCCTGGCACTGGACCCCAGCAG
GTTCACAATTTCAATTCTCTTTCAGATGACTTCCAAATACCAATTAGAAATCTTGGTGGA
GAGGGAACAGGAAAAAGCGTCGGCAAATGGTGCAAGGGCGTAGCTACCCCTGGATCTCTC
AACACAAATGCAAATAAAAGGAATCTGATCGCCGTAGGGCCAGACGGACGTGGGGGAAAG
GTCAAAATTTTGAGAGATCTTGGCAAATTCCAAGATAGCAAGACTCAAGCACTATGGCCT
AAGGCACAGAAGGTTGGAAGCAGAGGTGGGCAATCTCAGATAGATCATTTCTTTGGGAAG
AGATGATCCTGCTGCGCAAGCTATGCTAATATATACCACTTTCAAACTCTTGCCTCTGTT
GCTGCGGTCAAATTCTGTTTGGAGAACTATTTGATGTCCTGCATCTGTACTTGTGTAGAA
TCCATTGCACTTAAGGTGAAAGCTGAATCCAAATTTCGCAGTGTCATCACTATTGGGCCT
GAGGGGATAGATAGAGCTTGTAAACAATGAGCTGTGTAGGAAACCTGAATTCCTCTGTTC
CTCAGAGGCTCAGGTGGTCATGTGTACCACATTGCTAAACATTGTGTATTGATAGAGCTG
AGGAGATAACAGGTGGCTTAGCTCACTTGATCCACATGCAAATACATTGCAAGCTGCCCT
TTGGCTAAGTCTGAAACCTATTTGGGTTTCATTGTACTGCCAACTACTCCAGCAAAGCAA
AGCTGGGAATCACAAGAAAGTTGGACACTGGGTTG