Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0144100-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:2495080:2496009:1 gene:Os08g0144100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CALMODULIN-LIKE PROTEIN 32 description:Similar to Avr9/Cf-9 rapidly elicited protein 31. (Os08t0144100-01)
Sequence	ATGGACGCGAAGCAGAGCGTGGCGGCGGCGAAGCCGTCGCTGGCGAAGAAGACGGCGTCG GCGTCGTTCCGGCTGAGGAACGGCAGCCTGAACGCGGTGCGGCTGCGCCGCGTGTTCGAC CTGTTCGACCGCAACGGCGACGGCGAGATCACCGTGGACGAGCTGGCGCAGGCGCTCGAC GCGCTGGGCCTCGTCGCCGACCGCGACGGCCTCGCCGCCACCGTCTCCGCCTACGTCCCC GAGGGCGCCGCGGGCCTCCGCTTCGAGGACTTCGACGCGCTCCACCGCGCGCTCGGCGAC GCCCTCTTCGGCTCGCTCGACGGCGCCGCCGCCGCCGGCGAGCCCGGCGGCGGCGGCGGC GACGAGGAGGAGGAGATGCGGGAGGCGTTCAAGGTGTTCGACGTCGACGGCGACGGGTTC ATCTCGGCGTCGGAGCTCCAGGAGGTGCTCAAGAAGCTCGGCCTCCCGGAGGCCGGCAGC CTCGCCACCGTGCGGGAGATGATCTGCAACGTCGACCGCAACAGCGACGGCCGCGTCGAC TTCGGCGAGTTCAAGTCCATGATGCAGGGCATCACCGTCTGGGGCCCCTGA

Peptide Sequence

PEP ID	Os08t0144100-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:2495080:2496009:1 gene:Os08g0144100 transcript:Os08t0144100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CALMODULIN-LIKE PROTEIN 32 description:Similar to Avr9/Cf-9 rapidly elicited protein 31. (Os08t0144100-01)
Sequence	MDAKQSVAAAKPSLAKKTASASFRLRNGSLNAVRLRRVFDLFDRNGDGEITVDELAQALD ALGLVADRDGLAATVSAYVPEGAAGLRFEDFDALHRALGDALFGSLDGAAAAGEPGGGGG DEEEEMREAFKVFDVDGDGFISASELQEVLKKLGLPEAGSLATVREMICNVDRNSDGRVD FGEFKSMMQGITVWGP

Transcript Sequence

Transcript ID	Os08t0144100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:2495080:2496009:1 gene:Os08g0144100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CALMODULIN-LIKE PROTEIN 32 description:Similar to Avr9/Cf-9 rapidly elicited protein 31. (Os08t0144100-01)
Sequence	GAGAGAGAGAGAATCCGCGCGCGCGAAAGGGAAGGCCTGATCGGATTCGAGCTGTGCCGG CGAGGAGAGGAGATATGGACGCGAAGCAGAGCGTGGCGGCGGCGAAGCCGTCGCTGGCGA AGAAGACGGCGTCGGCGTCGTTCCGGCTGAGGAACGGCAGCCTGAACGCGGTGCGGCTGC GCCGCGTGTTCGACCTGTTCGACCGCAACGGCGACGGCGAGATCACCGTGGACGAGCTGG CGCAGGCGCTCGACGCGCTGGGCCTCGTCGCCGACCGCGACGGCCTCGCCGCCACCGTCT CCGCCTACGTCCCCGAGGGCGCCGCGGGCCTCCGCTTCGAGGACTTCGACGCGCTCCACC GCGCGCTCGGCGACGCCCTCTTCGGCTCGCTCGACGGCGCCGCCGCCGCCGGCGAGCCCG GCGGCGGCGGCGGCGACGAGGAGGAGGAGATGCGGGAGGCGTTCAAGGTGTTCGACGTCG ACGGCGACGGGTTCATCTCGGCGTCGGAGCTCCAGGAGGTGCTCAAGAAGCTCGGCCTCC CGGAGGCCGGCAGCCTCGCCACCGTGCGGGAGATGATCTGCAACGTCGACCGCAACAGCG ACGGCCGCGTCGACTTCGGCGAGTTCAAGTCCATGATGCAGGGCATCACCGTCTGGGGCC CCTGATCTCCACCAATCCCTTCAAACATCTTTTGAATTCCATCCAAATTTCAACCAAACA CGCACGCGCGCAGTCCAAATTGAATCAAACTGAACATCACTAGGTTAACTCAATATATTT ATCTCATGCAATTACATCACTGTATGTACATGTGACAAAGCAGGGCCTGAGCTTTGTTGC TATGGCCTGTTTTGTGTTTAAAAAAATTTTAAATTCTACTCGAACAGGATTCTTTTCAAG TGTTTCTACGGTAATTGAACGGTTGCATGC