Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0143300-00
CDS Infomation	cds chromosome:IRGSP-1.0:8:2382108:2385161:1 gene:Os08g0143300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:acyl-CoA synthetase 3 description:AMP-dependent synthetase and ligase domain containing protein. (Os08t0143300-00)
Sequence	ATGCAGCGCGACGCGATCGCCGCCGCCCGGAACGCCGGCTGCTCGAGCGGCCGCATCTCG CAGCCGCCGCCGCCGCCGTTCTACTCCGCCGCCACCGGAATCTACAGCAGCATCCACCCT CCCGTGGCGCTCCCCACCGACCCCTCCCTCACCCTCGTCGCCCACCTCTTCGCCCGCCTC CCCCTCGCCGACCCGGGCGCCCCCACCCTCGTCGACGCCGCCACCGCGTCCGCGGTGTCC CGCGCCGACCTCCGCCGCCTCGTCGCCTCCCTCGCCGCGGGGCTCCGCCGCCGCCATGGC GTTCGGAAGGGGTCCGTTGTGCTGCTGCTCCTCCCGAACTCCGTCGCGTTCCCCGTCTCG TTCCTCGCCGTGCTCGCCGCCGGCGCCGTCGCCACCACCATGAACCCCTCCAGCTCCCCC GCCGAGATTGCCGCCCAGGCGCGGGCCACCGGCGCATGCCTCGTCCTCGCCTCGCGCGAC GGCGCCGCGAGGCTCCCGCCTCTCGCTGCCCCCGTCGTCCTCGTGCCCGAAATCCTGGAC CATTCCGCCGCGGCCGACGACGGCGACGACGACCAACGCGTGTTCGCCGCGTTCCGCGCC ATGCTCGACGGCGGCGGCGGCGACGGCACCGAGACGGCGGTCCCGGTGGTGGGCCAGGAC GACGCGGTGGCCATCCTCTACTCGTCGGGGACGTCGGGGAGGAGCAAGGGGGTGGTGCTG ACGCACCGCAACCTGATCGCCATGACGGAGCTGTTCGTCCGGTTCGAGGCGTCGCAGTAC CACGCGCGAGGTGCTCGCGAAAATGTCTACATGGCGGCGCTGCCCATGTCCCACGTGTAC GGCCTCTCCCTCTTCGCCGTCGGCCTCCTCTCGATCGGTGCCACGGTGGTGGTGATGAGG AGATTCGACGCCGGCGACGCCGTCGCCGCCATCGGGAGGTACAAGGTGACGCACATGCCG CTCGTGCCGCCCATCATGGCGGCCATGGTCAGGGCCGCCGCGGCCGGCGGCGTGCCGCCG TCGCAGGTGGCCTCGCTGGTGCAGGTCTCGTGCGGCGCGGCTCCGATCACCGCCGCGCTC ATCCACGAATTCCTTCAGGCTTTCCCCCACGTCGACTTCATTCAGGGTTATGGCATGACA GAATCTACTGCCGTAGGAACTCGCGGATTTAACACTAGCAAGCACAAAAAGTATACCTCG GTAGGCCTTTTGGCCCCCAACATGCACGCCAAGATTGTTCATCTTGAGAGTAGTTCATGT TTGCCTCCAGGCTTCTCAGGGGAGCTATGGCTCCATGGCCCAGGAATCATGAAAGGTTAC TTGAGTGATGATGATGATGCCTGCACGAGAAAGGATGGCTGGTTGCGTACCGGAGACATT GCCTACTTTGATCTGGATGGCTACCTATACATTGTAGGCCGCTTGAAGGACACAATCAAG TACAAAGGATTTCAGATAGCTCCGGGGGACTTGGAAGAAGTTTTGATCCACCACCCTGAA ATTCTTGATGTTGCTGTGACATCTGCTGAGGATGAAGAAGCTGGAGAGATACCAGTAGCT TTTGTGGTGAGGAGATCTGGAAGCAACCTTTCTTGTAAGCAAGTGATGGAGTATGTGGCC AAGCAGGTTGCTCCATATAAGAGAGTGAGGAAGGTGGTATTTGTGGAGGCAATTCCCAAG TCACCTGCTGGAAAAGTTTTGAGGAGGCTTCTCAGGAACTCGCATGACACTGCTGCTGCT GCTACCTCTTCTTGCAGTATCAGCTCCAAGCTCTGA

Peptide Sequence

PEP ID	Os08t0143300-00
PEP Infomation	pep chromosome:IRGSP-1.0:8:2382108:2385161:1 gene:Os08g0143300 transcript:Os08t0143300-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:acyl-CoA synthetase 3 description:AMP-dependent synthetase and ligase domain containing protein. (Os08t0143300-00)
Sequence	MQRDAIAAARNAGCSSGRISQPPPPPFYSAATGIYSSIHPPVALPTDPSLTLVAHLFARL PLADPGAPTLVDAATASAVSRADLRRLVASLAAGLRRRHGVRKGSVVLLLLPNSVAFPVS FLAVLAAGAVATTMNPSSSPAEIAAQARATGACLVLASRDGAARLPPLAAPVVLVPEILD HSAAADDGDDDQRVFAAFRAMLDGGGGDGTETAVPVVGQDDAVAILYSSGTSGRSKGVVL THRNLIAMTELFVRFEASQYHARGARENVYMAALPMSHVYGLSLFAVGLLSIGATVVVMR RFDAGDAVAAIGRYKVTHMPLVPPIMAAMVRAAAAGGVPPSQVASLVQVSCGAAPITAAL IHEFLQAFPHVDFIQGYGMTESTAVGTRGFNTSKHKKYTSVGLLAPNMHAKIVHLESSSC LPPGFSGELWLHGPGIMKGYLSDDDDACTRKDGWLRTGDIAYFDLDGYLYIVGRLKDTIK YKGFQIAPGDLEEVLIHHPEILDVAVTSAEDEEAGEIPVAFVVRRSGSNLSCKQVMEYVA KQVAPYKRVRKVVFVEAIPKSPAGKVLRRLLRNSHDTAAAATSSCSISSKL

Transcript Sequence

Transcript ID	Os08t0143300-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:2382108:2385161:1 gene:Os08g0143300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:acyl-CoA synthetase 3 description:AMP-dependent synthetase and ligase domain containing protein. (Os08t0143300-00)
Sequence	ACGCCCCCACCACCGCCCTCGCCCTCGCCTCACTCTCCTCTCCGGCAATGCAGCGCGACG CGATCGCCGCCGCCCGGAACGCCGGCTGCTCGAGCGGCCGCATCTCGCAGCCGCCGCCGC CGCCGTTCTACTCCGCCGCCACCGGAATCTACAGCAGCATCCACCCTCCCGTGGCGCTCC CCACCGACCCCTCCCTCACCCTCGTCGCCCACCTCTTCGCCCGCCTCCCCCTCGCCGACC CGGGCGCCCCCACCCTCGTCGACGCCGCCACCGCGTCCGCGGTGTCCCGCGCCGACCTCC GCCGCCTCGTCGCCTCCCTCGCCGCGGGGCTCCGCCGCCGCCATGGCGTTCGGAAGGGGT CCGTTGTGCTGCTGCTCCTCCCGAACTCCGTCGCGTTCCCCGTCTCGTTCCTCGCCGTGC TCGCCGCCGGCGCCGTCGCCACCACCATGAACCCCTCCAGCTCCCCCGCCGAGATTGCCG CCCAGGCGCGGGCCACCGGCGCATGCCTCGTCCTCGCCTCGCGCGACGGCGCCGCGAGGC TCCCGCCTCTCGCTGCCCCCGTCGTCCTCGTGCCCGAAATCCTGGACCATTCCGCCGCGG CCGACGACGGCGACGACGACCAACGCGTGTTCGCCGCGTTCCGCGCCATGCTCGACGGCG GCGGCGGCGACGGCACCGAGACGGCGGTCCCGGTGGTGGGCCAGGACGACGCGGTGGCCA TCCTCTACTCGTCGGGGACGTCGGGGAGGAGCAAGGGGGTGGTGCTGACGCACCGCAACC TGATCGCCATGACGGAGCTGTTCGTCCGGTTCGAGGCGTCGCAGTACCACGCGCGAGGTG CTCGCGAAAATGTCTACATGGCGGCGCTGCCCATGTCCCACGTGTACGGCCTCTCCCTCT TCGCCGTCGGCCTCCTCTCGATCGGTGCCACGGTGGTGGTGATGAGGAGATTCGACGCCG GCGACGCCGTCGCCGCCATCGGGAGGTACAAGGTGACGCACATGCCGCTCGTGCCGCCCA TCATGGCGGCCATGGTCAGGGCCGCCGCGGCCGGCGGCGTGCCGCCGTCGCAGGTGGCCT CGCTGGTGCAGGTCTCGTGCGGCGCGGCTCCGATCACCGCCGCGCTCATCCACGAATTCC TTCAGGCTTTCCCCCACGTCGACTTCATTCAGGGTTATGGCATGACAGAATCTACTGCCG TAGGAACTCGCGGATTTAACACTAGCAAGCACAAAAAGTATACCTCGGTAGGCCTTTTGG CCCCCAACATGCACGCCAAGATTGTTCATCTTGAGAGTAGTTCATGTTTGCCTCCAGGCT TCTCAGGGGAGCTATGGCTCCATGGCCCAGGAATCATGAAAGGTTACTTGAGTGATGATG ATGATGCCTGCACGAGAAAGGATGGCTGGTTGCGTACCGGAGACATTGCCTACTTTGATC TGGATGGCTACCTATACATTGTAGGCCGCTTGAAGGACACAATCAAGTACAAAGGATTTC AGATAGCTCCGGGGGACTTGGAAGAAGTTTTGATCCACCACCCTGAAATTCTTGATGTTG CTGTGACATCTGCTGAGGATGAAGAAGCTGGAGAGATACCAGTAGCTTTTGTGGTGAGGA GATCTGGAAGCAACCTTTCTTGTAAGCAAGTGATGGAGTATGTGGCCAAGCAGGTTGCTC CATATAAGAGAGTGAGGAAGGTGGTATTTGTGGAGGCAATTCCCAAGTCACCTGCTGGAA AAGTTTTGAGGAGGCTTCTCAGGAACTCGCATGACACTGCTGCTGCTGCTACCTCTTCTT GCAGTATCAGCTCCAAGCTCTGA