Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0141700-02
CDS Infomation

cds chromosome:IRGSP-1.0:8:2322547:2323638:-1 gene:Os08g0141700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectinesterase inhibitor domain containing protein. (Os08t0141700-02)
Sequence

ATGGAGAGATCAGCCACCGTCTTTGTAGCGCTCACCTTGCTCGTCGCCGGCAGCGTCGTC
GTCGTCGTCGTCGTCGACGCCTGCGACGGCGTGCCGAGGATGTCGGCCGTGGAGGCGTGC
AAGCAGGCGAGCGTGGGCCCGGCCATGTCGCGGACGTGCGCCGAGACGCTGGGAACCTCG
GCGGACGAGCAGGGGGCGACGGACTTCATGGTGGCCGCCGCGAACGCCGCGACGGAGTCG
TACAAGGCTGGCAAGGAGGCCGTCGGCAAGGTGCTCTCCAACCCGCTGGCGCCCGACGGC
GAGCGGCTGCCGTGCCTCGTGTGCGCGAACAAGTACGACGACGCGTCGATGCTCGTCGCC
AGCACCGCCGACGACGCCAAGCGCTGCAAGCTGAGCGCCGACAGCCTCCCCGACCTCGTC
ACCGCCGTCTCTGCCGTCGACGAGTGCGCCACGAAGATGTTCGAGGAGAGCGGGAACACG
ACGTCGGTGTACGCCACGGCCATCACCAATCGGGATTGGACCGTGCTCGTTCTGCGCCTC
GCTACGTTGGTTGTGCCGCGCCAGCAACTCAGCTAG

Peptide Sequence

PEP ID

Os08t0141700-02
PEP Infomation

pep chromosome:IRGSP-1.0:8:2322547:2323638:-1 gene:Os08g0141700 transcript:Os08t0141700-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectinesterase inhibitor domain containing protein. (Os08t0141700-02)
Sequence

MERSATVFVALTLLVAGSVVVVVVVDACDGVPRMSAVEACKQASVGPAMSRTCAETLGTS
ADEQGATDFMVAAANAATESYKAGKEAVGKVLSNPLAPDGERLPCLVCANKYDDASMLVA
STADDAKRCKLSADSLPDLVTAVSAVDECATKMFEESGNTTSVYATAITNRDWTVLVLRL
ATLVVPRQQLS

Transcript Sequence

Transcript ID

Os08t0141700-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:2322547:2323638:-1 gene:Os08g0141700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectinesterase inhibitor domain containing protein. (Os08t0141700-02)
Sequence

AATCTATAAACAAACACTCAAGACAATTAACACGACAAATCATGGAGAGATCAGCCACCG
TCTTTGTAGCGCTCACCTTGCTCGTCGCCGGCAGCGTCGTCGTCGTCGTCGTCGTCGACG
CCTGCGACGGCGTGCCGAGGATGTCGGCCGTGGAGGCGTGCAAGCAGGCGAGCGTGGGCC
CGGCCATGTCGCGGACGTGCGCCGAGACGCTGGGAACCTCGGCGGACGAGCAGGGGGCGA
CGGACTTCATGGTGGCCGCCGCGAACGCCGCGACGGAGTCGTACAAGGCTGGCAAGGAGG
CCGTCGGCAAGGTGCTCTCCAACCCGCTGGCGCCCGACGGCGAGCGGCTGCCGTGCCTCG
TGTGCGCGAACAAGTACGACGACGCGTCGATGCTCGTCGCCAGCACCGCCGACGACGCCA
AGCGCTGCAAGCTGAGCGCCGACAGCCTCCCCGACCTCGTCACCGCCGTCTCTGCCGTCG
ACGAGTGCGCCACGAAGATGTTCGAGGAGAGCGGGAACACGACGTCGGTGTACGCCACGG
CCATCACCAATCGGGATTGGACCGTGCTCGTTCTGCGCCTCGCTACGTTGGTTGTGCCGC
GCCAGCAACTCAGCTAGTTCTGCCATGCATCACCAATCGTGCGATTGGATTGCTGGTCGC
CCTCCCTTGTCCTTCCTCGTTCTAAGGCCGTGTTTTGTTTCCCTCATATTCCCAACTTTC
CATCACATCAAAAGCTTTCCTACACTCATAAACTTTCAACTTTTTTTCCAAACTCCCATT
TCTTTAAACTTTCAACTTTTTTTAGGAACTAAACACACCCTAAATATGGCTGATATCAAG
CATTAAAAACTTTAGCTATGAATAAATTTTAAAATACTTACGTTAGAAACGTTGAGACCA
TATGTATAGACCAAATTTTTAATATATTTGTTGATGTTTTTTATATATTATATTGTACTA
GAAAAGATGCCCGTGTGTTGCAACGGGTGAAGCTATTTTAATCTTATTGTTGTTCAATGT
GATTCACTATGAGAATTCGCTTGGATATTTTTTTTTCTAGAAATTAATGTCAAGTTAACA
TTTGAGTTTTTT