Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0151000-00
CDS Infomation

cds chromosome:IRGSP-1.0:8:2934798:2940214:1 gene:Os08g0151000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Myb-like DNA-binding domain, SHAQKYF class family protein. (Os08t0151000-00)
Sequence

ATGCCTCAAGATTCGCGCCCCGCCGCGATGCGCCTCTTCGGCGTCACCATCTCGCCGCCG
CCGCCGCCGCCGGAGCCGGAGCCGGAGCCGGATCCGTCCGACCCCCGGGATCCGAGCCCG
CGGCCGGCGAGGGAGGACGCGATGCGCAAGTGCAAGAGCATGGGCAACCTCGCCGCCGCC
GCCGCCGCCTCCTCCGCCGCAGCCGGCGGCGGCGGCGCCGGGGACGCCGGGGGATCGGGC
GACGGGTACCTCTCCGACGGTGGGCTGCTGCTGTCCTCCGGCAAGCGGCGGCGCGCGCAG
GAGAGGAAGAAAGCTGTCCCTTGGACTGAAGAAGAGCACCGAACATTTCTTGCTGGTCTT
GAAAAGCTAGGAAAGGGGGACTGGAGGGGTATATCTAAGAACTTTGTTACTACCAGGACT
CCAACTCAAGTGGCTAGTCATGCTCAGAAATATTTTCTTAGACAAACTAATCCAAACAAG
AAGAAGCGCAGATCAAGCCTTTTTGATATGATGGCAACTGATATGTCACCAGCACCAAAC
TGCCCTGTCTTGCCACCATCAATGGGAAAATTACATGATATGGTAGCTATGACTAAACAA
CTCCAGAACAGCAGTTTGGAAGGAGTCTCATCTTCAAGCACAGTTAATCTAGCACCACAA
GTTGCAAGAGATCTTCCTCCCCCAATTCCATCTTTTAAAGCAACAAATGTAGATTCAAGT
CTCAGCAAAATGAACCACATGGACGGTTTCTTGAGGGCGCCCATGCTGTTCAGACCAATT
CCAAGAATCGCTGAAGGGGCATCTTCATCGACTCCTGCAACTGCAAGCATAGCTGATCTG
GAATTTCAAGCTAACCTGACTGCATGTTCTAATGCATTATTCGCGAGTCCGAGAAGAAAG
CCAAAGAAGGCAGATCCTCCAGCAGAGAAGGATCTGGATCTGACAGTTGCCCCACCCTCC
CAACAAACCAGGGCCAGTATTTCTTCCCAGAACGCAGTAGGCGTAATTCAAGTCGTATAG

Peptide Sequence

PEP ID

Os08t0151000-00
PEP Infomation

pep chromosome:IRGSP-1.0:8:2934798:2940214:1 gene:Os08g0151000 transcript:Os08t0151000-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Myb-like DNA-binding domain, SHAQKYF class family protein. (Os08t0151000-00)
Sequence

MPQDSRPAAMRLFGVTISPPPPPPEPEPEPDPSDPRDPSPRPAREDAMRKCKSMGNLAAA
AAASSAAAGGGGAGDAGGSGDGYLSDGGLLLSSGKRRRAQERKKAVPWTEEEHRTFLAGL
EKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRQTNPNKKKRRSSLFDMMATDMSPAPN
CPVLPPSMGKLHDMVAMTKQLQNSSLEGVSSSSTVNLAPQVARDLPPPIPSFKATNVDSS
LSKMNHMDGFLRAPMLFRPIPRIAEGASSSTPATASIADLEFQANLTACSNALFASPRRK
PKKADPPAEKDLDLTVAPPSQQTRASISSQNAVGVIQVV

Transcript Sequence

Transcript ID

Os08t0151000-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:2934798:2940214:1 gene:Os08g0151000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Myb-like DNA-binding domain, SHAQKYF class family protein. (Os08t0151000-00)
Sequence

TCTCCCCAATAAAAACGCCACCGCCCAACCCCGTCGGAGCGGCGGCCGTCGGGATATGCC
TCAAGATTCGCGCCCCGCCGCGATGCGCCTCTTCGGCGTCACCATCTCGCCGCCGCCGCC
GCCGCCGGAGCCGGAGCCGGAGCCGGATCCGTCCGACCCCCGGGATCCGAGCCCGCGGCC
GGCGAGGGAGGACGCGATGCGCAAGTGCAAGAGCATGGGCAACCTCGCCGCCGCCGCCGC
CGCCTCCTCCGCCGCAGCCGGCGGCGGCGGCGCCGGGGACGCCGGGGGATCGGGCGACGG
GTACCTCTCCGACGGTGGGCTGCTGCTGTCCTCCGGCAAGCGGCGGCGCGCGCAGGAGAG
GAAGAAAGCTGTCCCTTGGACTGAAGAAGAGCACCGAACATTTCTTGCTGGTCTTGAAAA
GCTAGGAAAGGGGGACTGGAGGGGTATATCTAAGAACTTTGTTACTACCAGGACTCCAAC
TCAAGTGGCTAGTCATGCTCAGAAATATTTTCTTAGACAAACTAATCCAAACAAGAAGAA
GCGCAGATCAAGCCTTTTTGATATGATGGCAACTGATATGTCACCAGCACCAAACTGCCC
TGTCTTGCCACCATCAATGGGAAAATTACATGATATGGTAGCTATGACTAAACAACTCCA
GAACAGCAGTTTGGAAGGAGTCTCATCTTCAAGCACAGTTAATCTAGCACCACAAGTTGC
AAGAGATCTTCCTCCCCCAATTCCATCTTTTAAAGCAACAAATGTAGATTCAAGTCTCAG
CAAAATGAACCACATGGACGGTTTCTTGAGGGCGCCCATGCTGTTCAGACCAATTCCAAG
AATCGCTGAAGGGGCATCTTCATCGACTCCTGCAACTGCAAGCATAGCTGATCTGGAATT
TCAAGCTAACCTGACTGCATGTTCTAATGCATTATTCGCGAGTCCGAGAAGAAAGCCAAA
GAAGGCAGATCCTCCAGCAGAGAAGGATCTGGATCTGACAGTTGCCCCACCCTCCCAACA
AACCAGGGCCAGTATTTCTTCCCAGAACGCAGTAGGCGTAATTCAAGTCGTATAGACTGA
TAATTTTTTTTGGGGAGTTTTAACTATGTTGTTGAATGTTTACAAAAATAAACATTAACA
TTATATTAGCGATACACCAATAAAAGAAGGAATTAAAGATTATGTGCTCCGAATCGTTGT
ATGCTCCCTTCATTTCATTTCTGCCTCCTTTTTTCTGGCCACACAATCAAGTTCATGTGG
AGCCTATATATTTTTGCAGCTTTCATGTCCCTTCT