Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0144400-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:2507299:2514517:-1 gene:Os08g0144400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Deg protease 11, DEG PROTEASE 11 description:PDZ/DHR/GLGF domain containing protein. (Os08t0144400-01);Hypothetical conserved gene. (Os08t0144400-02)
Sequence	ATGCCACCCAAACTGAGGTCGTCGAAGGGGGTGGCGCCATCCCCTTCCACCGGCGAGGGT GGAGAAAGCCACACATCGAAAAAGAATCCCGCTCCGGCTACGGCTCCCACCGCCGGAAGT GTTACTCGATCTAGAGCGAGGGATACTACTGAGCGCGCTAGAGCTAGTGGCGGGGGCACG GCACTGGATCCGAAGAAGAGAAAGAGGACAGAAGAGTCAGCGGCGTCATCAGCAGCGGCG GCAGGTCCGGTTCCGAAGAAGATGACCACCGCCGGTAGTACGACCTTGGCCTCCCGGCCG CTCCCTCTTCGCTACCCGCCTTATCCCACCTTACCACCGGGGACTCGTCCTACCAGCAGA CAATATTTGGATCCCGTCCTTGACAGAAAATATTTGGATTCCGTTCTTGAGTGGGCCAAG GAGCGCCGCCGGATCGCCAAACTCTCCAAGAAAGCTCAATGTAAAGATATCCCCACTCTC AGGCATTCGCCCATGGATCCCATCACTGCAGATGCCGTCGTCACATCACAAGACAAGGCC ATGGTGCTGCGTGTGGCTCGCTCCGTTGTCAGTGTTTCATCCACAATGCCTGATGGGGGT GGATTGATTTCCCGGTGCACTGGCGTCGTAATCGGTTGGGATGGGGCTAACAAACGTGCC AAGATCCTCACTGCTGCTTCTGTTGTTTGTGACTTCCATGGTGAATTGCATAACCCAGCA CTCAAGCTATCCGTCAGTATGCCAAATAAGACAACAACAGAAGGAAGGTTGTTGTTCTAC AATGTGCACTATGGTATTGCTCTTTTGGAAGTCATGGGAGACTACAAGTTGGAGGTCCCT TCTTTTGGATCGGGCACAAACTACGGTCAGGTCATATTTGCATTGGGTAGGGGTGAAAAC ATGTCTTTAATGGTTAGCCATGGAACAATTTCATGGACAGATTACCCTGTGTTATTGAGG AACCACAATATGTTTCTGAGCTGTGATATTCCTGAGGGTGGTTCAGGAGGGCCGGTGGTT GACCATGGTGGCAATATGATTGGGATTGCATTTGTAGAAAATCCGGGTCCGGTCTTTATC TCTATCAAGACAATCATGACTTGCATGGAGATGTGGGATCAGTTTAGCCGTGTTGCTCGC CCCTTGCTTGGCATGCAATTGAAGTCAGTGGAACTACTGGATGTCTCCATTCAGGAGGAA CTCTGTCGTGACTATAATATCACCAGTGGTTTCATTGTGAGTCAGGTGCTCGTTGATTCT ACTGCTGAAAAGCTTGGTATTAGACGAGGGGACGTGATTGATTTTCAGGATATTGATTGT TCTACTTTATCCCAGTTAGAAGACCACCTCCTTTCTCTTGGTTGGGGATACCTGAAAGGG ATGCATTTGACAGTCGATCTGAAGGTTGAAGTTCATAATCTCTTCGACTCATATAGGGAA AGTATTACTTTCCCTGTACAGTTCACTGATGCTTCTAAGCAGGTAAACTAG

Peptide Sequence

PEP ID	Os08t0144400-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:2507299:2514517:-1 gene:Os08g0144400 transcript:Os08t0144400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Deg protease 11, DEG PROTEASE 11 description:PDZ/DHR/GLGF domain containing protein. (Os08t0144400-01);Hypothetical conserved gene. (Os08t0144400-02)
Sequence	MPPKLRSSKGVAPSPSTGEGGESHTSKKNPAPATAPTAGSVTRSRARDTTERARASGGGT ALDPKKRKRTEESAASSAAAAGPVPKKMTTAGSTTLASRPLPLRYPPYPTLPPGTRPTSR QYLDPVLDRKYLDSVLEWAKERRRIAKLSKKAQCKDIPTLRHSPMDPITADAVVTSQDKA MVLRVARSVVSVSSTMPDGGGLISRCTGVVIGWDGANKRAKILTAASVVCDFHGELHNPA LKLSVSMPNKTTTEGRLLFYNVHYGIALLEVMGDYKLEVPSFGSGTNYGQVIFALGRGEN MSLMVSHGTISWTDYPVLLRNHNMFLSCDIPEGGSGGPVVDHGGNMIGIAFVENPGPVFI SIKTIMTCMEMWDQFSRVARPLLGMQLKSVELLDVSIQEELCRDYNITSGFIVSQVLVDS TAEKLGIRRGDVIDFQDIDCSTLSQLEDHLLSLGWGYLKGMHLTVDLKVEVHNLFDSYRE SITFPVQFTDASKQVN

Transcript Sequence

Transcript ID	Os08t0144400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:2507299:2514517:-1 gene:Os08g0144400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Deg protease 11, DEG PROTEASE 11 description:PDZ/DHR/GLGF domain containing protein. (Os08t0144400-01);Hypothetical conserved gene. (Os08t0144400-02)
Sequence	GTGTAAAAAAAAAAGAAAAGAAACCTAGCTCCGCCTCCGCCGCCGCCGCCGCCGCCGCCG CCGCAACTCGAGCGGCGAATCGGCGATGCCACCCAAACTGAGGTCGTCGAAGGGGGTGGC GCCATCCCCTTCCACCGGCGAGGGTGGAGAAAGCCACACATCGAAAAAGAATCCCGCTCC GGCTACGGCTCCCACCGCCGGAAGTGTTACTCGATCTAGAGCGAGGGATACTACTGAGCG CGCTAGAGCTAGTGGCGGGGGCACGGCACTGGATCCGAAGAAGAGAAAGAGGACAGAAGA GTCAGCGGCGTCATCAGCAGCGGCGGCAGGTCCGGTTCCGAAGAAGATGACCACCGCCGG TAGTACGACCTTGGCCTCCCGGCCGCTCCCTCTTCGCTACCCGCCTTATCCCACCTTACC ACCGGGGACTCGTCCTACCAGCAGACAATATTTGGATCCCGTCCTTGACAGAAAATATTT GGATTCCGTTCTTGAGTGGGCCAAGGAGCGCCGCCGGATCGCCAAACTCTCCAAGAAAGC TCAATGTAAAGATATCCCCACTCTCAGGCATTCGCCCATGGATCCCATCACTGCAGATGC CGTCGTCACATCACAAGACAAGGCCATGGTGCTGCGTGTGGCTCGCTCCGTTGTCAGTGT TTCATCCACAATGCCTGATGGGGGTGGATTGATTTCCCGGTGCACTGGCGTCGTAATCGG TTGGGATGGGGCTAACAAACGTGCCAAGATCCTCACTGCTGCTTCTGTTGTTTGTGACTT CCATGGTGAATTGCATAACCCAGCACTCAAGCTATCCGTCAGTATGCCAAATAAGACAAC AACAGAAGGAAGGTTGTTGTTCTACAATGTGCACTATGGTATTGCTCTTTTGGAAGTCAT GGGAGACTACAAGTTGGAGGTCCCTTCTTTTGGATCGGGCACAAACTACGGTCAGGTCAT ATTTGCATTGGGTAGGGGTGAAAACATGTCTTTAATGGTTAGCCATGGAACAATTTCATG GACAGATTACCCTGTGTTATTGAGGAACCACAATATGTTTCTGAGCTGTGATATTCCTGA GGGTGGTTCAGGAGGGCCGGTGGTTGACCATGGTGGCAATATGATTGGGATTGCATTTGT AGAAAATCCGGGTCCGGTCTTTATCTCTATCAAGACAATCATGACTTGCATGGAGATGTG GGATCAGTTTAGCCGTGTTGCTCGCCCCTTGCTTGGCATGCAATTGAAGTCAGTGGAACT ACTGGATGTCTCCATTCAGGAGGAACTCTGTCGTGACTATAATATCACCAGTGGTTTCAT TGTGAGTCAGGTGCTCGTTGATTCTACTGCTGAAAAGCTTGGTATTAGACGAGGGGACGT GATTGATTTTCAGGATATTGATTGTTCTACTTTATCCCAGTTAGAAGACCACCTCCTTTC TCTTGGTTGGGGATACCTGAAAGGGATGCATTTGACAGTCGATCTGAAGGTTGAAGTTCA TAATCTCTTCGACTCATATAGGGAAAGTATTACTTTCCCTGTACAGTTCACTGATGCTTC TAAGCAGGTAAACTAGAGTTGAAGAGGTGCTGCAAGGGATTGAAGTTGCCTAGAGTAATA TGACTGACCAAGGGGAGGGATGTCTACTTGTGCCTTTTGGATAATCTGGCAACCTCATTG TGCTTTTGGGACAATTTGGCACGTCTTACCAGCGATGCAACCTCATTCCTCTAAATGGTT GTGCTGATATAGTTTTGGATGAGATTTTGTAAAGATAGTGTTACTGCGCCTCTTACGCTC TTAACAGAAAACCATGCCCCTCCGTATATATAGCAAGGTCAGATTAGCGCCATAAACTGA ATCTAAACTTTGTTTTTGATGAACTCAGACACACACAATCAACACATTACAGTCGCGTGG GCCCACGAATGTGCCCTCAACGACGTGCTGCTACTATATCATCAGTATTCAGTACTTCCT CCGTTTCACAATGTTGAAATTAAAGACGAAGCCGTTGATCACACTCGAAGACTAAACAGG TGCAACCTGTGAAGAACACCAAAAGGTTGGAAGGAGACCATCAAGACGGTGATCCCGACG GCGACGCCCGGCCGGGATCAAGTGGATTGGTAATTTTGGTGAGATCTGAACAAGTGCATG GTCACTTACTTTCATCTCCAAATGGGCGGCGTAAGAAGTATGTACTTGGTCTTGTTCTTC ACCTGTATATTTATTTTTGTTGTCCAATCAATCTTCCACGTTTTCTGAATAATGAAATCT GGGAGATCAATTTGCCGCGAAGAATTAGCACTTTTAATCACAAAAGGCTATCTGCCTATA TGCTC